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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC17 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
126.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
84.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
57.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
42.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
42.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
41.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
40.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
38.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
36.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
36.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
36.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
34.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
33.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
33.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
32.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
31.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
31.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
31.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
31.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
31.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
31.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
30.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
30.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
30.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
29.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
29.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
29.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
28.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
28.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
28.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
28.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
27.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
26.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
26.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
25.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
25.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
25.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
24.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
24.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
24.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
24.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
24.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
23.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
23.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
23.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
23.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
22.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
22.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
22.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
21.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
21.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
21.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
21.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
21.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
21.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
21.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
21.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
21.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
21.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
20.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
20.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
20.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
20.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
20.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
20.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
20.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
20.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
19.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
19.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
19.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
19.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
17.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
17.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
17.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
17.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
17.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
17.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
16.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
16.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
16.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
16.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
15.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
15.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
15.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
15.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
14.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
14.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
14.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
13.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
13.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
9.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
8.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC17 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
231
Samples
Sample
Description
TPM
DO50850
0 years, male, NA, stage:3, alive, 720 days
35.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
32.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
31.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
31.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
30.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
29.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
29.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
28.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
28.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
27.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
27.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
26.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
26.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
26.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
25.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
25.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
25.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
24.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
24.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
24.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
24.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
24.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
23.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
23.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
23.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
23.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
22.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
22.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
22.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
21.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
21.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
