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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCUN1D1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
29.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
23.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
22.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
21.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
18.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
17.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
16.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
16.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
14.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
13.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
13.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
12.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
12.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
12.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
12.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
12.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
11.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
11.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
10.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
9.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
9.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
9.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
9.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
8.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
6.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
5.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
4.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCUN1D1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.9
Number of samples
231
Samples
Sample
Description
TPM
DO45137
0 years, male, NA, stage:1, alive, 1320 days
21.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
17.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
15.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
14.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
13.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
12.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
12.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
11.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
11.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
10.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
9.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
8.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
8.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
7.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
7.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
4.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
3.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
3.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
3.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
777
Tumor
1.1
863
Tumor
0.9
921
Tumor
0.8
523
Tumor
0.6
743
Tumor
0.6
727
Tumor
0.6
465
Tumor
0.5
141
Tumor
0.5
327
Tumor
0.5
746
Normal
0.5
737
Tumor
0.5
741
Tumor
0.4
137
Tumor
0.4
515
Tumor
0.4
647
Tumor
0.4
425
Tumor
0.4
111
Normal
0.4
952
Normal
0.3
663
Tumor
0.3
1027
Tumor
0.3
517
Tumor
0.3
391
Tumor
0.3
824
Normal
0.3
967
Tumor
0.3
436
Normal
0.3
527
Tumor
0.3
461
Tumor
0.3
1021
Tumor
0.3
445
Tumor
0.3
786
Normal
0.3
816
Normal
0.3
818
Normal
0.3
257
Tumor
0.3
956
Normal
0.3
128
Normal
0.3
136
Normal
0.2
955
Tumor
0.2
132
Normal
0.2
123
Tumor
0.2
738
Normal
0.2
862
Normal
0.2
186
Normal
0.2
196
Normal
0.2
877
Tumor
0.2
146
Normal
0.2
162
Normal
0.2
298
Normal
0.2
172
Normal
0.2
466
Normal
0.2
722
Normal
0.2
195
Tumor
0.2
147
Tumor
0.2
365
Tumor
0.2
742
Normal
0.2
456
Normal
0.2
114
Normal
0.2
778
Normal
0.2
131
Tumor
0.2
221
Tumor
0.2
698
Normal
0.2
618
Normal
0.2
222
Normal
0.2
648
Normal
0.2
518
Normal
0.2
125
Tumor
0.2
362
Normal
0.2
477
Tumor
0.2
148
Normal
0.2
462
Normal
0.2
728
