HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.6 nTPM
HPA Brain:21.1 nTPM
GTEx:27.6 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Pig:36.0 nTPM
Mouse:92.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014791
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 21.1
Sample id Sample description nTPM
Hippocampus
nTPM: 19.5
1898 Male, age 80, left hemisphere 26.1
1855 Male, age 76, left hemisphere 24.2
2148 Female, age 91, left hemisphere 17.9
2621 Female, age 67, right hemisphere 17.7
2529 Female, age 94, left hemisphere 15.9
1911 Female, age 85, right hemisphere 15.5
Dentate gyrus
nTPM: 18.4
2530 Female, age 94, left hemisphere 20.8
2010 Male, age 76, both hemispheres 20.7
1927 Female, age 91, both hemispheres 19.4
2531 Female, age 67, both hemispheres 18.0
2246 Female, age 85, both hemispheres 16.0
2528 Male, age 74, both hemispheres 15.3
Entorhinal gyrus
nTPM: 18.7
1787 Male, age 76, left hemisphere 22.8
2613 Female, age 94, left hemisphere 19.4
2764 Male, age 80, right hemisphere 19.4
1938 Female, age 85, left hemisphere 18.6
2117 Female, age 91, right hemisphere 17.9
2686 Male, age 75, right hemisphere 14.2
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 27.3
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 18.6
2082 Female, age 91, right hemisphere 16.7
2527 Male, age 74, both hemispheres 15.5
Hippocampus, CA2
nTPM: 21.1
1963 Male, age 80, left hemisphere 29.0
1892 Male, age 76, both hemispheres 25.4
2249 Male, age 74, both hemispheres 19.3
2113 Female, age 91, right hemisphere 19.1
1940 Female, age 85, left hemisphere 18.2
2437 Female, age 94, left hemisphere 15.6
Hippocampus, CA3
nTPM: 20.8
2436 Male, age 74, both hemispheres 26.4
2137 Male, age 80, left hemisphere 25.1
1867 Male, age 76, both hemispheres 21.9
2620 Female, age 94, left hemisphere 18.2
2861 Female, age 67, both hemispheres 16.7
1891 Female, age 85, both hemispheres 16.2
Parahippocampal cortex
nTPM: 17.4
1933 Female, age 85, both hemispheres 20.8
1850 Male, age 80, both hemispheres 20.1
1990 Female, age 91, right hemisphere 18.1
2250 Female, age 67, right hemisphere 18.1
2018 Male, age 76, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.6
2245 Female, age 91, both hemispheres 16.7
2692 Male, age 74, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.6
2622 Female, age 67, right hemisphere 13.1
Perirhinal gyrus
nTPM: 19.7
1847 Female, age 91, left hemisphere 25.0
1841 Female, age 85, right hemisphere 21.1
1794 Male, age 80, right hemisphere 19.6
2848 Male, age 76, right hemisphere 16.7
2521 Female, age 94, right hemisphere 16.1
Subiculum
nTPM: 16.5
1977 Female, age 85, both hemispheres 21.9
2729 Female, age 91, right hemisphere 17.6
1901 Male, age 80, both hemispheres 17.1
2042 Male, age 76, both hemispheres 14.5
2438 Female, age 94, left hemisphere 14.2
2619 Male, age 74, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.6
Samples: 197

Max nTPM: 46.0
Min nTPM: 15.4
Std nTPM: 4.9
Median nTPM: 27.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 39.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 38.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 36.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 35.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 35.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 35.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 35.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.0
Pig sample Sample description nTPM
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 43.0
Min nTPM: 27.0
Sample A Female 43.0
Sample B Female 29.4
Sample C Male 31.1
Sample D Male 27.0
Dorsal hippocampus
nTPM: 34.2
Samples: 4

Max nTPM: 43.2
Min nTPM: 25.8
Sample A Female 43.2
Sample B Female 35.9
Sample C Male 32.0
Sample D Male 25.8
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 36.2
Min nTPM: 25.6
Sample A Female 36.2
Sample B Female 29.3
Sample C Male 35.8
Sample D Male 25.6
Ventral hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 44.7
Min nTPM: 25.6
Sample A Female 35.8
Sample B Female 25.6
Sample C Male 44.7
Sample D Male 37.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 92.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.1
Samples: 4

Max nTPM: 88.2
Min nTPM: 76.1
Sample A Male 76.1
Sample B Male 80.0
Sample C Female 84.0
Sample D Female 88.2
Hippocampal formation
nTPM: 92.2
Samples: 4

Max nTPM: 99.1
Min nTPM: 85.8
Sample A Male 89.4
Sample B Male 94.6
Sample C Female 99.1
Sample D Female 85.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
1675 Antisense, RP_040604_01_C10, Mouse strain C57BL/6J (56 days, male) 1.0
1676 Antisense, RP_040604_01_C10, Mouse strain C57BL/6J (56 days, male) 0.4

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