We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ERBB3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.63
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.00011
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
40%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
56%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
327.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
224.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
211.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
197.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
173.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
171.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
170.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
165.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
165.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
162.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
148.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
143.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
139.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
133.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
132.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
128.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
126.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
123.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
119.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
118.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
118.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
117.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
116.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
105.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
105.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
103.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
103.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
101.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
101.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
99.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
98.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
96.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
96.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
96.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
95.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
95.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
94.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
94.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
94.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
94.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
94.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
94.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
93.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
92.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
92.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
91.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
91.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
91.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
90.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
88.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
88.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
86.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
86.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
85.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
84.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
84.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
84.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
84.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
84.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
83.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
83.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
83.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
82.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
82.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
82.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
81.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
81.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
79.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
79.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
79.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
77.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
77.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
77.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
76.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
76.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
76.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
76.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
76.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
76.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
76.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
75.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
75.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
75.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
74.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
74.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
72.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
72.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
72.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
71.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
70.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
70.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
70.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
70.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
69.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
69.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
69.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
69.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
68.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
68.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
67.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
67.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
67.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
67.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
67.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
67.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
67.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
66.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
66.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
66.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
66.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
66.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
65.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
65.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
65.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
64.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
63.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
63.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
63.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
62.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
62.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
62.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
62.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
62.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
61.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
61.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
61.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
61.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
60.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
59.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
59.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
59.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
59.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
58.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
58.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
58.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
58.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
58.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
58.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
57.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
57.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
57.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
57.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
57.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
57.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
56.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
56.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
56.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
55.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
55.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
55.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
55.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
55.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
55.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
54.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
54.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
54.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
54.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
54.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
54.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
54.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
54.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
53.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
53.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
53.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
53.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
53.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
53.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
53.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
53.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
52.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
52.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
52.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
52.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
52.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
52.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
51.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
51.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
51.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
51.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
51.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
51.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
51.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
50.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
50.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
50.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
49.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
49.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
49.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
49.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
48.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
48.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
48.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
48.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
48.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
48.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
47.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
47.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
46.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
46.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
46.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
46.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
46.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
46.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
46.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
46.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
46.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
45.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
45.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
45.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
45.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
45.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
