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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFSWAP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
28.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
27.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
15.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
11.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFSWAP is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
25.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
22.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
20.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
17.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
17.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
16.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
15.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
14.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
13.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
12.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
11.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
10.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
10.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
10.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
10.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
9.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
9.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
9.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
7.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
7.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
7.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
6.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
6.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
6.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
6.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
5.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
5.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
4.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFSWAP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
34.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
23.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
22.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
19.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
17.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
16.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
15.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
14.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
13.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SFSWAP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
51.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
47.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
29.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
27.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
26.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
25.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
23.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
22.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
22.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
21.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
18.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
16.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
16.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
15.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
15.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
15.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
14.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
13.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
13.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
12.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
10.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
8.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
7.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
7.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
7.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
4.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
0.7
CPT0012550003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0026410003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0078510003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0085670003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0011240003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0014370004
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0012280003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088570001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0006950001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0000640003
Tumor
-0.2
CPT0012570003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0019130003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0012090003
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0078800003
Tumor
-0.4
CPT0001350001
Normal
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
