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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
159.4
nTPM
GTEx:
159.4
nTPM
FANTOM5:
431.8
Scaled Tags Per Million
Mouse:
0.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
159.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 159.4
Samples: 105
Max nTPM: 323.5
Min nTPM: 67.0
Std nTPM: 48.6
Median nTPM:
506_1
65 years, male
323.5
452_1
88 years, female
288.5
237_1
82 years, male
276.9
41_1
94 years, female
270.7
350_1
84 years, female
254.9
384_1
83 years, male
246.7
377_1
82 years, female
238.0
447_1
81 years, male
237.2
2_1
77 years, female
231.3
173_1
67 years, male
223.3
375_1
74 years, female
221.1
396_1
62 years, male
212.6
316_1
62 years, male
210.4
319_1
81 years, male
203.7
320_1
89 years, female
202.4
353_1
82 years, female
200.5
322_1
76 years, male
199.6
177_1
74 years, male
198.9
99_1
64 years, male
195.5
4_1
88 years, female
194.7
404_1
82 years, female
193.0
163_1
78 years, male
192.7
42_1
85 years, male
190.6
120_1
70 years, female
189.1
295_1
61 years, female
188.7
318_1
68 years, male
185.8
321_1
62 years, female
185.3
480_1
63 years, male
185.0
172_1
72 years, female
184.5
265_1
87 years, male
183.6
348_1
84 years, male
178.9
115_1
83 years, male
178.2
251_1
78 years, male
177.4
314_1
67 years, male
177.1
526_1
61 years, male
177.1
352_1
62 years, male
176.0
355_1
70 years, female
173.7
379_1
60 years, male
173.5
386_1
76 years, male
172.8
356_1
87 years, female
170.8
286_1
68 years, female
170.0
347_1
72 years, male
168.3
139_1
64 years, female
167.6
264_1
73 years, female
166.8
153_1
70 years, female
165.1
291_1
76 years, male
165.0
376_1
75 years, female
165.0
17_1
71 years, male
164.7
218_1
71 years, female
164.6
189_1
76 years, male
164.5
145_1
84 years, male
163.7
351_1
91 years, male
163.7
293_1
68 years, female
162.2
354_1
81 years, female
160.0
6_1
73 years, female
159.2
119_1
70 years, female
157.9
317_1
60 years, male
156.7
324_1
76 years, male
156.7
405_1
91 years, male
155.1
425_1
59 years, female
154.1
117_1
61 years, male
153.2
501_1
88 years, male
148.0
313_1
79 years, female
146.7
394_1
75 years, female
144.9
35_1
74 years, female
144.2
142_1
61 years, female
142.8
109_1
81 years, female
140.8
254_1
77 years, female
140.8
311_1
78 years, male
140.5
307_1
66 years, female
139.7
229_1
69 years, female
139.5
243_1
75 years, male
138.6
335_1
73 years, female
133.4
292_1
71 years, male
132.3
468_1
89 years, male
127.0
315_1
62 years, female
126.4
288_1
66 years, female
126.3
503_1
68 years, male
126.1
406_1
79 years, male
125.9
18_1
88 years, male
125.2
246_1
77 years, male
125.2
308_1
70 years, female
125.0
9_1
66 years, female
124.7
518_1
75 years, female
124.5
81_1
67 years, male
118.6
517_1
88 years, male
117.4
43_1
64 years, female
110.2
499_1
55 years, female
109.7
162_1
79 years, female
103.2
137_1
83 years, male
102.7
126_1
63 years, male
102.4
414_1
84 years, female
99.8
349_1
83 years, male
97.9
89_1
63 years, male
95.7
495_1
57 years, female
94.9
266_1
85 years, male
94.7
217_1
76 years, male
94.6
32_1
67 years, male
89.6
149_1
88 years, male
87.0
466_1
57 years, female
86.2
389_1
86 years, female
85.4
413_1
59 years, female
85.0
415_1
77 years, female
71.6
491_1
89 years, female
70.4
490_1
67 years, female
67.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
