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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CUL1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
90.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
67.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
61.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
57.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
56.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
54.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
52.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
51.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
50.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
47.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
47.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
47.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
45.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
43.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
42.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
42.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
42.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
42.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
41.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
41.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
40.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
40.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
39.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
39.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
39.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
38.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
38.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
38.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
38.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
37.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
37.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
37.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
37.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
36.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
36.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
36.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
36.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
35.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
35.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
35.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
34.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
34.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
34.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
34.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
33.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
33.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
33.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
33.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
33.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
33.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
33.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
32.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
32.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
32.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
32.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
32.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
32.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
31.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
31.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
31.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
30.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
30.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
30.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
30.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
29.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
29.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
29.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
29.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
29.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
29.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
28.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
28.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
28.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
28.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
28.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
28.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
28.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
28.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
28.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
28.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
27.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
27.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
27.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
27.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
26.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
26.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
26.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
26.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
26.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
26.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
25.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
25.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
25.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
25.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
25.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
25.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
25.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
25.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
25.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
24.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
24.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
24.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
24.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
24.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
24.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
24.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
24.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
24.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
23.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
23.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
23.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
23.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
23.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
23.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
23.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
22.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
22.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
22.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
22.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
22.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
22.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
22.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
21.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
21.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
21.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
21.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
21.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
21.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
21.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
20.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
20.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
20.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
20.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
20.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
20.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
20.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
20.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
20.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
20.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
20.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
