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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL17RB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
316.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
247.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
166.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
133.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
123.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
114.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
99.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
96.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
95.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
89.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
79.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
79.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
78.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
78.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
71.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
69.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
66.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
65.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
62.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
62.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
61.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
55.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
54.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
53.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
53.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
53.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
52.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
52.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
51.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
50.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
49.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
48.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
48.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
48.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
48.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
47.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
47.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
46.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
45.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
44.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
43.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
43.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
42.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
42.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
42.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
41.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
41.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
41.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
41.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
41.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
41.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
41.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
40.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
40.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
40.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
39.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
39.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
38.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
37.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
36.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
35.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
35.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
34.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
34.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
34.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
33.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
33.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
33.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
33.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
32.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
32.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
32.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
31.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
31.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
31.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
30.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
30.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
30.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
30.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
29.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
29.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
29.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
29.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
29.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
28.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
28.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
28.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
27.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
27.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
26.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
26.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
26.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
26.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
26.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
26.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
25.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
25.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
25.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
25.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
25.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
24.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
24.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
24.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
24.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
24.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
24.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
24.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
24.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
24.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
24.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
23.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
23.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
23.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
23.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
23.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
22.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
22.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
22.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
22.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
22.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
21.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
21.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
21.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
21.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
21.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
21.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
21.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
21.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
20.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
20.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
19.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
19.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
19.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
19.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
19.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
19.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
18.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
18.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
18.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
18.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
17.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
16.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
16.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
16.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
16.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
15.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
15.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
15.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
15.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
15.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
14.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
13.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
13.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
13.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
13.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
12.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
12.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
12.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
10.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
10.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
9.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
8.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
8.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
7.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
6.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
4.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL17RB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.4
Number of samples
231
Samples
Sample
Description
TPM
DO45105
0 years, male, NA, stage:1, alive, 1680 days
224.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
223.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
197.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
190.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
176.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
172.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
171.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
171.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
167.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
153.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
146.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
142.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
124.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
120.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
111.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
107.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
104.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
102.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
100.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
100.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
99.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
97.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
97.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
97.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
93.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
90.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
89.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
88.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
87.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
87.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
81.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
78.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
77.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
77.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
75.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
75.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
73.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
72.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
70.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
70.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
68.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
66.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
66.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
66.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
63.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
62.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
62.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
62.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
61.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
61.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
60.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
60.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
59.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
59.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
57.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
56.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
56.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
55.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
55.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
53.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
53.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
53.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
52.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
51.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
51.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
51.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
50.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
50.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
49.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
48.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
48.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
47.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
47.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
47.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
46.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
46.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
44.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
43.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
43.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
43.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
42.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
42.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
42.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
41.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
41.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
40.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
40.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
40.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
40.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
39.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
39.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
39.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
38.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
37.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
37.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
37.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
37.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
36.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
35.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
35.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
35.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
35.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
35.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
34.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
34.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
34.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
33.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
32.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
32.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
32.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
32.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
32.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
31.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
31.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
31.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
30.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
30.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
30.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
30.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
30.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
30.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
29.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
29.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
29.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
29.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
28.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
28.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
28.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
28.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
28.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
27.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
27.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
27.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
27.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
27.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
27.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
26.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
26.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
26.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
26.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
25.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
25.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
25.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
25.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
25.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
24.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
24.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
23.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
23.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
22.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
22.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
21.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
21.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
20.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
20.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
19.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
19.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
19.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
19.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
19.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
19.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
18.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
18.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
18.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
17.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
16.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
16.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
13.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
11.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
277
Tumor
1.2
954
Normal
1.2
314
Normal
1.1
953
Tumor
0.8
445
Tumor
0.8
415
Tumor
0.8
113
Tumor
0.7
814
Normal
0.7
332
Normal
0.7
813
Tumor
0.7
411
Tumor
0.7
423
Tumor
0.6
278
Normal
0.6
956
Normal
0.5
312
Normal
0.5
355
Tumor
0.5
191
Tumor
0.5
363
Tumor
0.4
298
Normal
0.4
416
Normal
0.3
221
Tumor
0.3
955
Tumor
0.3
313
Tumor
0.3
424
Normal
0.3
937
Tumor
0.3
297
Tumor
0.2
864
Normal
0.2
865
Tumor
0.2
414
Normal
0.2
331
Tumor
0.2
427
Tumor
0.2
867
Tumor
0.1
964
Normal
0.1
873
Tumor
0.1
195
Tumor
0.1
866
Normal
0.1
422
Normal
0.1
217
Tumor
0.1
428
Normal
0.1
868
Normal
0.1
364
Normal
0.1
356
Normal
0.1
327
Tumor
0.0
862
Normal
0.0
963
Tumor
0.0
746
Normal
0.0
443
Tumor
0.0
328
Normal
0.0
412
Normal
0.0
426
Normal
0.0
756
Normal
0.0
958
Normal
-0.1
444
Normal
-0.1
976
Normal
-0.1
111
Normal
-0.1
951
Tumor
-0.1
434
Normal
-0.1
222
Normal
-0.1
112
Tumor
-0.1
863
Tumor
-0.1
128
Normal
-0.2
413
Tumor
-0.2
861
Tumor
-0.2
874
Normal
-0.2
196
Normal
-0.2
421
Tumor
-0.2
432
Normal
-0.2
435
Tumor
-0.2
431
Tumor
-0.2
446
Normal
-0.3
127
Tumor
-0.3
938
Normal
-0.3
124
Normal
-0.3
433
Tumor
-0.3
425
Tumor
-0.3
786
Normal
-0.3
944
Normal
-0.4
436
Normal
-0.4
311
Tumor
-0.4
778
Normal
-0.4
126
Normal
-0.4
967
Tumor
-0.4
192
Normal
-0.5
123
Tumor
-0.5
975
Tumor
-0.5
114
Normal
-0.5
218
Normal
-0.6
755
Tumor
-0.6
968
Normal
-0.6
777
Tumor
-0.6
966
Normal
-0.6
952
Normal
-0.7
957
Tumor
-0.7
214
Normal
-0.7
785
Tumor
-0.8
943
Tumor
-0.8
213
Tumor
-0.8
698
Normal
-0.9
965
Tumor
-0.9
745
Tumor
-1.0
125
Tumor
-1.3
448
Normal
-1.5
1044
Normal
-1.6
1046
Normal
-1.7
1045
Tumor
-1.7
1043
Tumor
-1.9
697
Tumor
-2.4
536
Normal
-2.4
447
Tumor
-2.5
535
Tumor
-2.9
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
487
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
983
Tumor
N/A
742
Normal
N/A
984
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
533
Tumor
N/A
534
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
545
Tumor
N/A
666
Normal
N/A
546
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
455
Tumor
N/A
456
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
342
Normal
N/A
463
Tumor
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
