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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
109.5
nTPM
HPA Brain:
76.7
nTPM
GTEx:
109.5
nTPM
FANTOM5:
88.8
Scaled Tags Per Million
Pig:
82.5
nTPM
Mouse:
88.4
nTPM
Allen mouse:
3.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.7
Sample id
Sample description
nTPM
Amygdala nTPM: 74.9
1987
Female, age 91, left hemisphere
83.2
2814
Male, age 76, right hemisphere
83.1
2514
Male, age 75, right hemisphere
73.3
2517
Female, age 94, left hemisphere
71.2
2695
Female, age 67, right hemisphere
63.7
Basal amygdala nTPM: 74.4
2110
Male, age 80, left hemisphere
89.3
2685
Female, age 94, left hemisphere
80.1
2243
Female, age 91, right hemisphere
79.9
1955
Male, age 76, both hemispheres
74.0
2609
Male, age 75, right hemisphere
65.1
2827
Female, age 67, right hemisphere
58.2
Central amygdala nTPM: 72.9
2239
Male, age 80, left hemisphere
85.0
1905
Male, age 76, both hemispheres
72.7
2701
Female, age 91, right hemisphere
72.0
2826
Female, age 94, left hemisphere
70.0
2515
Male, age 75, right hemisphere
64.8
Corticomedial amygdala nTPM: 76.7
2829
Male, age 80, left hemisphere
96.0
2429
Female, age 94, left hemisphere
89.3
2240
Male, age 76, both hemispheres
73.0
2242
Female, age 91, right hemisphere
72.3
2428
Male, age 75, right hemisphere
68.9
2535
Female, age 67, right hemisphere
60.4
Lateral amygdala nTPM: 72.4
1883
Male, age 76, both hemispheres
81.6
2534
Female, age 94, left hemisphere
80.1
2516
Male, age 75, right hemisphere
74.6
2256
Male, age 80, left hemisphere
70.0
2255
Female, age 91, right hemisphere
68.3
2830
Female, age 67, right hemisphere
60.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
109.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 109.5
Samples: 152
Max nTPM: 260.7
Min nTPM: 44.3
Std nTPM: 35.5
Median nTPM: 101.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
260.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
245.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
219.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
191.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
188.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
182.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
173.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
172.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
170.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
166.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
165.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
165.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
163.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
154.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
153.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
153.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
151.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
151.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
147.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
144.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
143.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
142.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
142.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
141.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
140.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
140.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
139.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
139.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
137.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
137.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
137.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
133.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
133.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
133.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
133.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
132.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
132.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
131.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
130.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
129.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
126.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
124.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
122.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
121.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
121.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
121.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
120.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
120.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
120.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
118.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
118.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
118.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
118.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
117.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
116.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
115.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
114.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
114.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
113.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
112.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
112.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
111.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
110.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
110.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
109.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
108.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
108.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
108.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
108.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
105.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
105.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
104.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
104.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
103.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
101.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
101.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
101.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
101.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
101.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
101.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
100.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
100.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
100.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
99.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
99.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
99.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
99.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
99.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
98.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
96.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
96.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
95.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
95.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
95.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
95.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
94.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
93.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
93.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
92.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
91.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
91.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
90.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
90.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
88.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
87.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
87.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
87.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
86.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
86.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
85.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
84.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
84.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
83.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
83.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
83.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
83.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
83.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
82.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
82.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
82.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
80.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
79.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
78.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
78.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
77.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
77.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
77.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
76.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
76.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
76.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
75.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
74.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
74.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
74.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
72.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
72.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
71.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
70.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
69.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
68.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
68.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
66.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
66.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
65.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
64.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
61.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
60.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
56.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
55.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
44.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 88.4
Samples: 4
Max nTPM: 96.7
Min nTPM: 82.2
Sample A
Male
96.7
Sample B
Male
88.4
Sample C
Female
86.4
Sample D
Female
82.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.