19.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
19.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
19.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
19.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
19.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
19.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
19.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
19.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
19.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
18.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
18.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
18.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
18.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
18.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
18.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
18.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
18.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
18.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
18.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
17.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
17.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
17.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
17.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
17.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
17.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
17.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
16.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
16.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
16.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
16.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
16.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
16.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
15.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
15.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
15.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
15.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
15.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
15.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
15.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
14.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
14.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
13.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
13.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
13.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
13.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
12.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
11.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
11.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CUL1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.0
Number of samples
231
Samples
Sample
Description
TPM
DO50798
0 years, male, NA, stage:3, dead, 30 days
83.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
75.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
73.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
56.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
53.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
50.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
49.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
47.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
46.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
46.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
44.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
43.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
42.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
42.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
41.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
41.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
40.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
39.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
39.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
39.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
39.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
38.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
38.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
37.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
37.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
36.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
35.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
35.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
35.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
35.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
35.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
34.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
34.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
34.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
34.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
33.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
33.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
33.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
33.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
32.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
32.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
32.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
32.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
32.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
31.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
31.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
31.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
31.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
31.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
30.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
30.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
30.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
30.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
30.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
30.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
30.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
30.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
29.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
28.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
28.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
28.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
28.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
28.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
28.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
27.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
27.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
27.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
27.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
27.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
27.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
27.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
26.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
26.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
26.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
26.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
26.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
26.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
26.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
26.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
25.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
25.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
25.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
25.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
25.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
25.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
25.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
25.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
25.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
25.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
24.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
24.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
24.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
