HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.5 nTPM
HPA Brain:4.4 nTPM
GTEx:20.5 nTPM
FANTOM5:30.2 Scaled Tags Per Million
Pig:27.4 nTPM
Mouse:46.4 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 4.4
Sample id Sample description nTPM
Hippocampus
nTPM: 3.8
1898 Male, age 80, left hemisphere 4.7
2529 Female, age 94, left hemisphere 4.5
1911 Female, age 85, right hemisphere 4.1
2621 Female, age 67, right hemisphere 4.1
1855 Male, age 76, left hemisphere 2.7
2148 Female, age 91, left hemisphere 2.7
Dentate gyrus
nTPM: 3.7
2530 Female, age 94, left hemisphere 4.8
1927 Female, age 91, both hemispheres 4.1
2528 Male, age 74, both hemispheres 3.7
2531 Female, age 67, both hemispheres 3.6
2010 Male, age 76, both hemispheres 3.4
2246 Female, age 85, both hemispheres 2.5
Entorhinal gyrus
nTPM: 3.8
1787 Male, age 76, left hemisphere 4.2
1938 Female, age 85, left hemisphere 4.0
2764 Male, age 80, right hemisphere 3.9
2686 Male, age 75, right hemisphere 3.8
2117 Female, age 91, right hemisphere 3.7
2613 Female, age 94, left hemisphere 3.2
Hippocampus, CA1
nTPM: 4.0
2749 Male, age 80, left hemisphere 5.0
2045 Male, age 76, both hemispheres 4.0
2527 Male, age 74, both hemispheres 4.0
1873 Female, age 85, both hemispheres 3.7
2082 Female, age 91, right hemisphere 3.3
Hippocampus, CA2
nTPM: 4.4
1892 Male, age 76, both hemispheres 5.8
1940 Female, age 85, left hemisphere 4.5
1963 Male, age 80, left hemisphere 4.5
2437 Female, age 94, left hemisphere 4.1
2249 Male, age 74, both hemispheres 3.8
2113 Female, age 91, right hemisphere 3.5
Hippocampus, CA3
nTPM: 4.3
1867 Male, age 76, both hemispheres 6.2
2620 Female, age 94, left hemisphere 4.6
2137 Male, age 80, left hemisphere 4.2
1891 Female, age 85, both hemispheres 4.1
2436 Male, age 74, both hemispheres 3.6
2861 Female, age 67, both hemispheres 3.4
Parahippocampal cortex
nTPM: 3.7
1990 Female, age 91, right hemisphere 4.6
2692 Male, age 74, both hemispheres 4.6
2018 Male, age 76, both hemispheres 4.4
1850 Male, age 80, both hemispheres 4.0
2622 Female, age 67, right hemisphere 3.7
2250 Female, age 67, right hemisphere 3.4
2693 Female, age 94, both hemispheres 3.4
2532 Female, age 72, left hemisphere 3.3
2245 Female, age 91, both hemispheres 3.0
1933 Female, age 85, both hemispheres 2.7
Perirhinal gyrus
nTPM: 4.3
1841 Female, age 85, right hemisphere 5.5
1794 Male, age 80, right hemisphere 5.1
1847 Female, age 91, left hemisphere 4.6
2521 Female, age 94, right hemisphere 3.7
2848 Male, age 76, right hemisphere 2.6
Subiculum
nTPM: 3.6
2438 Female, age 94, left hemisphere 5.0
1901 Male, age 80, both hemispheres 4.4
2619 Male, age 74, both hemispheres 3.1
1977 Female, age 85, both hemispheres 3.0
2729 Female, age 91, right hemisphere 3.0
2042 Male, age 76, both hemispheres 2.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 32.5
Min nTPM: 11.9
Std nTPM: 3.2
Median nTPM: 20.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 28.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 26.7
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 26.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 26.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 26.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.2
FF:10153-102I9 76 years, female 31.4
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.4
Pig sample Sample description nTPM
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 29.1
Min nTPM: 18.2
Sample A Female 29.1
Sample B Female 20.3
Sample C Male 18.2
Sample D Male 20.4
Dorsal hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 32.6
Min nTPM: 24.1
Sample A Female 32.6
Sample B Female 24.1
Sample C Male 25.5
Sample D Male 27.4
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 30.6
Min nTPM: 25.1
Sample A Female 25.8
Sample B Female 30.6
Sample C Male 25.5
Sample D Male 25.1
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 25.0
Min nTPM: 20.9
Sample A Female 21.7
Sample B Female 20.9
Sample C Male 22.3
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 46.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 51.2
Min nTPM: 44.4
Sample A Male 44.9
Sample B Male 51.2
Sample C Female 45.1
Sample D Female 44.4
Hippocampal formation
nTPM: 46.2
Samples: 4

Max nTPM: 51.4
Min nTPM: 43.6
Sample A Male 51.4
Sample B Male 44.1
Sample C Female 45.7
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69816954 Antisense, RP_050510_02_C08, Mouse strain C57BL/6J (56 days, male) 2.4

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