45.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
45.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
45.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
45.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
44.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
44.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
44.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
44.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
44.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
44.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
44.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
44.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
43.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
43.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
43.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
43.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
43.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
43.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
42.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
42.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
42.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
42.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
42.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
42.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
42.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
42.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
41.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
41.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
41.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
41.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
41.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
41.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
41.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
41.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
40.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
40.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
40.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
40.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
40.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
40.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
39.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
39.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
39.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
38.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
38.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
38.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
38.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
38.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
37.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
37.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
37.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
37.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
37.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
37.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
37.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
37.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
36.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
36.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
36.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
36.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
36.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
36.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
36.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
36.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
36.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
36.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
36.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
36.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
35.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
35.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
34.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
34.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
34.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
34.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
33.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
33.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
32.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
32.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
32.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
32.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
32.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
31.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
31.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
31.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
30.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
30.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
30.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
30.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
30.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
29.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
29.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
29.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
29.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
29.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
29.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
28.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
28.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
28.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
28.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
28.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
27.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
27.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
27.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
27.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
27.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
26.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
26.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
26.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
26.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
26.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
26.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
26.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
25.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
25.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
25.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
25.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
25.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
25.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
25.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
25.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
25.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
23.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
22.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
22.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
22.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
22.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
21.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
21.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
18.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
18.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
17.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
15.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
13.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ERBB3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 2.14
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.0045
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
0%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
75%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.8
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
162.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
141.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
140.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
121.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
121.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
112.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
112.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
112.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
109.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
109.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
108.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
104.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
100.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
100.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
96.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
92.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
90.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
89.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
87.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
87.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
86.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
84.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
83.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
78.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
78.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
78.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
77.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
76.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
76.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
76.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
73.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
73.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
73.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
72.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
72.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
71.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
71.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
70.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
68.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
68.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
67.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
67.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
66.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
66.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
66.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
65.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
65.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
65.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
65.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
64.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
64.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
63.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
63.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
62.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
62.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
62.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
61.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
60.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
60.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
59.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
59.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
58.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
58.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
58.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
56.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
56.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
56.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
56.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
56.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
56.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
55.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
55.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
55.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
54.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
54.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
54.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
53.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
53.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
