HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.4 nTPM
HPA Brain:49.8 nTPM
GTEx:44.4 nTPM
FANTOM5:127.8 Scaled Tags Per Million
Mouse:24.4 nTPM
Allen mouse:27.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.8
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1898 Male, age 80, left hemisphere 53.2
2529 Female, age 94, left hemisphere 50.3
1855 Male, age 76, left hemisphere 46.4
2148 Female, age 91, left hemisphere 46.1
1911 Female, age 85, right hemisphere 45.8
2621 Female, age 67, right hemisphere 40.4
Dentate gyrus
nTPM: 42.3
2530 Female, age 94, left hemisphere 46.5
2010 Male, age 76, both hemispheres 45.2
2528 Male, age 74, both hemispheres 44.8
2246 Female, age 85, both hemispheres 42.5
1927 Female, age 91, both hemispheres 40.6
2531 Female, age 67, both hemispheres 34.0
Entorhinal gyrus
nTPM: 49.8
2117 Female, age 91, right hemisphere 53.8
1938 Female, age 85, left hemisphere 50.9
2764 Male, age 80, right hemisphere 50.2
2613 Female, age 94, left hemisphere 49.8
1787 Male, age 76, left hemisphere 48.8
2686 Male, age 75, right hemisphere 45.2
Hippocampus, CA1
nTPM: 48.5
2749 Male, age 80, left hemisphere 62.9
2527 Male, age 74, both hemispheres 51.3
1873 Female, age 85, both hemispheres 46.8
2082 Female, age 91, right hemisphere 44.9
2045 Male, age 76, both hemispheres 36.3
Hippocampus, CA2
nTPM: 44.0
1963 Male, age 80, left hemisphere 51.4
2249 Male, age 74, both hemispheres 46.1
2113 Female, age 91, right hemisphere 44.6
1892 Male, age 76, both hemispheres 42.5
2437 Female, age 94, left hemisphere 40.8
1940 Female, age 85, left hemisphere 38.7
Hippocampus, CA3
nTPM: 42.9
2137 Male, age 80, left hemisphere 55.8
2436 Male, age 74, both hemispheres 42.2
1891 Female, age 85, both hemispheres 42.1
1867 Male, age 76, both hemispheres 40.9
2861 Female, age 67, both hemispheres 40.1
2620 Female, age 94, left hemisphere 36.4
Parahippocampal cortex
nTPM: 45.5
1933 Female, age 85, both hemispheres 50.6
2692 Male, age 74, both hemispheres 49.0
2622 Female, age 67, right hemisphere 48.7
2245 Female, age 91, both hemispheres 47.2
2532 Female, age 72, left hemisphere 46.3
1850 Male, age 80, both hemispheres 45.9
1990 Female, age 91, right hemisphere 45.6
2250 Female, age 67, right hemisphere 45.0
2693 Female, age 94, both hemispheres 39.3
2018 Male, age 76, both hemispheres 37.6
Perirhinal gyrus
nTPM: 46.7
1794 Male, age 80, right hemisphere 51.8
1847 Female, age 91, left hemisphere 51.3
1841 Female, age 85, right hemisphere 46.2
2521 Female, age 94, right hemisphere 44.0
2848 Male, age 76, right hemisphere 40.3
Subiculum
nTPM: 46.0
1901 Male, age 80, both hemispheres 49.3
1977 Female, age 85, both hemispheres 46.7
2619 Male, age 74, both hemispheres 46.2
2729 Female, age 91, right hemisphere 45.9
2438 Female, age 94, left hemisphere 45.6
2042 Male, age 76, both hemispheres 42.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.4
Samples: 197

Max nTPM: 75.7
Min nTPM: 10.7
Std nTPM: 10.1
Median nTPM: 43.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 75.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 72.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 71.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 70.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 68.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 67.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 66.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 66.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 64.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 127.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.8
FF:10169-103B7 60 years, female 168.2
FF:10153-102I9 76 years, female 87.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.2
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.4
Sample A Male 23.4
Sample B Male 25.4
Sample C Female 22.4
Sample D Female 25.5
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 27.6
Min nTPM: 21.9
Sample A Male 25.4
Sample B Male 21.9
Sample C Female 22.6
Sample D Female 27.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 27.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.3
199204 Antisense, RP_040604_02_D06, Mouse strain C57BL/6J (56 days, male) 27.3

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