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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
403.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
335.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
135.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
112.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
91.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
88.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
79.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
74.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
68.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
67.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
65.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
63.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
58.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
56.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
55.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
54.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
45.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
43.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
40.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
39.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
39.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
39.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
33.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
30.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
27.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
26.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
22.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
13.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
3.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
252.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
225.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
186.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
162.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
142.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
136.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
129.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
118.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
118.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
114.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
110.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
107.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
107.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
106.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
105.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
102.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
98.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
97.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
96.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
92.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
92.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
92.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
91.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
90.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
90.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
90.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
89.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
89.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
89.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
88.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
85.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
85.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
85.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
84.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
82.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
82.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
82.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
81.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
81.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
80.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
79.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
78.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
77.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
77.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
77.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
77.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
76.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
76.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
75.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
75.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
75.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
74.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
74.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
73.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
72.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
72.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
71.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
71.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
71.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
70.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
69.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
69.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
69.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
68.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
68.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
68.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
68.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
68.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
67.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
66.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
66.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
66.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
65.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
65.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
65.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
65.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
65.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
64.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
64.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
64.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
63.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
63.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
63.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
63.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
63.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
63.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
63.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
62.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
62.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
62.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
62.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
62.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
61.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
61.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
60.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
59.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
59.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
59.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
59.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
59.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
59.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
59.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
58.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
58.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
58.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
58.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
57.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
57.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
57.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
57.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
57.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
56.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
56.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
56.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
55.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
55.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
55.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
55.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
54.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
54.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
54.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
54.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
54.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
53.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
53.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
53.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
53.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
53.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
53.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
53.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
53.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
52.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
52.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
52.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
52.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
52.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
52.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
52.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
52.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
51.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
51.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
51.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
50.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
50.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
50.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
50.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
50.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
49.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
49.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
49.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
49.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
49.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
48.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
48.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
48.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
48.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
48.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
48.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
47.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
47.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
47.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
47.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
46.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
46.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
46.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
46.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
45.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
45.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
45.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
45.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
45.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
45.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
44.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
44.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
44.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
44.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
44.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
44.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
44.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
44.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
44.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
44.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
43.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
43.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
43.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
42.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
42.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
42.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
42.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
42.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
42.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
42.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
42.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
42.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
42.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
42.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
41.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
41.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
41.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
41.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
41.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
41.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
41.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
41.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
41.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
41.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
41.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
40.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
40.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
40.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
40.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
40.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
39.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
39.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
39.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
39.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
39.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
39.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
39.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
39.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
39.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
38.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
38.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
38.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
38.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
38.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
38.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
38.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
37.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
37.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
37.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
37.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
37.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
37.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
36.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
36.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
36.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
36.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
35.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
34.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
34.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
34.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
34.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
33.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
33.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
33.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
33.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
32.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
32.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
32.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
32.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
32.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
31.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
31.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
30.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
30.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
30.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
30.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
30.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
30.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
30.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
29.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
29.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
29.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
29.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
28.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
28.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
28.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
27.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
27.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
26.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
26.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
25.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
25.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
25.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
24.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
23.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
23.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
22.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
21.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
18.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
13.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
148.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
88.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
82.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
81.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
76.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
75.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
73.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
69.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
67.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
65.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
65.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
61.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
60.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
60.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
57.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
56.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
55.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
53.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
51.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
50.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
50.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
49.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
48.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
48.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
43.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
42.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
41.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
37.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
37.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
37.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
36.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
32.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
32.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
31.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
30.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
27.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
26.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
22.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
11.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
8.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
240.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
230.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
200.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
193.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
188.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
177.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
174.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
164.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
159.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
152.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
151.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
147.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
138.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
133.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
133.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
122.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
122.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
121.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
117.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
114.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
113.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
113.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
111.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
110.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
109.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
109.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
108.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
107.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
106.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
106.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
106.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
104.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
102.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
101.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
100.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
98.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
98.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
97.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
94.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
93.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
91.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
91.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
88.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
87.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
86.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
86.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
85.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
84.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
81.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
79.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
79.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
78.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
77.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
77.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
75.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
75.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
73.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
71.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
71.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
71.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
71.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
70.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
70.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
70.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
70.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
70.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
69.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
69.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
68.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
68.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
67.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
66.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
66.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
65.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
65.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
65.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
63.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
63.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
63.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
61.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
61.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
60.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
59.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
59.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
58.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
58.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
57.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
56.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
55.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
54.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
54.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
53.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
53.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
53.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
52.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
52.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
52.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
51.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
51.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
51.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
50.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
50.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
48.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
48.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
48.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
48.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
48.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
47.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
46.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
46.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
45.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
45.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
45.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
45.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
45.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
44.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
44.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
44.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
44.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
43.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
43.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
42.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
42.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
42.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
41.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
41.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
41.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
41.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
40.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
40.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
40.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
40.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
38.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
38.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
37.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
37.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
37.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
36.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
36.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
35.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
32.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
32.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
31.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
31.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
31.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
30.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
30.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
30.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
29.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
29.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
29.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
28.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
27.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
26.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
21.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
19.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
19.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
16.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
15.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
15.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017850003
Tumor
1.4
CPT0066480003
Tumor
1.3
CPT0084560003
Tumor
1.2
CPT0077320001
Normal
1.1
CPT0010120001
Normal
1.1
CPT0001270001
Normal
1.0
CPT0084590001
Normal
1.0
CPT0011240003
Tumor
1.0
CPT0000660001
Normal
1.0
CPT0092190003
Normal
0.9
CPT0086870003
Tumor
0.9
CPT0075170001
Normal
0.8
CPT0025170003
Tumor
0.7
CPT0063640001
Normal
0.7
CPT0088550004
Tumor
0.7
CPT0081990003
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0024680001
Normal
0.7
CPT0065820001
Normal
0.7
CPT0012670003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0023360001
Normal
0.6
CPT0079300001
Normal
0.5
CPT0007470001
Normal
0.5
CPT0088630003
Tumor
0.5
CPT0014130001
Normal
0.5
CPT0018250001
Normal
0.5
CPT0079510001
Normal
0.5
CPT0086830003
Normal
0.5
CPT0006530001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0081600003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0017450001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0001550001
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0002370001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0020130001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0012920003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0001180009
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0078530001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0065450001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0088690003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0012770003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0025230003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0012550003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0001350001
Normal
-0.4
CPT0014370004
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0000640003
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0026420001
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0006900003
Tumor
-0.6
CPT0066470004
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0064370003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0079270003
Tumor
-0.7
CPT0025580004
Tumor
-0.7
CPT0065750003
Tumor
-0.7
CPT0007860003
Tumor
-0.7
CPT0015810003
Tumor
-0.8
CPT0014450004
Tumor
-0.8
CPT0025350003
Tumor
-0.8
CPT0009000003
Tumor
-0.8
CPT0014160003
Tumor
-0.8
CPT0079480003
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0011410003
Tumor
-0.9
CPT0065810003
Tumor
-0.9
CPT0006630003
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0092290003
Tumor
-1.0
CPT0026410003
Tumor
-1.0
CPT0025110003
Tumor
-1.1
CPT0001500009
Tumor
-1.1
CPT0006440003
Tumor
-1.1
CPT0000870016
Tumor
-1.1
CPT0078830003
Tumor
-1.1
CPT0079180003
Tumor
-1.1
CPT0001340003
Tumor
-1.3
CPT0015730003
Tumor
-1.3
CPT0088970003
Tumor
-1.3
CPT0078800003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
