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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.8
nTPM
HPA Brain:
175.7
nTPM
GTEx:
48.8
nTPM
FANTOM5:
66.4
Scaled Tags Per Million
Pig:
52.4
nTPM
Mouse:
70.3
nTPM
Allen mouse:
0.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
175.7
Sample id
Sample description
nTPM
Amygdala nTPM: 113.9
2517
Female, age 94, left hemisphere
118.7
2814
Male, age 76, right hemisphere
117.1
1987
Female, age 91, left hemisphere
114.6
2514
Male, age 75, right hemisphere
113.6
2695
Female, age 67, right hemisphere
105.2
Basal amygdala nTPM: 175.7
2827
Female, age 67, right hemisphere
262.5
2685
Female, age 94, left hemisphere
191.4
2609
Male, age 75, right hemisphere
173.8
2243
Female, age 91, right hemisphere
158.1
2110
Male, age 80, left hemisphere
151.9
1955
Male, age 76, both hemispheres
116.4
Central amygdala nTPM: 156.2
2826
Female, age 94, left hemisphere
223.0
2239
Male, age 80, left hemisphere
153.2
2701
Female, age 91, right hemisphere
153.2
2515
Male, age 75, right hemisphere
137.7
1905
Male, age 76, both hemispheres
113.7
Corticomedial amygdala nTPM: 152.9
2535
Female, age 67, right hemisphere
249.5
2829
Male, age 80, left hemisphere
150.3
2428
Male, age 75, right hemisphere
144.2
2242
Female, age 91, right hemisphere
142.7
2429
Female, age 94, left hemisphere
135.0
2240
Male, age 76, both hemispheres
95.5
Lateral amygdala nTPM: 168.2
2830
Female, age 67, right hemisphere
203.1
2256
Male, age 80, left hemisphere
184.5
2534
Female, age 94, left hemisphere
182.7
2255
Female, age 91, right hemisphere
172.8
2516
Male, age 75, right hemisphere
141.4
1883
Male, age 76, both hemispheres
124.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 48.8
Samples: 152
Max nTPM: 90.0
Min nTPM: 11.2
Std nTPM: 17.0
Median nTPM: 48.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
90.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
88.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
86.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
80.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
78.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
77.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
76.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
75.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
74.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
73.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
73.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
73.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
72.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
72.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
71.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
71.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
71.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
70.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
70.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
69.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
69.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
69.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
68.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
68.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
67.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
65.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
64.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
64.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
64.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
63.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
62.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
62.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
62.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
62.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
62.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
62.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
61.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
61.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
60.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
59.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
59.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
59.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
58.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
57.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
57.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
56.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
56.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
56.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
56.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
54.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
54.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
54.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
54.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
53.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
53.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
53.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
52.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
51.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
51.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
50.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
49.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
49.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
49.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
49.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
48.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
47.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
47.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
46.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
46.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
46.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
45.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
45.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
44.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
44.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
44.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
44.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
43.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
43.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
42.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
41.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
40.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
40.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
39.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
39.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
39.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
39.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
38.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
38.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
38.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
38.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
37.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
37.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
37.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
37.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
36.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
36.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
35.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
35.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
33.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
33.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
33.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
32.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
31.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
31.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
31.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
30.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
29.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
28.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
27.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
27.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
27.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
27.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
27.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
26.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
26.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
25.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
25.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
25.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
23.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
22.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
21.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
21.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
18.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
18.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
16.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
13.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
11.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
70.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 70.3
Samples: 4
Max nTPM: 81.0
Min nTPM: 63.8
Sample A
Male
68.5
Sample B
Male
67.9
Sample C
Female
81.0
Sample D
Female
63.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.