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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CUL3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
61.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
56.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
55.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
54.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
51.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
50.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
50.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
48.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
47.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
45.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
43.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
43.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
43.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
41.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
41.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
41.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
39.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
39.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
38.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
38.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
38.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
37.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
37.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
37.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
37.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
36.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
36.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
35.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
35.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
35.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
35.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
35.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
34.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
34.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
34.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
34.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
34.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
32.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
31.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
31.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
31.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
29.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
29.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
28.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
28.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
28.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
28.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
28.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
28.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
28.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
27.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
27.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
27.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
27.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
27.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
27.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
27.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
27.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
27.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
26.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
26.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
26.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
26.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
26.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
26.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
26.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
26.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
25.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
25.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
25.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
25.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
25.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
25.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
25.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
25.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
25.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
25.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
25.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
25.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
25.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
24.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
24.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
24.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
24.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
24.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
24.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
24.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
24.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
24.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
24.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
23.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
23.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
23.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
23.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
22.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
22.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
22.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
22.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
22.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
22.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
22.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
22.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
22.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
22.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
22.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
21.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
21.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
21.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
21.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
21.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
21.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
21.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
21.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
21.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
21.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
21.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
21.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
20.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
20.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
20.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
20.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
20.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
20.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
20.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
20.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
20.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
20.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
20.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
20.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
20.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
19.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
19.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
19.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
19.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
19.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
19.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
19.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
