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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3YL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
67.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
60.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
56.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
52.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
42.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
41.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
40.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
38.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
36.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
30.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
29.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
29.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
25.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
24.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
24.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
14.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
7.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3YL1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
194.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
168.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
168.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
147.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
139.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
129.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
116.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
115.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
115.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
111.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
107.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
102.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
101.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
98.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
98.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
97.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
96.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
95.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
89.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
89.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
89.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
87.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
87.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
87.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
85.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
85.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
81.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
81.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
81.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
80.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
79.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
78.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
77.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
77.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
76.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
75.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
75.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
74.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
74.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
74.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
74.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
74.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
74.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
74.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
73.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
73.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
72.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
72.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
72.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
71.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
71.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
71.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
71.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
70.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
70.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
70.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
70.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
69.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
69.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
69.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
69.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
67.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
67.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
67.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
66.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
66.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
66.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
65.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
65.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
65.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
65.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
65.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
64.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
64.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
64.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
63.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
63.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
63.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
63.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
63.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
62.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
62.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
62.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
62.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
61.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
61.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
61.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
60.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
60.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
60.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
60.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
60.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
59.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
59.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
58.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
58.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
58.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
58.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
58.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
58.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
58.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
58.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
58.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
58.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
58.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
57.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
57.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
57.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
57.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
56.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
56.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
56.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
56.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
55.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
55.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
55.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
55.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
55.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
55.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
55.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
54.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
54.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
54.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
53.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
53.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
53.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
53.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
53.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
52.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
52.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
51.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
51.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
51.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
50.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
50.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
50.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
50.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
50.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
50.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
50.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
49.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
49.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
49.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
49.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
48.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
48.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
47.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
47.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
47.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
46.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
46.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
46.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
45.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
45.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
44.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
44.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
44.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
44.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
44.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
44.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
44.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
43.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
43.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
43.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
43.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
43.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
43.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
43.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
42.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
42.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
42.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
41.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
41.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
41.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
41.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
41.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
41.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
40.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
40.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
40.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
40.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
39.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
39.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
39.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
39.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
39.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
38.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
38.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
38.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
