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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
25.0
nTPM
HPA Brain:
81.2
nTPM
GTEx:
25.0
nTPM
FANTOM5:
124.5
Scaled Tags Per Million
Pig:
57.5
nTPM
Mouse:
77.9
nTPM
Allen mouse:
8.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
81.2
Sample id
Sample description
nTPM
Amygdala nTPM: 59.6
2695
Female, age 67, right hemisphere
65.6
2814
Male, age 76, right hemisphere
64.5
2517
Female, age 94, left hemisphere
59.0
2514
Male, age 75, right hemisphere
58.0
1987
Female, age 91, left hemisphere
51.0
Basal amygdala nTPM: 76.7
2243
Female, age 91, right hemisphere
92.7
2685
Female, age 94, left hemisphere
81.4
1955
Male, age 76, both hemispheres
78.0
2827
Female, age 67, right hemisphere
76.6
2110
Male, age 80, left hemisphere
66.4
2609
Male, age 75, right hemisphere
64.8
Central amygdala nTPM: 69.4
2239
Male, age 80, left hemisphere
87.9
2701
Female, age 91, right hemisphere
77.7
2826
Female, age 94, left hemisphere
70.2
1905
Male, age 76, both hemispheres
58.5
2515
Male, age 75, right hemisphere
52.5
Corticomedial amygdala nTPM: 81.2
2240
Male, age 76, both hemispheres
105.7
2535
Female, age 67, right hemisphere
100.8
2429
Female, age 94, left hemisphere
81.1
2242
Female, age 91, right hemisphere
75.1
2829
Male, age 80, left hemisphere
69.2
2428
Male, age 75, right hemisphere
55.1
Lateral amygdala nTPM: 69.2
2534
Female, age 94, left hemisphere
79.8
2256
Male, age 80, left hemisphere
76.8
1883
Male, age 76, both hemispheres
71.1
2255
Female, age 91, right hemisphere
70.4
2516
Male, age 75, right hemisphere
59.0
2830
Female, age 67, right hemisphere
58.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 25.0
Samples: 152
Max nTPM: 70.4
Min nTPM: 7.3
Std nTPM: 12.3
Median nTPM: 22.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
70.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
65.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
58.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
56.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
55.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
55.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
54.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
46.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
44.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
43.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
41.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
41.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
40.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
40.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
40.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
40.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
39.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
39.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
39.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
38.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
36.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
35.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
34.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
34.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
33.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
33.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
33.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
33.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
33.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
32.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
32.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
31.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
31.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
30.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
30.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
30.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
30.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
30.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
30.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
29.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
29.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
28.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
28.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
28.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
28.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
28.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
28.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
27.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
27.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
27.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
27.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
26.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
26.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
26.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
25.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
25.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
25.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
25.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
25.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
25.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
23.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
23.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
23.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
23.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
23.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
23.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
22.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
22.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
22.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
21.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
21.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
21.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
21.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
21.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
20.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
20.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
20.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
20.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
19.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
19.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
19.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
19.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
18.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
18.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
18.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
18.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
18.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
17.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
17.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
17.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
17.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
17.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
17.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
17.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
17.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
16.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
16.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
16.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
15.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
15.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
15.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
15.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
15.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
15.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
14.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
14.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
14.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
14.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
14.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
14.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
14.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
13.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
13.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
13.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
13.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
13.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
12.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
12.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
12.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
12.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
12.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
12.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
11.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
11.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
11.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
11.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
10.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
10.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
10.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
10.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
9.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
9.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
8.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
8.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 77.9
Samples: 4
Max nTPM: 91.9
Min nTPM: 68.6
Sample A
Male
68.6
Sample B
Male
78.4
Sample C
Female
91.9
Sample D
Female
72.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.