21.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
21.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
21.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
21.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
21.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
20.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
20.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
20.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
19.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
19.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
19.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
18.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
18.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
18.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
17.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
17.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
16.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
16.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
16.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
16.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
16.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
16.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
16.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
16.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
16.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
16.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
16.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
15.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
15.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
15.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
15.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
15.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
15.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
15.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
14.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
14.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
14.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
14.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
14.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
13.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
12.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
9.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
0.8
411
Tumor
0.7
351
Tumor
0.7
937
Tumor
0.6
965
Tumor
0.6
171
Tumor
0.6
527
Tumor
0.5
227
Tumor
0.5
473
Tumor
0.5
865
Tumor
0.5
983
Tumor
0.4
285
Tumor
0.4
147
Tumor
0.4
957
Tumor
0.4
823
Tumor
0.4
467
Tumor
0.4
813
Tumor
0.4
463
Tumor
0.4
523
Tumor
0.4
131
Tumor
0.4
355
Tumor
0.4
1013
Tumor
0.4
1025
Tumor
0.4
721
Tumor
0.4
851
Tumor
0.4
363
Tumor
0.4
745
Tumor
0.4
697
Tumor
0.3
545
Tumor
0.3
727
Tumor
0.3
367
Tumor
0.3
277
Tumor
0.3
857
Tumor
0.3
713
Tumor
0.3
517
Tumor
0.3
877
Tumor
0.3
918
Normal
0.3
723
Tumor
0.3
963
Tumor
0.3
123
Tumor
0.3
724
Normal
0.3
125
Tumor
0.3
464
Normal
0.3
533
Tumor
0.3
451
Tumor
0.3
481
Tumor
0.2
1016
Normal
0.2
923
Tumor
0.2
375
Tumor
0.2
982
Normal
0.2
393
Tumor
0.2
558
Normal
0.2
944
Normal
0.2
395
Tumor
0.2
368
Normal
0.2
698
Normal
0.2
228
Normal
0.2
1046
Normal
0.2
737
Tumor
0.2
283
Tumor
0.2
341
Tumor
0.2
113
Tumor
0.2
161
Tumor
0.2
554
Normal
0.2
314
Normal
0.2
535
Tumor
0.2
926
Normal
0.2
777
Tumor
0.2
257
Tumor
0.2
536
Normal
0.2
1045
Tumor
0.2
447
Tumor
0.2
984
Normal
0.2
922
Normal
0.2
953
Tumor
0.2
1014
Normal
0.2
343
Tumor
0.2
388
Normal
0.2
852
Normal
0.2
557
Tumor
0.2
617
Tumor
0.2
212
Normal
0.2
383
Tumor
0.2
487
Tumor
0.2
534
Normal
0.2
284
Normal
0.2
524
Normal
0.2
981
Tumor
0.2
386
Normal
0.2
136
Normal
0.2
217
Tumor
0.2
1015
Tumor
0.1
232
Normal
0.1
553
Tumor
0.1
192
Normal
0.1
431
Tumor
0.1
484
Normal
0.1
267
Tumor
0.1
1027
Tumor
0.1
528
Normal
0.1
1043
Tumor
0.1
223
Tumor
0.1
391
Tumor
0.1
427
Tumor
0.1
435
Tumor
0.1
286
Normal
0.1
978
Normal
0.1
635
Tumor
0.1
917
Tumor
0.1
958
Normal
0.1
967
Tumor
0.1
976
Normal
0.1
187
Tumor
0.1
353
Tumor
0.1
482
Normal
0.1
478
Normal
0.1
665
Tumor
0.1
742
Normal
0.1
145
Tumor
0.1
955
Tumor
0.1
966
Normal
0.1
298
Normal
0.1
686
Normal
0.1
162
Normal
0.1
1042
Normal
0.1
362
Normal
0.1
573
Tumor
0.1
938
Normal
0.1
392
Normal
0.1
331
Tumor
0.1
884
Normal
0.1
366
Normal
0.1
696
Normal
0.1
364
Normal
0.1
498
Normal
0.1
148
Normal
0.1
916
Normal
0.1
968
Normal
0.1
572
Normal
0.1
396
Normal
0.1
135
Tumor
0.1
1026
Normal
0.1
1044
Normal
0.1
472
Normal
0.1
278
Normal
0.1
671
Tumor
0.1
421
Tumor
0.1
188
Normal
0.1
647
Tumor
0.1
425
Tumor
0.1
494
Normal
0.1
874
Normal
0.1
546
Normal
0.1
738
Normal
0.1
746
Normal
0.1
878
Normal
0.1
468
Normal
0.1
436
Normal
0.1
1041
Tumor
0.1
332
Normal
0.1
211
Tumor
0.1
492
Normal
0.1
361
Tumor
0.1
785
Tumor
0.1
951
Tumor
0.1
452
Normal
0.1
672
Normal
0.1
224
Normal
0.1
172
Normal
0.1
537
Tumor
0.1
778
Normal
0.1
567
Tumor
0.1
448
Normal
0.1
525
Tumor
0.0
728
Normal
0.0
818
Normal
0.0
455
Tumor
0.0
1021
Tumor
0.0
954
Normal
0.0
357
Tumor
0.0
313
Tumor
0.0
715
Tumor
0.0
574
Normal
0.0
1022
Normal
0.0
186
Normal
0.0
526
Normal
0.0
142
Normal
0.0
516
Normal
0.0
514
Normal
0.0
497
Tumor
0.0
271
Tumor
0.0
493
Tumor
0.0
474
Normal
0.0
312
Normal
0.0
861
Tumor
0.0
466
Normal
0.0
413
Tumor
0.0
415
Tumor
0.0
356
Normal
0.0
817
Tumor
0.0
538
Normal
0.0
1028
Normal
0.0
882
Normal
0.0
858
Normal
0.0
568
Normal
0.0
925
Tumor
0.0
943
Tumor
0.0
868
Normal
0.0
258
Normal
0.0
221
Tumor
0.0
755
Tumor
0.0
195
Tumor
0.0
434
Normal
0.0
627
Tumor
0.0
412
Normal
0.0
191
Tumor
0.0
344
Normal
0.0
964
Normal
0.0
138
Normal
0.0
112
Tumor
0.0
132
Normal
0.0
816
Normal
0.0
262
Normal
0.0
1032
Normal
0.0
462
Normal
0.0
456
Normal
0.0
864
Normal
0.0
491
Tumor
0.0
756
Normal
0.0
977
Tumor
0.0
261
Tumor
0.0
477
Tumor
0.0
141
Tumor
0.0
114
Normal
0.0
912
Normal
0.0
666
Normal
0.0
416
Normal
0.0
358
Normal
0.0
376
Normal
0.0
618
Normal
0.0
716
Normal
0.0
913
Tumor
0.0
394
Normal
0.0
648
Normal
0.0
914
Normal
0.0
924
Normal
0.0
881
Tumor
0.0
328
Normal
0.0
196
Normal
0.0
297
Tumor
0.0
571
Tumor
0.0
488
Normal
0.0
873
Tumor
0.0
483
Tumor
0.0
432
Normal
0.0
137
Tumor
0.0
866
Normal
0.0
471
Tumor
0.0
354
Normal
0.0
616
Normal
0.0
128
Normal
0.0
564
Normal
0.0
956
Normal
0.0
387
Tumor
-0.1
814
Normal
-0.1
722
Normal
-0.1
824
Normal
-0.1
628
Normal
-0.1
518
Normal
-0.1
213
Tumor
-0.1
662
Normal
-0.1
443
Tumor
-0.1
445
Tumor
-0.1
385
Tumor
-0.1
664
Normal
-0.1
272
Normal
-0.1
124
Normal
-0.1
327
Tumor
-0.1
342
Normal
-0.1
185
Tumor
-0.1
883
Tumor
-0.1
423
Tumor
-0.1
126
Normal
-0.1
862
Normal
-0.1
218
Normal
-0.1
268
Normal
-0.1
642
Normal
-0.1
127
Tumor
-0.1
915
Tumor
-0.1
365
Tumor
-0.1
615
Tumor
-0.1
222
Normal
-0.1
641
Tumor
-0.1
515
Tumor
-0.1
744
Normal
-0.1
214
Normal
-0.1
111
Normal
-0.1
663
Tumor
-0.1
461
Tumor
-0.1
426
Normal
-0.1
952
Normal
-0.1
636
Normal
-0.1
444
Normal
-0.1
352
Normal
-0.1
563
Tumor
-0.1
863
Tumor
-0.1
446
Normal
-0.1
921
Tumor
-0.1
146
Normal
-0.2
685
Tumor
-0.2
231
Tumor
-0.2
714
Normal
-0.2
433
Tumor
-0.2
311
Tumor
-0.2
384
Normal
-0.2
786
Normal
-0.2
465
Tumor
-0.2
1031
Tumor
-0.2
867
Tumor
-0.2
741
Tumor
-0.2
975
Tumor
-0.2
815
Tumor
-0.2
422
Normal
-0.3
513
Tumor
-0.3
695
Tumor
-0.3
661
Tumor
-0.3
428
Normal
-0.3
414
Normal
-0.3
424
Normal
-0.3
911
Tumor
-0.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
