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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
168.5
nTPM
FANTOM5:
18.7
Scaled Tags Per Million
Pig:
112.6
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
168.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 166.4
2188
Female, age 91, both hemispheres
183.3
2090
Male, age 80, both hemispheres
167.3
2301
Female, age 85, both hemispheres
163.5
1984
Male, age 76, both hemispheres
151.4
Dorsal cochlear nucleus nTPM: 168.3
2802
Male, age 74, right hemisphere
215.3
2378
Male, age 80, both hemispheres
182.2
2187
Female, age 91, both hemispheres
175.9
2370
Male, age 61, both hemispheres
142.3
2058
Male, age 76, both hemispheres
125.7
Dorsal tegmental nucleus nTPM: 153.8
2326
Male, age 74, both hemispheres
181.5
2083
Male, age 80, both hemispheres
169.6
2358
Male, age 61, both hemispheres
144.0
1936
Male, age 76, left hemisphere
120.2
Dorsolateral tegmental area nTPM: 160.7
2337
Male, age 61, both hemispheres
193.2
2654
Male, age 80, both hemispheres
177.4
2751
Female, age 85, both hemispheres
162.8
2360
Male, age 74, both hemispheres
150.5
2141
Male, age 76, both hemispheres
119.5
Kolliker-Fuse nucleus nTPM: 165.7
2793
Female, age 91, left hemisphere
183.6
2315
Male, age 76, right hemisphere
174.5
2163
Male, age 80, both hemispheres
139.0
Lateral lemniscal nuclei nTPM: 153.5
2746
Female, age 85, left hemisphere
177.9
2169
Male, age 76, both hemispheres
176.8
2320
Female, age 91, left hemisphere
140.0
2453
Male, age 74, right hemisphere
137.3
2036
Male, age 80, both hemispheres
135.4
Lateral parabrachial nucleus nTPM: 162.4
2013
Male, age 80, both hemispheres
195.4
2792
Male, age 76, both hemispheres
179.1
2139
Female, age 85, right hemisphere
167.6
2790
Male, age 61, both hemispheres
107.7
Lateral vestibular nucleus nTPM: 149.7
2311
Male, age 80, both hemispheres
173.4
2184
Male, age 76, both hemispheres
126.1
Locus coeruleus nTPM: 137.9
2720
Male, age 74, both hemispheres
172.4
2014
Male, age 55, unknown
143.7
2123
Female, age 91, both hemispheres
141.2
2788
Male, age 74, unknown
139.0
2317
Female, age 72, unknown
137.5
2162
Male, age 80, both hemispheres
131.1
1980
Male, age 76, both hemispheres
100.2
Medial parabrachial nucleus nTPM: 150.9
2170
Female, age 91, both hemispheres
190.5
2854
Male, age 80, both hemispheres
169.6
2463
Female, age 85, right hemisphere
152.9
2786
Male, age 76, both hemispheres
124.1
2156
Male, age 61, both hemispheres
117.2
Medial periolivary nuclei nTPM: 158.7
2063
Male, age 76, both hemispheres
197.7
2081
Male, age 80, both hemispheres
164.8
2171
Female, age 85, both hemispheres
150.5
2791
Male, age 74, right hemisphere
140.9
2458
Female, age 91, both hemispheres
139.5
Motor facial nucleus nTPM: 158.8
2795
Female, age 91, both hemispheres
173.5
2062
Male, age 76, both hemispheres
172.0
2365
Male, age 74, right hemisphere
166.1
2697
Female, age 85, both hemispheres
165.7
2126
Male, age 61, both hemispheres
155.6
2327
Male, age 80, both hemispheres
119.7
Motor trigeminal nucleus nTPM: 140.4
2321
Female, age 91, both hemispheres
152.3
2560
Male, age 74, both hemispheres
142.2
2309
Male, age 76, both hemispheres
138.3
2335
Male, age 61, both hemispheres
134.8
2079
Male, age 80, both hemispheres
134.5
Nuclei of the trapezoid body nTPM: 156.1
1983
Male, age 76, both hemispheres
197.6
2159
Male, age 61, both hemispheres
165.2
2166
Male, age 80, both hemispheres
142.4
2735
Female, age 85, both hemispheres
138.6
2368
Female, age 91, both hemispheres
136.9
