We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.3
nTPM
HPA Brain:
54.9
nTPM
GTEx:
36.3
nTPM
FANTOM5:
140.5
Scaled Tags Per Million
Pig:
84.3
nTPM
Mouse:
78.1
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 52.1
1870
Female, age 42, unknown
54.4
1827
Male, age 72, unknown
53.5
2828
Female, age 72, unknown
53.5
1833
Male, age 53, unknown
53.1
2019
Male, age 18, unknown
52.6
2666
Male, age 74, left hemisphere
52.3
2411
Female, age 72, unknown
52.2
2586
Male, age 75, left hemisphere
51.5
1830
Male, age 51, unknown
49.9
2219
Male, age 76, both hemispheres
47.6
Dorsal raphe nucleus nTPM: 52.4
2298
Female, age 72, unknown
60.2
2750
Male, age 76, both hemispheres
52.5
2016
Female, age 72, unknown
51.3
1828
Male, age 53, unknown
50.1
2047
Male, age 72, unknown
47.8
Inferior colliculus nTPM: 48.9
2097
Female, age 72, unknown
51.1
2849
Male, age 72, unknown
49.7
1848
Female, age 42, unknown
48.5
1890
Male, age 53, unknown
46.3
Median raphe nucleus nTPM: 47.9
2220
Male, age 76, midline
47.9
Periaquaductal grey, anterior nTPM: 54.9
1795
Male, age 51, unknown
55.3
2502
Female, age 75, unknown
54.9
1947
Male, age 18, unknown
54.6
Periaquaductal grey, dorsal nTPM: 49.5
2850
Male, age 76, both hemispheres
53.1
1840
Male, age 53, unknown
51.1
1831
Male, age 72, unknown
48.9
2464
Female, age 72, unknown
44.8
Periaquaductal grey, lateral nTPM: 54.7
2272
Male, age 74, both hemispheres
60.5
2140
Male, age 76, both hemispheres
55.8
2053
Male, age 18, unknown
47.8
Pretectal area nTPM: 54.9
2273
Male, age 74, both hemispheres
61.2
2007
Male, age 72, unknown
57.7
1815
Male, age 53, unknown
55.9
1816
Male, age 51, unknown
55.2
1817
Female, age 42, unknown
55.2
2316
Male, age 76, right hemisphere
54.6
2667
Female, age 75, unknown
54.2
2224
Female, age 72, unknown
53.9
2407
Male, age 75, both hemispheres
53.5
1944
Female, age 72, unknown
51.4
2825
Male, age 18, unknown
51.4
Red nucleus nTPM: 53.5
2769
Male, age 72, unknown
56.2
2227
Male, age 72, unknown
56.1
2725
Female, age 75, unknown
55.6
1821
Female, age 72, unknown
55.1
2785
Male, age 18, unknown
54.8
1904
Male, age 53, unknown
54.6
1954
Female, age 42, unknown
53.7
1865
Male, age 51, unknown
53.6
2503
Female, age 72, unknown
51.6
2823
Male, age 76, right hemisphere
51.6
2588
Male, age 74, left hemisphere
50.3
2584
Male, age 75, left hemisphere
49.1
Substantia nigra nTPM: 49.7
1851
Male, age 51, unknown
55.0
1916
Female, age 42, unknown
54.5
2699
Male, age 18, unknown
53.6
1889
Female, age 72, unknown
53.0
2583
Male, age 75, right hemisphere
51.0
2590
Female, age 75, unknown
49.3
2665
Male, age 74, both hemispheres
49.2
1941
Male, age 53, unknown
49.1
2241
Male, age 72, unknown
41.4
2409
Female, age 72, unknown
41.4
Superior colliculus nTPM: 53.2
2261
Male, age 18, unknown
58.0
1995
Male, age 72, unknown
57.6
1796
Male, age 53, unknown
55.6
1913
Female, age 42, unknown
54.7
2087
Female, age 72, unknown
52.7
1895
Male, age 76, right hemisphere
52.2
2668
Female, age 75, unknown
51.9
2587
Male, age 74, left hemisphere
50.0
2664
Male, age 75, both hemispheres
49.8
1839
Male, age 51, unknown
49.7
Ventral tegmental area nTPM: 49.5
2223
Female, age 72, unknown
50.8
1915
Female, age 42, unknown
50.3
2218
Male, age 76, both hemispheres
50.3
1942
Male, age 51, unknown
49.0
2410
Female, age 72, unknown
48.8
2021
Male, age 53, unknown
47.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 36.3
Samples: 139
Max nTPM: 65.4
Min nTPM: 22.1
Std nTPM: 5.2
Median nTPM: 35.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
65.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
50.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
49.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
47.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
46.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
45.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
45.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
44.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
44.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
43.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
43.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
43.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
42.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
42.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
42.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
41.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
41.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
41.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
41.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
41.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
41.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
40.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
40.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
40.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
40.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
39.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
39.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
39.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
39.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
39.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
39.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
39.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
39.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
38.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
38.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
38.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
38.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
38.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
38.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
38.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
38.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
38.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
38.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
38.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
38.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
37.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
37.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
37.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
37.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
37.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
37.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
37.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
37.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
37.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
36.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
36.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
36.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
36.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
36.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
36.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
36.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
36.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
36.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
36.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
36.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
36.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
36.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
36.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
35.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
35.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
35.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
35.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
35.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
35.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
35.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
35.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
35.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
35.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
35.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
35.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
35.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
34.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
34.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
34.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
34.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
34.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
34.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
34.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
34.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
34.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
34.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
34.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
34.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
34.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
34.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
34.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
33.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
33.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
33.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
33.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
33.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
33.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
33.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
33.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
33.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
33.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
32.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
32.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
32.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
32.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
32.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
32.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
32.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
32.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
32.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
32.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
32.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
32.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
31.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
31.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
31.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
31.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
31.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
31.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
30.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
30.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
30.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
30.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
30.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
30.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
30.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
30.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
29.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
28.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
27.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
27.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
27.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
24.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
22.1
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.