53.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
52.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
52.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
52.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
52.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
51.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
51.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
51.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
51.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
50.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
50.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
49.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
49.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
49.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
49.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
48.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
48.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
47.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
47.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
47.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
47.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
47.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
47.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
47.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
47.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
46.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
46.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
46.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
45.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
43.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
43.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
43.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
43.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
42.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
42.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
42.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
42.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
42.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
42.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
41.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
41.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
41.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
41.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
41.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
41.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
40.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
40.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
39.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
39.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
39.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
39.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
38.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
38.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
38.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
38.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
38.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
38.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
38.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
38.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
37.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
37.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
37.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
37.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
37.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
37.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
37.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
36.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
36.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
36.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
36.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
35.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
35.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
35.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
35.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
35.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
34.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
34.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
34.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
34.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
34.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
33.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
33.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
33.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
33.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
33.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
32.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
31.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
31.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
30.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
30.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
30.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
30.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
29.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
29.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
29.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
29.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
29.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
28.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
27.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
27.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
27.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
27.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
26.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
26.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
25.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
25.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
25.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
25.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
24.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
24.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
24.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
24.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
24.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
24.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
23.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
22.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
22.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
21.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
21.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
20.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
20.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
20.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
19.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
19.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
19.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
16.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
16.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
15.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
10.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
813
Tumor
1.2
533
Tumor
1.2
1013
Tumor
1.2
445
Tumor
1.1
385
Tumor
1.1
477
Tumor
1.1
112
Tumor
1.0
487
Tumor
1.0
425
Tumor
1.0
393
Tumor
1.0
977
Tumor
1.0
553
Tumor
0.9
343
Tumor
0.8
465
Tumor
0.8
413
Tumor
0.8
131
Tumor
0.8
267
Tumor
0.8
863
Tumor
0.7
431
Tumor
0.7
357
Tumor
0.7
741
Tumor
0.7
1041
Tumor
0.7
873
Tumor
0.7
517
Tumor
0.7
573
Tumor
0.6
695
Tumor
0.6
147
Tumor
0.6
715
Tumor
0.6
125
Tumor
0.5
635
Tumor
0.5
481
Tumor
0.5
867
Tumor
0.5
523
Tumor
0.5
427
Tumor
0.5
953
Tumor
0.5
785
Tumor
0.5
911
Tumor
0.5
861
Tumor
0.5
954
Normal
0.5
435
Tumor
0.4
361
Tumor
0.4
411
Tumor
0.4
433
Tumor
0.4
497
Tumor
0.4
493
Tumor
0.4
814
Normal
0.4
231
Tumor
0.4
981
Tumor
0.4
665
Tumor
0.3
951
Tumor
0.3
423
Tumor
0.3
367
Tumor
0.3
727
Tumor
0.3
387
Tumor
0.3
515
Tumor
0.3
713
Tumor
0.3
975
Tumor
0.3
557
Tumor
0.2
912
Normal
0.2
647
Tumor
0.2
925
Tumor
0.2
737
Tumor
0.2
185
Tumor
0.2
127
Tumor
0.2
391
Tumor
0.2
488
Normal
0.2
478
Normal
0.2
341
Tumor
0.2
615
Tumor
0.2
921
Tumor
0.2
1031
Tumor
0.2
1021
Tumor
0.1
672
Normal
0.1
365
Tumor
0.1
1027
Tumor
0.1
755
Tumor
0.1
186
Normal
0.1
967
Tumor
0.1
451
Tumor
0.1
944
Normal
0.1
538
Normal
0.1
484
Normal
0.1
471
Tumor
0.1
857
Tumor
0.1
483
Tumor
0.1
877
Tumor
0.1
375
Tumor
0.1
698
Normal
0.1
432
Normal
0.1
724
Normal
0.1
162
Normal
0.1
527
Tumor
0.1
368
Normal
0.1
883
Tumor
0.1
661
Tumor
0.1
132
Normal
0.1
313
Tumor
0.1
285
Tumor
0.1
1046
Normal
0.0
187
Tumor
0.0
494
Normal
0.0
297
Tumor
0.0
617
Tumor
0.0
546
Normal
0.0
535
Tumor
0.0
384
Normal
0.0
648
Normal
0.0
331
Tumor
0.0
142
Normal
0.0
744
Normal
0.0
513
Tumor
0.0
172
Normal
0.0
161
Tumor
0.0
685
Tumor
0.0
271
Tumor
0.0
448
Normal
0.0
666
Normal
0.0
468
Normal
0.0
135
Tumor
0.0
938
Normal
0.0
924
Normal
0.0
232
Normal
0.0
456
Normal
0.0
464
Normal
0.0
268
Normal
0.0
664
Normal
0.0
915
Tumor
0.0
376
Normal
0.0
686
Normal
0.0
415
Tumor
0.0
383
Tumor
0.0
344
Normal
0.0
671
Tumor
0.0
958
Normal
0.0
882
Normal
0.0
636
Normal
0.0
366
Normal
0.0
745
Tumor
-0.1
482
Normal
-0.1
392
Normal
-0.1
171
Tumor
-0.1
976
Normal
-0.1
498
Normal
-0.1
662
Normal
-0.1
1022
Normal
-0.1
466
Normal
-0.1
1014
Normal
-0.1
354
Normal
-0.1
955
Tumor
-0.1
714
Normal
-0.1
213
Tumor
-0.1
426
Normal
-0.1
964
Normal
-0.1
444
Normal
-0.1
878
Normal
-0.1
1045
Tumor
-0.1
261
Tumor
-0.1
351
Tumor
-0.1
696
Normal
-0.1
743
Tumor
-0.1
567
Tumor
-0.1
554
Normal
-0.1
534
Normal
-0.1
1032
Normal
-0.1
1042
Normal
-0.1
642
Normal
-0.1
452
Normal
-0.1
298
Normal
-0.1
922
Normal
-0.1
616
Normal
-0.1
492
Normal
-0.1
917
Tumor
-0.1
1043
Tumor
-0.1
148
Normal
-0.1
563
Tumor
-0.2
862
Normal
-0.2
572
Normal
-0.2
963
Tumor
-0.2
923
Tumor
-0.2
618
Normal
-0.2
428
Normal
-0.2
926
Normal
-0.2
558
Normal
-0.2
128
Normal
-0.2
191
Tumor
-0.2
311
Tumor
-0.2
258
Normal
-0.2
516
Normal
-0.2
446
Normal
-0.2
221
Tumor
-0.2
396
Normal
-0.2
342
Normal
-0.2
756
Normal
-0.2
136
Normal
-0.2
436
Normal
-0.2
332
Normal
-0.2
472
Normal
-0.2
943
Tumor
-0.2
818
Normal
-0.2
462
Normal
-0.2
395
Tumor
-0.2
786
Normal
-0.2
1028
Normal
-0.2
864
Normal
-0.2
627
Tumor
-0.2
388
Normal
-0.2
358
Normal
-0.2
858
Normal
-0.2
257
Tumor
-0.2
196
Normal
-0.2
124
Normal
-0.2
424
Normal
-0.2
916
Normal
-0.2
952
Normal
-0.2
314
Normal
-0.2
721
Tumor
-0.2
1044
Normal
-0.2
222
Normal
-0.2
443
Tumor
-0.2
146
Normal
-0.2
746
Normal
-0.2
824
Normal
-0.2
564
Normal
-0.2
778
Normal
-0.2
272
Normal
-0.2
815
Tumor
-0.2
874
Normal
-0.2
571
Tumor
-0.2
195
Tumor
-0.2
574
Normal
-0.2
113
Tumor
-0.2
722
Normal
-0.2
956
Normal
-0.2
262
Normal
-0.2
474
Normal
-0.3
568
Normal
-0.3
312
Normal
-0.3
328
Normal
-0.3
663
Tumor
-0.3
982
Normal
-0.3
467
Tumor
-0.3
394
Normal
-0.3
526
Normal
-0.3
984
Normal
-0.3
528
Normal
-0.3
1016
Normal
-0.3
884
Normal
-0.3
362
Normal
-0.3
965
Tumor
-0.3
278
Normal
-0.3
628
Normal
-0.3
1026
Normal
-0.3
913
Tumor
-0.3
868
Normal
-0.3
414
Normal
-0.3
777
Tumor
-0.3
968
Normal
-0.3
881
Tumor
-0.3
188
Normal
-0.3
447
Tumor
-0.3
141
Tumor
-0.3
852
Normal
-0.3
545
Tumor
-0.3
137
Tumor
-0.3
217
Tumor
-0.3
918
Normal
-0.3
524
Normal
-0.3
138
Normal
-0.3
386
Normal
-0.3
537
Tumor
-0.4
224
Normal
-0.4
514
Normal
-0.4
983
Tumor
-0.4
214
Normal
-0.4
284
Normal
-0.4
461
Tumor
-0.4
192
Normal
-0.4
716
Normal
-0.4
353
Tumor
-0.4
114
Normal
-0.4
434
Normal
-0.4
228
Normal
-0.4
518
Normal
-0.4
641
Tumor
-0.4
723
Tumor
-0.4
957
Tumor
-0.4
536
Normal
-0.4
738
Normal
-0.4
742
Normal
-0.4
851
Tumor
-0.4
123
Tumor
-0.4
422
Normal
-0.4
866
Normal
-0.4
823
Tumor
-0.4
364
Normal
-0.4
412
Normal
-0.4
728
Normal
-0.4
218
Normal
-0.4
816
Normal
-0.4
978
Normal
-0.4
352
Normal
-0.4
966
Normal
-0.5
356
Normal
-0.5
473
Tumor
-0.5
212
Normal
-0.5
817
Tumor
-0.5
145
Tumor
-0.5
697
Tumor
-0.5
111
Normal
-0.5
937
Tumor
-0.5
126
Normal
-0.5
463
Tumor
-0.5
416
Normal
-0.6
355
Tumor
-0.6
914
Normal
-0.6
525
Tumor
-0.6
277
Tumor
-0.6
1025
Tumor
-0.6
1015
Tumor
-0.7
227
Tumor
-0.7
455
Tumor
-0.7
286
Normal
-0.7
491
Tumor
-0.8
327
Tumor
-0.8
865
Tumor
-0.8
421
Tumor
-0.9
283
Tumor
-1.0
363
Tumor
-1.1
211
Tumor
-1.9
223
Tumor
-2.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.