Nucleus raphe magnus nTPM: 152.3
2160
Male, age 61, both hemispheres
190.5
2051
Male, age 76, both hemispheres
163.3
2172
Female, age 85, both hemispheres
146.2
2328
Male, age 80, both hemispheres
140.6
2459
Female, age 91, both hemispheres
140.0
2455
Male, age 74, both hemispheres
132.9
Paramedian reticular nucleus nTPM: 151.8
2050
Female, age 85, both hemispheres
162.4
2052
Male, age 76, both hemispheres
157.1
2057
Male, age 80, both hemispheres
146.0
2313
Male, age 61, both hemispheres
141.8
Pedunculopontine tegmental nucleus nTPM: 156.3
2338
Male, age 61, both hemispheres
177.1
2334
Male, age 80, both hemispheres
156.3
1921
Female, age 85, both hemispheres
135.4
Pontine nuclei nTPM: 168.5
1863
Male, age 55, unknown
189.9
2787
Female, age 85, both hemispheres
187.4
2727
Male, age 61, right hemisphere
181.3
2319
Female, age 91, both hemispheres
177.8
1968
Male, age 76, left hemisphere
167.1
2109
Female, age 72, unknown
154.7
2115
Male, age 80, left hemisphere
148.2
2454
Male, age 74, left hemisphere
141.3
Pontine raphe nucleus nTPM: 145.3
2122
Female, age 85, midline
151.3
2853
Male, age 76, midline
139.3
Posteroventral cochlear nucleus nTPM: 168.3
2341
Male, age 80, both hemispheres
206.7
2135
Female, age 91, both hemispheres
192.3
2371
Male, age 61, both hemispheres
157.3
2070
Male, age 76, both hemispheres
143.7
2752
Female, age 85, both hemispheres
141.5
Principal sensory trigeminal nucleus nTPM: 142.3
2367
Female, age 91, left hemisphere
164.3
2158
Male, age 61, both hemispheres
161.1
2324
Male, age 76, both hemispheres
123.8
2008
Male, age 80, left hemisphere
120.1
Reticular pontine nucleus, caudal nTPM: 152.9
2092
Male, age 76, both hemispheres
187.0
2457
Female, age 91, both hemispheres
156.6
2559
Male, age 74, both hemispheres
154.8
2332
Male, age 80, right hemisphere
113.3
Reticular pontine nucleus, oral nTPM: 157.5
2366
Female, age 91, both hemispheres
173.3
1939
Male, age 80, both hemispheres
161.4
2012
Female, age 85, both hemispheres
155.7
2361
Male, age 74, both hemispheres
150.3
2167
Male, age 76, both hemispheres
146.6
Reticulotegmental nucleus nTPM: 151.0
2322
Female, age 91, both hemispheres
160.8
2452
Male, age 74, both hemispheres
159.0
2325
Male, age 76, both hemispheres
147.3
2333
Male, age 80, both hemispheres
137.0
Spinal trigeminal nucleus, oral nTPM: 128.7
2164
Male, age 80, both hemispheres
138.9
1978
Male, age 76, both hemispheres
127.1
2737
Female, age 85, both hemispheres
120.1
Subcoeruleus area nTPM: 155.5
2369
Female, age 85, left hemisphere
176.7
2451
Male, age 74, both hemispheres
172.8
1958
Male, age 80, both hemispheres
150.2
2323
Female, age 91, left hemisphere
140.3
2089
Male, age 76, left hemisphere
137.6
Superior olive nTPM: 156.9
2020
Male, age 76, both hemispheres
177.0
1875
Female, age 85, both hemispheres
176.5
2561
Female, age 91, both hemispheres
153.1
2364
Male, age 74, right hemisphere
144.2
2329
Male, age 80, right hemisphere
133.5
Ventral periolivary nuclei nTPM: 163.3
2023
Male, age 76, both hemispheres
200.1
2165
Male, age 80, both hemispheres
153.7
2794
Female, age 91, left hemisphere
149.9
2130
Female, age 85, both hemispheres
149.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 155.1
2840
Female, age 85, both hemispheres
173.6
1959
Male, age 76, both hemispheres
166.1
2359
Male, age 61, both hemispheres
159.1
2161
Male, age 80, both hemispheres
154.3
2456
Female, age 91, both hemispheres
146.7
2449
Male, age 74, both hemispheres
130.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