Normal
0.2
126
Normal
0.2
416
Normal
0.1
938
Normal
0.1
138
Normal
0.1
864
Normal
0.1
884
Normal
0.1
874
Normal
0.1
423
Tumor
0.1
866
Normal
0.1
414
Normal
0.1
188
Normal
0.1
878
Normal
0.1
785
Tumor
0.1
721
Tumor
0.1
366
Normal
0.1
393
Tumor
0.1
422
Normal
0.1
1046
Normal
0.1
161
Tumor
0.1
745
Tumor
0.1
858
Normal
0.1
714
Normal
0.1
628
Normal
0.1
271
Tumor
0.1
868
Normal
0.1
361
Tumor
0.1
464
Normal
0.1
448
Normal
0.1
756
Normal
0.1
376
Normal
0.1
924
Normal
0.1
1022
Normal
0.1
723
Tumor
0.1
813
Tumor
0.1
867
Tumor
0.1
431
Tumor
0.1
428
Normal
0.1
424
Normal
0.1
616
Normal
0.1
484
Normal
0.1
218
Normal
0.1
472
Normal
0.1
912
Normal
0.1
744
Normal
0.1
914
Normal
0.1
966
Normal
0.1
1043
Tumor
0.1
223
Tumor
0.1
342
Normal
0.1
474
Normal
0.1
664
Normal
0.1
1026
Normal
0.1
411
Tumor
0.1
432
Normal
0.1
463
Tumor
0.1
258
Normal
0.1
852
Normal
0.1
212
Normal
0.1
913
Tumor
0.1
662
Normal
0.1
851
Tumor
0.1
525
Tumor
0.1
272
Normal
0.1
554
Normal
0.1
386
Normal
0.1
528
Normal
0.1
113
Tumor
0.1
695
Tumor
0.1
713
Tumor
0.1
228
Normal
0.1
452
Normal
0.1
1025
Tumor
0.1
232
Normal
0.1
983
Tumor
0.1
142
Normal
0.1
285
Tumor
0.1
817
Tumor
0.1
615
Tumor
0.0
642
Normal
0.0
915
Tumor
0.0
546
Normal
0.0
192
Normal
0.0
882
Normal
0.0
1013
Tumor
0.0
964
Normal
0.0
564
Normal
0.0
392
Normal
0.0
413
Tumor
0.0
286
Normal
0.0
916
Normal
0.0
356
Normal
0.0
332
Normal
0.0
341
Tumor
0.0
262
Normal
0.0
981
Tumor
0.0
473
Tumor
0.0
412
Normal
0.0
328
Normal
0.0
214
Normal
0.0
283
Tumor
0.0
468
Normal
0.0
957
Tumor
0.0
617
Tumor
0.0
426
Normal
0.0
686
Normal
0.0
911
Tumor
0.0
434
Normal
0.0
1031
Tumor
0.0
487
Tumor
0.0
968
Normal
0.0
446
Normal
0.0
696
Normal
0.0
516
Normal
0.0
357
Tumor
0.0
982
Normal
0.0
358
Normal
0.0
965
Tumor
0.0
953
Tumor
0.0
224
Normal
0.0
545
Tumor
0.0
567
Tumor
0.0
537
Tumor
0.0
977
Tumor
0.0
481
Tumor
0.0
944
Normal
0.0
1028
Normal
0.0
277
Tumor
0.0
627
Tumor
0.0
568
Normal
0.0
716
Normal
0.0
1016
Normal
0.0
572
Normal
0.0
497
Tumor
0.0
312
Normal
0.0
394
Normal
0.0
364
Normal
0.0
513
Tumor
0.0
433
Tumor
0.0
636
Normal
0.0
124
Normal
0.0
666
Normal
0.0
284
Normal
0.0
278
Normal
0.0
865
Tumor
0.0
534
Normal
0.0
526
Normal
0.0
447
Tumor
0.0
297
Tumor
0.0
331
Tumor
0.0
444
Normal
-0.1
533
Tumor
-0.1
112
Tumor
-0.1
492
Normal
-0.1
488
Normal
-0.1
922
Normal
-0.1
563
Tumor
-0.1
396
Normal
-0.1
918
Normal
-0.1
213
Tumor
-0.1
814
Normal
-0.1
482
Normal
-0.1
926
Normal
-0.1
313
Tumor
-0.1
553
Tumor
-0.1
1014
Normal
-0.1
724
Normal
-0.1
873
Tumor
-0.1
755
Tumor
-0.1
368
Normal
-0.1
455
Tumor
-0.1
353
Tumor
-0.1
558
Normal
-0.1
343
Tumor
-0.1
421
Tumor
-0.1
314
Normal
-0.1
388
Normal
-0.1
951
Tumor
-0.1
958
Normal
-0.1
171
Tumor
-0.1
535
Tumor
-0.1
483
Tumor
-0.1
493
Tumor
-0.1
127
Tumor
-0.1
1045
Tumor
-0.1
367
Tumor
-0.1
937
Tumor
-0.1
135
Tumor
-0.1
815
Tumor
-0.1
443
Tumor
-0.1
494
Normal
-0.1
344
Normal
-0.1
1044
Normal
-0.1
187
Tumor
-0.1
861
Tumor
-0.1
574
Normal
-0.1
354
Normal
-0.1
672
Normal
-0.1
697
Tumor
-0.1
217
Tumor
-0.1
715
Tumor
-0.1
976
Normal
-0.1
351
Tumor
-0.1
467
Tumor
-0.1
145
Tumor
-0.1
883
Tumor
-0.1
943
Tumor
-0.2
1042
Normal
-0.2
375
Tumor
-0.2
975
Tumor
-0.2
984
Normal
-0.2
954
Normal
-0.2
1041
Tumor
-0.2
923
Tumor
-0.2
268
Normal
-0.2
352
Normal
-0.2
857
Tumor
-0.2
435
Tumor
-0.2
384
Normal
-0.2
261
Tumor
-0.2
571
Tumor
-0.2
311
Tumor
-0.2
211
Tumor
-0.2
1032
Normal
-0.2
498
Normal
-0.2
536
Normal
-0.2
415
Tumor
-0.2
383
Tumor
-0.2
514
Normal
-0.2
185
Tumor
-0.3
385
Tumor
-0.3
538
Normal
-0.3
963
Tumor
-0.3
917
Tumor
-0.3
355
Tumor
-0.3
491
Tumor
-0.3
395
Tumor
-0.3
191
Tumor
-0.3
387
Tumor
-0.3
881
Tumor
-0.3
427
Tumor
-0.3
471
Tumor
-0.3
665
Tumor
-0.3
978
Normal
-0.3
267
Tumor
-0.3
478
Normal
-0.3
451
Tumor
-0.3
661
Tumor
-0.4
231
Tumor
-0.4
524
Normal
-0.4
573
Tumor
-0.4
557
Tumor
-0.4
671
Tumor
-0.4
363
Tumor
-0.4
823
Tumor
-0.4
641
Tumor
-0.5
227
Tumor
-0.5
1015
Tumor
-0.6
685
Tumor
-0.6
925
Tumor
-0.7
635
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
