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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
121.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
85.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
61.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
55.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
53.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
45.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
41.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
40.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
35.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
29.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
14.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
203.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
125.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
117.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
98.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
93.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
75.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
74.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
72.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
70.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
66.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
63.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
59.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
57.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
54.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
53.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
52.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
51.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
49.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
46.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
44.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
43.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
42.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
42.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
40.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
40.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
40.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
35.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
30.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
30.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
29.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
25.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
24.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
24.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
23.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
15.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
12.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
11.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
9.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
8.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
8.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
8.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
8.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
7.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
6.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
6.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
6.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
6.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
6.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
6.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
6.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
6.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
5.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
5.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
5.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
5.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
5.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
5.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
5.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
5.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
5.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
5.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
5.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
5.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
5.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
5.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
5.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
4.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
4.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
4.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
4.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
4.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
4.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
4.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
4.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
4.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
4.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
4.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
4.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
4.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
4.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
4.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
4.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
4.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
4.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
3.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
3.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
3.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
3.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
3.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
3.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
3.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
3.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
3.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
3.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
3.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
3.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
3.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
3.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
3.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
3.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
3.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
3.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
3.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
3.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
3.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
3.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
3.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
3.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
3.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
3.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
3.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
3.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
2.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
2.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
2.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
2.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
2.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
2.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
2.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
2.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
2.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
2.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
2.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
2.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
2.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
2.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
2.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
2.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
2.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
2.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
2.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
2.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
2.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
2.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
2.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
2.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
2.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
2.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
2.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
2.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
2.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
2.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
2.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
1.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
1.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
1.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
1.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
1.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
1.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
1.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
0.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
0.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
0.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
0.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
64.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
49.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
48.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
44.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
43.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
40.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
36.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