38.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
38.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
38.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
38.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
38.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
37.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
37.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
37.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
37.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
35.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
35.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
33.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
33.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
33.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
33.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
33.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
33.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
32.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
32.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
32.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
32.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
31.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
29.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
28.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
28.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
28.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
26.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
24.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
24.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
23.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
23.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
20.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
16.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
15.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
9.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
6.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3YL1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
198.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
127.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
127.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
118.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
116.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
105.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
97.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
97.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
97.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
95.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
93.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
92.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
91.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
90.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
88.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
84.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
82.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
82.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
81.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
78.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
77.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
76.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
72.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
67.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
67.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
66.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
63.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
62.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
62.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
61.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
61.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
59.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
59.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
57.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
57.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
56.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
56.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
56.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
55.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
55.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
54.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
51.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
50.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
47.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
47.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
35.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
33.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
4.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3YL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
199.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
116.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
89.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
74.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
71.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
69.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
66.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
63.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
61.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
58.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
53.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
53.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
49.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
47.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
45.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
45.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
42.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
41.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
40.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
38.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
38.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
38.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
36.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
35.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
35.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
34.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
33.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
32.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
32.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
30.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
29.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
28.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
27.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
26.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
26.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
24.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
21.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
20.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
20.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
19.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
19.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
18.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
18.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
17.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
15.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
14.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
9.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
6.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
4.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
3.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065450001
Normal
1.5
CPT0066430001
Normal
1.4
CPT0078840001
Normal
1.4
CPT0006950001
Normal
1.3
CPT0025060001
Normal
1.2
CPT0077140001
Normal
1.2
CPT0001350001
Normal
1.2
CPT0000790001
Normal
1.2
CPT0076350001
Normal
1.1
CPT0088710001
Normal
1.1
CPT0079430001
Normal
1.1
CPT0018250001
Normal
1.1
CPT0010170001
Normal
1.1
CPT0089040001
Normal
1.1
CPT0012770003
Normal
1.1
CPT0023360001
Normal
1.1
CPT0092800003
Normal
1.0
CPT0014130001
Normal
1.0
CPT0020130001
Normal
1.0
CPT0024680001
Normal
1.0
CPT0075570001
Normal
1.0
CPT0092310003
Normal
1.0
CPT0092740003
Normal
1.0
CPT0007470001
Normal
0.9
CPT0078670001
Normal
0.9
CPT0012570003
Normal
0.9
CPT0013790003
Normal
0.9
CPT0088920001
Normal
0.8
CPT0088570001
Normal
0.8
CPT0089480003
Normal
0.7
CPT0078940001
Normal
0.7
CPT0012290003
Normal
0.7
CPT0009080003
Normal
0.7
CPT0012920003
Normal
0.7
CPT0063640001
Normal
0.7
CPT0025920001
Normal
0.7
CPT0009020003
Normal
0.6
CPT0020020001
Normal
0.6
CPT0001190001
Normal
0.6
CPT0078530001
Normal
0.6
CPT0066520001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0087050003
Normal
0.5
CPT0077500001
Normal
0.5
CPT0086830003
Normal
0.5
CPT0079000001
Normal
0.5
CPT0012090003
Normal
0.5
CPT0006730001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0081620001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0065930003
Tumor
0.4
CPT0017450001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0086370003
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0014350001
Normal
0.1
CPT0000890001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0000660001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0063330001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0088690003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0069160003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0007320003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0014450004
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0000870016
Tumor
-0.6
CPT0000780007
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0079480003
Tumor
-0.7
CPT0092790003
Tumor
-0.7
CPT0001180009
Tumor
-0.7
CPT0019990003
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0078510003
Tumor
-0.8
CPT0002350011
Tumor
-0.8
CPT0089020003
Tumor
-0.8
CPT0012370003
Tumor
-0.8
CPT0025350003
Tumor
-0.8
CPT0063320003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0011240003
Tumor
-0.9
CPT0078660003
Tumor
-0.9
CPT0092160003
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0079300001
Normal
-0.9
CPT0076330003
Tumor
-0.9
CPT0086820003
Tumor
-0.9
CPT0065430003
Tumor
-0.9
CPT0075560003
Tumor
-0.9
CPT0066470004
Tumor
-0.9
CPT0025110003
Tumor
-0.9
CPT0092190003
Normal
-0.9
CPT0014370004
Tumor
-0.9
CPT0002270011
Tumor
-1.0
CPT0001500009
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0087040003
Tumor
-1.0
CPT0079270003
Tumor
-1.0
CPT0017410003
Tumor
-1.0
CPT0081990003
Tumor
-1.0
CPT0012670003
Tumor
-1.0
CPT0081880003
Tumor
-1.0
CPT0088500001
Normal
-1.0
CPT0017850003
Tumor
-1.1
CPT0025050003
Tumor
-1.1
CPT0015910003
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0012550003
Tumor
-1.1
CPT0081600003
Tumor
-1.1
CPT0065690003
Tumor
-1.2
CPT0086870003
Tumor
-1.2
CPT0023690003
Tumor
-1.2
CPT0086360003
Tumor
-1.2
CPT0021240003
Tumor
-1.2
CPT0077490003
Tumor
-1.2
CPT0006630003
Tumor
-1.2
CPT0014160003
Tumor
-1.2
CPT0020120003
Tumor
-1.2
CPT0088760003
Tumor
-1.3
CPT0000640003
Tumor
-1.3
CPT0071150004
Tumor
-1.3
CPT0009000003
Tumor
-1.3
CPT0025580004
Tumor
-1.3
CPT0001260009
Tumor
-1.4
CPT0026410003
Tumor
-1.4
CPT0025170003
Tumor
-1.4
CPT0077310003
Tumor
-1.4
CPT0092290003
Tumor
-1.4
CPT0088630003
Tumor
-1.5
CPT0006440003
Tumor
-1.5
CPT0088900003
Tumor
-1.5
CPT0092730003
Tumor
-1.5
CPT0075130003
Tumor
-1.5
CPT0086950003
Tumor
-1.5
CPT0079410003
Tumor
-1.5
CPT0063630003
Tumor
-1.6
CPT0025290003
Tumor
-1.6
CPT0009060003
Tumor
-1.6
CPT0089460004
Tumor
-1.7
CPT0012080003
Tumor
-1.7
CPT0088480003
Tumor
-1.8
CPT0011410003
Tumor
-1.9
CPT0088550004
Tumor
-2.0
CPT0001340003
Tumor
-2.1
CPT0023350003
Tumor
-2.2
CPT0012180003
Tumor
-2.4
CPT0078800003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0085670003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
