HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:3.9 nTPM
HPA Brain:30.3 nTPM
GTEx:3.9 nTPM
FANTOM5:33.8 Scaled Tags Per Million
Pig:12.4 nTPM
Mouse:24.0 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055801
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
2148 Female, age 91, left hemisphere 30.3
2621 Female, age 67, right hemisphere 30.1
1855 Male, age 76, left hemisphere 28.3
2529 Female, age 94, left hemisphere 27.5
1898 Male, age 80, left hemisphere 25.7
1911 Female, age 85, right hemisphere 22.7
Dentate gyrus
nTPM: 28.0
2530 Female, age 94, left hemisphere 34.5
2531 Female, age 67, both hemispheres 30.1
2528 Male, age 74, both hemispheres 29.0
2010 Male, age 76, both hemispheres 25.9
2246 Female, age 85, both hemispheres 25.0
1927 Female, age 91, both hemispheres 23.7
Entorhinal gyrus
nTPM: 30.3
2613 Female, age 94, left hemisphere 42.7
2764 Male, age 80, right hemisphere 32.4
1787 Male, age 76, left hemisphere 29.4
2686 Male, age 75, right hemisphere 29.1
1938 Female, age 85, left hemisphere 24.7
2117 Female, age 91, right hemisphere 23.8
Hippocampus, CA1
nTPM: 24.0
2527 Male, age 74, both hemispheres 26.8
1873 Female, age 85, both hemispheres 25.3
2749 Male, age 80, left hemisphere 25.3
2082 Female, age 91, right hemisphere 23.9
2045 Male, age 76, both hemispheres 18.7
Hippocampus, CA2
nTPM: 26.1
2113 Female, age 91, right hemisphere 29.1
1963 Male, age 80, left hemisphere 28.9
2437 Female, age 94, left hemisphere 26.4
2249 Male, age 74, both hemispheres 24.4
1892 Male, age 76, both hemispheres 24.1
1940 Female, age 85, left hemisphere 23.6
Hippocampus, CA3
nTPM: 24.1
2620 Female, age 94, left hemisphere 30.6
2861 Female, age 67, both hemispheres 30.2
1867 Male, age 76, both hemispheres 22.5
2436 Male, age 74, both hemispheres 22.2
1891 Female, age 85, both hemispheres 21.8
2137 Male, age 80, left hemisphere 17.1
Parahippocampal cortex
nTPM: 27.4
2622 Female, age 67, right hemisphere 35.9
2692 Male, age 74, both hemispheres 33.5
2532 Female, age 72, left hemisphere 30.7
1990 Female, age 91, right hemisphere 30.3
2245 Female, age 91, both hemispheres 27.5
1850 Male, age 80, both hemispheres 24.2
1933 Female, age 85, both hemispheres 23.5
2018 Male, age 76, both hemispheres 22.9
2250 Female, age 67, right hemisphere 22.6
2693 Female, age 94, both hemispheres 22.6
Perirhinal gyrus
nTPM: 24.6
1794 Male, age 80, right hemisphere 26.7
1847 Female, age 91, left hemisphere 26.6
2521 Female, age 94, right hemisphere 26.3
2848 Male, age 76, right hemisphere 23.1
1841 Female, age 85, right hemisphere 20.4
Subiculum
nTPM: 27.3
2438 Female, age 94, left hemisphere 38.5
2619 Male, age 74, both hemispheres 30.7
2729 Female, age 91, right hemisphere 25.3
1977 Female, age 85, both hemispheres 23.9
2042 Male, age 76, both hemispheres 23.6
1901 Male, age 80, both hemispheres 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 11.4
Min nTPM: 1.0
Std nTPM: 1.9
Median nTPM: 3.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 11.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 10.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 9.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 8.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 7.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 7.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 7.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 7.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 7.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 7.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.8
FF:10153-102I9 76 years, female 37.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.4
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.1
Sample A Female 14.4
Sample B Female 12.1
Sample C Male 11.9
Sample D Male 10.1
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.1
Sample A Female 11.1
Sample B Female 11.6
Sample C Male 9.1
Sample D Male 9.8
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.0
Sample C Male 13.6
Sample D Male 10.6
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.9
Sample A Female 11.3
Sample B Female 11.3
Sample C Male 16.2
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 23.9
Sample C Female 25.2
Sample D Female 24.6
Hippocampal formation
nTPM: 22.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 19.3
Sample A Male 21.9
Sample B Male 25.4
Sample C Female 19.3
Sample D Female 22.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
69353209 Antisense, RP_050412_01_H01, Mouse strain C57BL/6J (56 days, male) 3.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org