9.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
6.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
6.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
5.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
5.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
5.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
5.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
4.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
4.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
4.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
4.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
3.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
3.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
3.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
3.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
3.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
3.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
3.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
3.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
3.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
2.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
2.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
2.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
2.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
2.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
2.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
1.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
1.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
0.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
USP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
182.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
137.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
112.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
106.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
101.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
100.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
99.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
93.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
82.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
70.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
70.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
69.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
65.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
64.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
64.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
59.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
57.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
53.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
51.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
50.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
48.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
47.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
44.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
41.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
41.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
40.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
40.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
40.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
39.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
39.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
38.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
38.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
37.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
35.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
35.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
33.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
31.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
30.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
27.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
23.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
22.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
22.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
21.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
19.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
19.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
18.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
18.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
16.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
13.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
7.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
7.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
6.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
5.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
5.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
5.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
4.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
4.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
4.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
3.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
3.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
3.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
2.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
2.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
1.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077140001
Normal
1.4
CPT0092800003
Normal
1.3
CPT0000890001
Normal
1.3
CPT0065450001
Normal
1.3
CPT0001350001
Normal
1.2
CPT0076350001
Normal
1.2
CPT0088920001
Normal
1.2
CPT0087050003
Normal
1.2
CPT0012090003
Normal
1.1
CPT0026420001
Normal
1.1
CPT0012570003
Normal
1.1
CPT0007470001
Normal
1.1
CPT0025610001
Normal
1.1
CPT0006730001
Normal
1.0
CPT0023360001
Normal
1.0
CPT0079430001
Normal
1.0
CPT0066430001
Normal
1.0
CPT0088780001
Normal
1.0
CPT0082010001
Normal
1.0
CPT0065820001
Normal
1.0
CPT0020020001
Normal
0.9
CPT0012290003
Normal
0.9
CPT0081620001
Normal
0.9
CPT0007870001
Normal
0.9
CPT0020130001
Normal
0.9
CPT0077500001
Normal
0.9
CPT0086970003
Normal
0.9
CPT0023710001
Normal
0.9
CPT0009080003
Normal
0.8
CPT0006950001
Normal
0.8
CPT0092740003
Normal
0.8
CPT0025060001
Normal
0.8
CPT0088500001
Normal
0.8
CPT0086890003
Normal
0.8
CPT0078840001
Normal
0.8
CPT0010170001
Normal
0.8
CPT0000790001
Normal
0.7
CPT0089040001
Normal
0.7
CPT0078530001
Normal
0.7
CPT0079000001
Normal
0.7
CPT0013790003
Normal
0.7
CPT0017450001
Normal
0.7
CPT0066520001
Normal
0.7
CPT0078670001
Normal
0.7
CPT0064400001
Normal
0.6
CPT0069010001
Normal
0.6
CPT0012770003
Normal
0.6
CPT0075570001
Normal
0.6
CPT0092310003
Normal
0.6
CPT0089480003
Normal
0.6
CPT0088710001
Normal
0.6
CPT0019160001
Normal
0.6
CPT0014130001
Normal
0.6
CPT0086370003
Normal
0.6
CPT0001190001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0014470001
Normal
0.5
CPT0012920003
Normal
0.5
CPT0018250001
Normal
0.5
CPT0086830003
Normal
0.5
CPT0088570001
Normal
0.5
CPT0078940001
Normal
0.5
CPT0002370001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0006530001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0088640003
Normal
0.3
CPT0001550001
Normal
0.3
CPT0009020003
Normal
0.3
CPT0000660001
Normal
0.3
CPT0025920001
Normal
0.2
CPT0010120001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0001510001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0001230001
Normal
-0.2
CPT0078510003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0077310003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0023690003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0092790003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0001270001
Normal
-0.6
CPT0065810003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0088760003
Tumor
-0.7
CPT0079510001
Normal
-0.7
CPT0089460004
Tumor
-0.7
CPT0079300001
Normal
-0.7
CPT0025580004
Tumor
-0.7
CPT0015910003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0006440003
Tumor
-0.8
CPT0078930003
Tumor
-0.8
CPT0075560003
Tumor
-0.9
CPT0092190003
Normal
-0.9
CPT0011240003
Tumor
-0.9
CPT0021240003
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0012640003
Normal
-0.9
CPT0092160003
Tumor
-0.9
CPT0087040003
Tumor
-1.0
CPT0076330003
Tumor
-1.0
CPT0009000003
Tumor
-1.0
CPT0001220008
Tumor
-1.0
CPT0025050003
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0012550003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
CPT0002350011
Tumor
-1.1
CPT0009060003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0077320001
Normal
-1.1
CPT0081600003
Tumor
-1.1
CPT0081990003
Tumor
-1.1
CPT0069000003
Tumor
-1.2
CPT0088690003
Tumor
-1.2
CPT0020120003
Tumor
-1.2
CPT0089020003
Tumor
-1.2
CPT0088970003
Tumor
-1.2
CPT0066480003
Tumor
-1.2
CPT0084590001
Normal
-1.2
CPT0077490003
Tumor
-1.2
CPT0010110003
Tumor
-1.3
CPT0079480003
Tumor
-1.3
CPT0086950003
Tumor
-1.3
CPT0007320003
Tumor
-1.3
CPT0024670003
Tumor
-1.3
CPT0088480003
Tumor
-1.3
CPT0000640003
Tumor
-1.4
CPT0078660003
Tumor
-1.4
CPT0065870003
Tumor
-1.4
CPT0012370003
Tumor
-1.4
CPT0078830003
Tumor
-1.4
CPT0000780007
Tumor
-1.4
CPT0006630003
Tumor
-1.4
CPT0084560003
Tumor
-1.4
CPT0026410003
Tumor
-1.4
CPT0019130003
Tumor
-1.4
CPT0069160003
Tumor
-1.5
CPT0023350003
Tumor
-1.6
CPT0086820003
Tumor
-1.6
CPT0071150004
Tumor
-1.6
CPT0012670003
Tumor
-1.6
CPT0012280003
Tumor
-1.7
CPT0014370004
Tumor
-1.7
CPT0088630003
Tumor
-1.7
CPT0014450004
Tumor
-1.7
CPT0086870003
Tumor
-1.7
CPT0001340003
Tumor
-1.7
CPT0001260009
Tumor
-1.7
CPT0000870016
Tumor
-1.7
CPT0017850003
Tumor
-1.7
CPT0079410003
Tumor
-1.8
CPT0075130003
Tumor
-1.8
CPT0092730003
Tumor
-1.8
CPT0088900003
Tumor
-1.9
CPT0065430003
Tumor
-1.9
CPT0025880003
Tumor
-1.9
CPT0012180003
Tumor
-2.0
CPT0001180009
Tumor
-2.0
CPT0012080003
Tumor
-2.0
CPT0001540009
Tumor
-2.1
CPT0079270003
Tumor
-2.1
CPT0077110003
Tumor
-2.2
CPT0078990003
Tumor
-2.6
CPT0088550004
Tumor
-2.7
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