24.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
24.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
24.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
24.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
24.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
24.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
24.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
24.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
23.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
23.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
23.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
23.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
23.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
23.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
23.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
23.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
23.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
23.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
22.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
22.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
22.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
22.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
22.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
22.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
22.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
22.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
22.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
21.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
21.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
21.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
21.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
21.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
21.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
20.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
20.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
20.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
20.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
19.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
19.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
19.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
19.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
19.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
19.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
19.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
18.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
18.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
17.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
17.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
17.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
17.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
17.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
16.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
16.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
15.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
15.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
14.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
0.9
925
Tumor
0.8
477
Tumor
0.6
327
Tumor
0.6
525
Tumor
0.5
497
Tumor
0.4
915
Tumor
0.4
493
Tumor
0.4
465
Tumor
0.4
955
Tumor
0.4
1021
Tumor
0.4
483
Tumor
0.4
951
Tumor
0.4
387
Tumor
0.3
965
Tumor
0.3
743
Tumor
0.3
727
Tumor
0.3
937
Tumor
0.3
953
Tumor
0.3
517
Tumor
0.3
1013
Tumor
0.3
113
Tumor
0.3
1027
Tumor
0.3
944
Normal
0.3
755
Tumor
0.2
563
Tumor
0.2
527
Tumor
0.2
685
Tumor
0.2
484
Normal
0.2
911
Tumor
0.2
328
Normal
0.2
473
Tumor
0.2
123
Tumor
0.2
261
Tumor
0.2
534
Normal
0.2
546
Normal
0.2
715
Tumor
0.2
557
Tumor
0.2
472
Normal
0.2
351
Tumor
0.2
815
Tumor
0.2
943
Tumor
0.2
481
Tumor
0.2
535
Tumor
0.2
523
Tumor
0.2
137
Tumor
0.2
777
Tumor
0.2
518
Normal
0.2
443
Tumor
0.2
964
Normal
0.2
785
Tumor
0.2
212
Normal
0.2
966
Normal
0.2
647
Tumor
0.2
448
Normal
0.2
967
Tumor
0.2
1022
Normal
0.2
425
Tumor
0.2
513
Tumor
0.1
1045
Tumor
0.1
957
Tumor
0.1
746
Normal
0.1
1028
Normal
0.1
1046
Normal
0.1
923
Tumor
0.1
313
Tumor
0.1
665
Tumor
0.1
361
Tumor
0.1
231
Tumor
0.1
756
Normal
0.1
494
Normal
0.1
474
Normal
0.1
482
Normal
0.1
414
Normal
0.1
952
Normal
0.1
127
Tumor
0.1
956
Normal
0.1
938
Normal
0.1
865
Tumor
0.1
412
Normal
0.1
537
Tumor
0.1
554
Normal
0.1
661
Tumor
0.1
695
Tumor
0.1
873
Tumor
0.1
615
Tumor
0.1
515
Tumor
0.1
355
Tumor
0.1
391
Tumor
0.1
697
Tumor
0.1
446
Normal
0.1
954
Normal
0.1
883
Tumor
0.1
223
Tumor
0.1
723
Tumor
0.1
416
Normal
0.1
356
Normal
0.1
413
Tumor
0.1
728
Normal
0.1
742
Normal
0.1
128
Normal
0.1
395
Tumor
0.1
977
Tumor
0.1
415
Tumor
0.1
228
Normal
0.1
136
Normal
0.1
1026
Normal
0.1
918
Normal
0.1
864
Normal
0.1
877
Tumor
0.1
488
Normal
0.1
492
Normal
0.1
824
Normal
0.1
778
Normal
0.1
526
Normal
0.1
924
Normal
0.1
1032
Normal
0.1
436
Normal
0.1
698
Normal
0.1
514
Normal
0.1
466
Normal
0.1
696
Normal
0.1
471
Tumor
0.1
461
Tumor
0.1
663
Tumor
0.1
341
Tumor
0.1
913
Tumor
0.1
431
Tumor
0.1
364
Normal
0.1
1015
Tumor
0.1
926
Normal
0.1
738
Normal
0.1
375
Tumor
0.1
558
Normal
0.1
567
Tumor
0.1
423
Tumor
0.1
455
Tumor
0.1
978
Normal
0.1
462
Normal
0.1
968
Normal
0.1
981
Tumor
0.1
162
Normal
0.1
428
Normal
0.1
262
Normal
0.1
867
Tumor
0.1
922
Normal
0.1
724
Normal
0.1
445
Tumor
0.1
878
Normal
0.1
487
Tumor
0.0
491
Tumor
0.0
187
Tumor
0.0
714
Normal
0.0
271
Tumor
0.0
312
Normal
0.0
916
Normal
0.0
498
Normal
0.0
284
Normal
0.0
314
Normal
0.0
863
Tumor
0.0
272
Normal
0.0
786
Normal
0.0
478
Normal
0.0
1044
Normal
0.0
573
Tumor
0.0
648
Normal
0.0
451
Tumor
0.0
114
Normal
0.0
958
Normal
0.0
388
Normal
0.0
111
Normal
0.0
432
Normal
0.0
816
Normal
0.0
464
Normal
0.0
686
Normal
0.0
1014
Normal
0.0
191
Tumor
0.0
1041
Tumor
0.0
132
Normal
0.0
353
Tumor
0.0
963
Tumor
0.0
721
Tumor
0.0
857
Tumor
0.0
145
Tumor
0.0
131
Tumor
0.0
516
Normal
0.0
524
Normal
0.0
211
Tumor
0.0
528
Normal
0.0
434
Normal
0.0
142
Normal
0.0
411
Tumor
0.0
332
Normal
0.0
227
Tumor
0.0
365
Tumor
0.0
862
Normal
0.0
1042
Normal
0.0
858
Normal
0.0
424
Normal
0.0
568
Normal
0.0
148
Normal
0.0
421
Tumor
0.0
722
Normal
0.0
1016
Normal
0.0
232
Normal
0.0
456
Normal
0.0
196
Normal
0.0
172
Normal
0.0
217
Tumor
0.0
435
Tumor
0.0
538
Normal
0.0
298
Normal
0.0
186
Normal
0.0
278
Normal
0.0
161
Tumor
0.0
536
Normal
0.0
866
Normal
0.0
716
Normal
0.0
258
Normal
0.0
126
Normal
0.0
882
Normal
0.0
572
Normal
0.0
627
Tumor
0.0
984
Normal
0.0
396
Normal
0.0
874
Normal
0.0
297
Tumor
0.0
422
Normal
0.0
618
Normal
0.0
1031
Tumor
0.0
141
Tumor
0.0
188
Normal
0.0
195
Tumor
0.0
376
Normal
0.0
664
Normal
0.0
635
Tumor
0.0
976
Normal
0.0
171
Tumor
0.0
286
Normal
0.0
468
Normal
0.0
564
Normal
0.0
426
Normal
0.0
982
Normal
0.0
852
Normal
0.0
222
Normal
0.0
662
Normal
0.0
362
Normal
0.0
545
Tumor
-0.1
616
Normal
-0.1
818
Normal
-0.1
394
Normal
-0.1
224
Normal
-0.1
617
Tumor
-0.1
433
Tumor
-0.1
213
Tumor
-0.1
737
Tumor
-0.1
713
Tumor
-0.1
393
Tumor
-0.1
917
Tumor
-0.1
427
Tumor
-0.1
851
Tumor
-0.1
914
Normal
-0.1
628
Normal
-0.1
283
Tumor
-0.1
745
Tumor
-0.1
342
Normal
-0.1
452
Normal
-0.1
146
Normal
-0.1
868
Normal
-0.1
268
Normal
-0.1
285
Tumor
-0.1
331
Tumor
-0.1
267
Tumor
-0.1
861
Tumor
-0.1
147
Tumor
-0.1
354
Normal
-0.1
1043
Tumor
-0.1
357
Tumor
-0.1
912
Normal
-0.1
386
Normal
-0.1
214
Normal
-0.1
392
Normal
-0.1
218
Normal
-0.1
138
Normal
-0.1
444
Normal
-0.1
125
Tumor
-0.1
884
Normal
-0.1
983
Tumor
-0.1
823
Tumor
-0.1
124
Normal
-0.1
366
Normal
-0.1
744
Normal
-0.1
447
Tumor
-0.1
642
Normal
-0.1
553
Tumor
-0.1
1025
Tumor
-0.1
363
Tumor
-0.1
311
Tumor
-0.1
352
Normal
-0.1
185
Tumor
-0.1
344
Normal
-0.1
641
Tumor
-0.1
672
Normal
-0.1
813
Tumor
-0.1
192
Normal
-0.1
385
Tumor
-0.1
636
Normal
-0.1
358
Normal
-0.1
881
Tumor
-0.1
368
Normal
-0.2
975
Tumor
-0.2
257
Tumor
-0.2
384
Normal
-0.2
666
Normal
-0.2
814
Normal
-0.2
741
Tumor
-0.2
221
Tumor
-0.2
671
Tumor
-0.2
367
Tumor
-0.2
921
Tumor
-0.2
277
Tumor
-0.2
112
Tumor
-0.2
574
Normal
-0.2
571
Tumor
-0.3
467
Tumor
-0.3
383
Tumor
-0.3
135
Tumor
-0.3
463
Tumor
-0.3
817
Tumor
-0.3
343
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