19.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
19.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
19.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
19.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
19.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
19.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
19.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
18.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
18.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
18.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
18.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
18.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
18.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
18.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
18.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
17.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
17.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
17.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
17.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
17.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
17.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
16.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
16.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
16.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
16.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
15.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
15.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
15.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
14.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
14.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
14.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
14.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
13.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
13.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
12.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
12.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
12.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
11.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
11.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
10.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CUL3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.9
Number of samples
231
Samples
Sample
Description
TPM
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
12.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
11.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
11.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
10.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
10.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
9.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
9.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
9.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
6.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
6.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
3.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
313
Tumor
0.6
517
Tumor
0.5
743
Tumor
0.5
925
Tumor
0.5
1043
Tumor
0.4
131
Tumor
0.4
573
Tumor
0.4
527
Tumor
0.4
367
Tumor
0.3
487
Tumor
0.3
331
Tumor
0.3
955
Tumor
0.3
435
Tumor
0.3
815
Tumor
0.3
341
Tumor
0.3
342
Normal
0.3
1013
Tumor
0.3
553
Tumor
0.3
924
Normal
0.3
1046
Normal
0.3
448
Normal
0.3
1022
Normal
0.3
938
Normal
0.3
484
Normal
0.3
964
Normal
0.3
922
Normal
0.3
568
Normal
0.3
746
Normal
0.3
482
Normal
0.3
944
Normal
0.3
616
Normal
0.3
617
Tumor
0.3
535
Tumor
0.3
648
Normal
0.3
148
Normal
0.3
192
Normal
0.3
428
Normal
0.3
983
Tumor
0.3
447
Tumor
0.3
285
Tumor
0.3
128
Normal
0.3
422
Normal
0.2
1026
Normal
0.2
432
Normal
0.2
132
Normal
0.2
1032
Normal
0.2
818
Normal
0.2
497
Tumor
0.2
162
Normal
0.2
426
Normal
0.2
572
Normal
0.2
628
Normal
0.2
698
Normal
0.2
824
Normal
0.2
714
Normal
0.2
314
Normal
0.2
926
Normal
0.2
723
Tumor
0.2
558
Normal
0.2
918
Normal
0.2
618
Normal
0.2
352
Normal
0.2
666
Normal
0.2
952
Normal
0.2
414
Normal
0.2
664
Normal
0.2
965
Tumor
0.2
136
Normal
0.2
978
Normal
0.2
862
Normal
0.2
954
Normal
0.2
196
Normal
0.2
864
Normal
0.2
534
Normal
0.2
526
Normal
0.2
297
Tumor
0.2
478
Normal
0.2
672
Normal
0.2
354
Normal
0.2
298
Normal
0.2
1014
Normal
0.2
863
Tumor
0.2
738
Normal
0.2
376
Normal
0.2
966
Normal
0.2
472
Normal
0.2
222
Normal
0.2
636
Normal
0.2
356
Normal
0.2
146
Normal
0.2
383
Tumor
0.2
424
Normal
0.2
912
Normal
0.2
351
Tumor
0.2
385
Tumor
0.2
956
Normal
0.2
662
Normal
0.2
212
Normal
0.2
1044
Normal
0.2
463
Tumor
0.2
111
Normal
0.2
917
Tumor
0.2
358
Normal
0.2
554
Normal
0.2
878
Normal
0.2
642
Normal
0.2
958
Normal
0.2
695
Tumor
0.2
436
Normal
0.2
114
Normal
0.2
188
Normal
0.2
137
Tumor
0.2
536
Normal
0.2
363
Tumor
0.2
462
Normal
0.2
564
Normal
0.2
742
Normal
0.2
984
Normal
0.2
456
Normal
0.2
516
Normal
0.2
546
Normal
0.2
518
Normal
0.2
884
Normal
0.2
261
Tumor
0.2
186
Normal
0.2
446
Normal
0.2
258
Normal
0.2
268
Normal
0.2
786
Normal
0.2
332
Normal
0.2
366
Normal
0.2
866
Normal
0.2
312
Normal
0.2
172
Normal
0.2
126
Normal
0.2
661
Tumor
0.2
976
Normal
0.1
147
Tumor
0.1
471
Tumor
0.1
464
Normal
0.1
127
Tumor
0.1
434
Normal
0.1
916
Normal
0.1
877
Tumor
0.1
492
Normal
0.1
444
Normal
0.1
538
Normal
0.1
214
Normal
0.1
514
Normal
0.1
474
Normal
0.1
494
Normal
0.1
412
Normal
0.1
778
Normal
0.1
915
Tumor
0.1
882
Normal
0.1
858
Normal
0.1
228
Normal
0.1
744
Normal
0.1
968
Normal
0.1
1042
Normal
0.1
728
Normal
0.1
431
Tumor
0.1
278
Normal
0.1
232
Normal
0.1
284
Normal
0.1
477
Tumor
0.1
386
Normal
0.1
466
Normal
0.1
481
Tumor
0.1
686
Normal
0.1
224
Normal
0.1
286
Normal
0.1
868
Normal
0.1
852
Normal
0.1
982
Normal
0.1
362
Normal
0.1
191
Tumor
0.1
967
Tumor
0.1
756
Normal
0.1
498
Normal
0.1
696
Normal
0.1
567
Tumor
0.1
218
Normal
0.1
574
Normal
0.1
384
Normal
0.1
722
Normal
0.1
138
Normal
0.1
262
Normal
0.1
394
Normal
0.1
715
Tumor
0.1
716
Normal
0.1
528
Normal
0.1
1028
Normal
0.1
647
Tumor
0.1
468
Normal
0.1
344
Normal
0.1
488
Normal
0.1
416
Normal
0.1
443
Tumor
0.1
563
Tumor
0.1
671
Tumor
0.1
874
Normal
0.1
364
Normal
0.1
328
Normal
0.1
914
Normal
0.1
813
Tumor
0.1
425
Tumor
0.1
272
Normal
0.1
977
Tumor
0.1
217
Tumor
0.1
923
Tumor
0.1
415
Tumor
0.1
123
Tumor
0.1
195
Tumor
0.1
1016
Normal
0.1
635
Tumor
0.1
524
Normal
0.1
1027
Tumor
0.1
816
Normal
0.1
957
Tumor
0.1
145
Tumor
0.1
353
Tumor
0.1
396
Normal
0.1
452
Normal
0.0
388
Normal
0.0
641
Tumor
0.0
327
Tumor
0.0
745
Tumor
0.0
461
Tumor
0.0
142
Normal
0.0
113
Tumor
0.0
975
Tumor
0.0
911
Tumor
0.0
1031
Tumor
0.0
124
Normal
0.0
557
Tumor
0.0
665
Tumor
0.0
615
Tumor
0.0
171
Tumor
0.0
455
Tumor
0.0
423
Tumor
0.0
724
Normal
0.0
1021
Tumor
0.0
427
Tumor
0.0
943
Tumor
0.0
523
Tumor
0.0
141
Tumor
0.0
283
Tumor
0.0
361
Tumor
0.0
223
Tumor
0.0
963
Tumor
0.0
1045
Tumor
0.0
873
Tumor
0.0
814
Normal
0.0
721
Tumor
0.0
392
Normal
0.0
368
Normal
0.0
213
Tumor
0.0
473
Tumor
0.0
391
Tumor
0.0
737
Tumor
0.0
395
Tumor
0.0
211
Tumor
0.0
355
Tumor
-0.1
867
Tumor
-0.1
777
Tumor
-0.1
387
Tumor
-0.1
451
Tumor
-0.1
571
Tumor
-0.1
1025
Tumor
-0.1
421
Tumor
-0.1
857
Tumor
-0.1
951
Tumor
-0.1
515
Tumor
-0.1
865
Tumor
-0.1
491
Tumor
-0.1
493
Tumor
-0.1
953
Tumor
-0.1
277
Tumor
-0.1
913
Tumor
-0.1
627
Tumor
-0.1
663
Tumor
-0.1
445
Tumor
-0.1
545
Tumor
-0.1
365
Tumor
-0.1
537
Tumor
-0.1
125
Tumor
-0.1
881
Tumor
-0.1
311
Tumor
-0.1
921
Tumor
-0.1
271
Tumor
-0.1
112
Tumor
-0.1
257
Tumor
-0.1
861
Tumor
-0.1
413
Tumor
-0.1
411
Tumor
-0.2
343
Tumor
-0.2
1015
Tumor
-0.2
697
Tumor
-0.2
981
Tumor
-0.2
221
Tumor
-0.2
713
Tumor
-0.2
727
Tumor
-0.2
937
Tumor
-0.2
1041
Tumor
-0.2
823
Tumor
-0.2
433
Tumor
-0.2
741
Tumor
-0.2
465
Tumor
-0.2
525
Tumor
-0.2
187
Tumor
-0.2
185
Tumor
-0.2
851
Tumor
-0.2
231
Tumor
-0.2
375
Tumor
-0.3
533
Tumor
-0.3
357
Tumor
-0.3
161
Tumor
-0.3
785
Tumor
-0.3
267
Tumor
-0.3
227
Tumor
-0.3
393
Tumor
-0.3
883
Tumor
-0.3
817
Tumor
-0.3
135
Tumor
-0.4
513
Tumor
-0.4
467
Tumor
-0.4
685
Tumor
-0.4
755
Tumor
-0.4
483
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.