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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPBP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
78.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
60.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
58.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
57.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
56.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
56.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
56.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
53.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
52.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
51.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
50.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
49.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
49.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
49.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
48.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
48.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
47.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
45.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
44.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
44.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
44.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
43.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
43.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
42.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
40.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
40.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
40.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
40.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
39.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
39.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
39.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
39.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
39.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
38.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
38.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
38.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
37.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
37.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
37.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
37.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
37.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
36.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
36.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
36.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
36.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
36.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
36.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
36.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
35.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
35.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
35.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
35.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
35.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
35.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
35.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
35.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
34.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
34.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
34.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
34.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
34.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
34.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
34.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
33.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
33.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
33.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
33.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
33.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
32.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
32.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
32.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
32.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
32.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
32.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
32.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
32.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
32.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
32.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
31.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
31.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
31.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
31.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
31.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
31.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
31.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
31.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
30.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
30.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
30.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
30.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
30.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
30.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
29.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
29.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
29.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
29.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
29.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
29.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
29.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
29.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
28.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
28.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
28.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
28.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
28.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
28.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
28.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
28.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
27.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
27.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
27.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
27.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
27.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
27.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
27.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
27.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
27.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
27.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
27.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
27.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
27.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
27.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
27.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
26.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
26.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
26.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
26.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
26.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
26.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
26.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
26.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
26.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
26.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
25.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
25.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
25.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
25.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
25.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
25.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
25.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
25.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
25.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
25.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
25.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
25.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
25.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
24.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
24.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
24.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
24.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
24.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
24.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
24.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
24.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
24.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
24.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
24.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
24.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
24.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
24.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
23.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
23.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
23.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
23.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
23.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
23.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
23.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
23.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
22.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
22.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
22.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
22.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
22.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
22.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
22.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
22.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
22.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
22.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
21.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
21.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
21.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
21.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
21.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
21.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
21.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
21.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
21.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
21.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
21.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
21.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
20.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
20.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
20.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
20.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
20.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
20.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
20.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
20.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
19.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
19.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
19.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
19.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
19.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
19.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
19.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
19.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
19.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
19.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
18.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
18.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
18.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
18.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
18.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
18.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
18.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
18.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
17.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
17.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
17.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
17.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
17.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
17.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
17.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
17.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
16.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
16.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
16.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
16.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
15.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
15.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
15.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
15.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
15.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
14.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
14.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
14.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
14.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
14.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
13.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
12.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
12.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
11.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
11.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPBP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
231
Samples
Sample
Description
TPM
DO23521
0 years, male, NA, stage:3, alive, 1110 days
152.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
85.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
46.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
45.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
44.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
41.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
41.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
40.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
39.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
38.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
37.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
37.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
36.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
36.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
34.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
34.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
33.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
33.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
33.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
33.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
33.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
32.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
32.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
32.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
31.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
31.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
30.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
30.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
29.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
29.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
29.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
28.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
28.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
28.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
28.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
27.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
27.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
27.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
27.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
26.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
26.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
26.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
26.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
26.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
25.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
25.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
25.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
24.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
24.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
24.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
24.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
24.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
24.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
24.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
23.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
23.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
23.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
23.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
23.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
23.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
23.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
22.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
22.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
22.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
22.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
22.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
22.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
22.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
22.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
22.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
22.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
22.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
22.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
21.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
21.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
21.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
21.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
21.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
21.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
21.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
21.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
20.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
20.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
20.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
20.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
20.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
20.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
20.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
20.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
20.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
20.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
20.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
20.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
20.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
20.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
20.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
19.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
19.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
19.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
19.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
19.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
19.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
19.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
19.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
19.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
19.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
19.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
19.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
19.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
18.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
18.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
18.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
18.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
18.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
18.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
17.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
17.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
17.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
17.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
17.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
16.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
16.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
16.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
15.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
15.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
15.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
15.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
14.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
8.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
921
Tumor
0.8
917
Tumor
0.8
951
Tumor
0.6
743
Tumor
0.6
737
Tumor
0.6
497
Tumor
0.5
923
Tumor
0.5
814
Normal
0.5
523
Tumor
0.4
211
Tumor
0.4
227
Tumor
0.4
686
Normal
0.4
695
Tumor
0.4
715
Tumor
0.4
285
Tumor
0.4
937
Tumor
0.4
925
Tumor
0.4
513
Tumor
0.3
524
Normal
0.3
953
Tumor
0.3
813
Tumor
0.3
721
Tumor
0.2
526
Normal
0.2
515
Tumor
0.2
525
Tumor
0.2
916
Normal
0.2
368
Normal
0.2
943
Tumor
0.2
956
Normal
0.2
722
Normal
0.2
983
Tumor
0.2
514
Normal
0.2
361
Tumor
0.2
918
Normal
0.2
716
Normal
0.1
713
Tumor
0.1
224
Normal
0.1
981
Tumor
0.1
212
Normal
0.1
696
Normal
0.1
517
Tumor
0.1
938
Normal
0.1
724
Normal
0.1
283
Tumor
0.1
494
Normal
0.1
516
Normal
0.1
926
Normal
0.0
727
Tumor
0.0
1015
Tumor
0.0
493
Tumor
0.0
518
Normal
0.0
955
Tumor
0.0
362
Normal
0.0
492
Normal
0.0
367
Tumor
0.0
487
Tumor
0.0
728
Normal
0.0
376
Normal
0.0
978
Normal
0.0
488
Normal
0.0
483
Tumor
0.0
286
Normal
0.0
498
Normal
0.0
922
Normal
0.0
954
Normal
-0.1
384
Normal
-0.1
714
Normal
-0.1
223
Tumor
-0.1
977
Tumor
-0.1
491
Tumor
-0.1
915
Tumor
-0.1
984
Normal
-0.1
755
Tumor
-0.1
365
Tumor
-0.1
746
Normal
-0.1
366
Normal
-0.1
228
Normal
-0.1
777
Tumor
-0.1
924
Normal
-0.2
383
Tumor
-0.2
484
Normal
-0.2
1016
Normal
-0.2
375
Tumor
-0.2
786
Normal
-0.2
723
Tumor
-0.3
756
Normal
-0.3
952
Normal
-0.3
742
Normal
-0.3
284
Normal
-0.3
982
Normal
-0.3
744
Normal
-0.4
685
Tumor
-0.4
1014
Normal
-0.4
1013
Tumor
-0.4
778
Normal
-0.4
944
Normal
-0.5
745
Tumor
-0.5
738
Normal
-0.5
741
Tumor
-0.6
785
Tumor
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
142
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
957
Tumor
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
963
Tumor
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
864
Normal
N/A
1045
Tumor
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
423
Tumor
N/A
665
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
344
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
