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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP2K3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
62.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
58.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
48.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
44.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
40.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
31.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
29.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
27.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
23.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
20.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
16.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
14.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
10.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP2K3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
169.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
136.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
134.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
133.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
119.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
114.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
114.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
111.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
110.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
101.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
100.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
91.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
91.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
90.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
89.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
88.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
87.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
86.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
85.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
85.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
84.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
82.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
81.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
81.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
80.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
75.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
73.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
72.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
72.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
71.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
71.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
71.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
70.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
65.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
64.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
63.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
63.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
62.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
62.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
61.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
57.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
57.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
55.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
55.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
54.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
54.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
54.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
53.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
53.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
53.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
52.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
51.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
50.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
50.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
49.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
48.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
48.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
48.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
48.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
48.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
47.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
46.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
46.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
46.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
45.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
45.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
45.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
44.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
44.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
44.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
44.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
43.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
43.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
42.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
42.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
41.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
41.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
41.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
41.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
41.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
41.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
40.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
40.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
40.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
40.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
39.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
39.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
38.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
38.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
38.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
37.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
37.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
37.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
37.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
36.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
36.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
36.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
36.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
36.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
36.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
36.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
36.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
35.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
35.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
35.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
35.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
35.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
35.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
35.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
35.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
35.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
35.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
34.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
34.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
34.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
34.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
34.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
34.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
34.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
33.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
33.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
33.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
32.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
32.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
32.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
32.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
32.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
32.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
31.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
31.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
31.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
31.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
31.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
31.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
31.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
31.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
31.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
30.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
30.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
29.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
29.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
29.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
29.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
29.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
28.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
28.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
28.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
28.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
28.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
28.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
28.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
27.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
27.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
27.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
27.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
26.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
26.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
26.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
26.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
25.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
25.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
25.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
25.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
24.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
24.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
24.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
24.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
23.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
23.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
22.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
22.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
22.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
22.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
22.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
22.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
21.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
21.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
20.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
20.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
20.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
19.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
18.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
11.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP2K3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
95.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
90.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
84.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
61.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
60.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
59.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
59.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
54.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
45.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
44.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
43.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
42.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
41.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
39.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
39.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
38.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
38.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
37.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
37.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
37.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
37.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
35.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
35.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
35.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
33.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
31.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
30.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
30.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
30.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
29.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
26.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
25.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
20.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAP2K3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
118.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
103.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
97.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
97.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
93.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
92.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
91.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
85.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
85.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
84.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
83.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
80.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
78.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
78.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
74.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
72.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
71.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
71.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
70.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
65.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
63.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
63.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
63.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
62.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
62.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
58.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
57.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
56.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
55.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
55.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
55.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
54.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
54.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
54.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
54.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
53.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
53.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
53.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
52.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
52.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
52.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
51.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
51.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
51.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
51.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
50.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
50.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
49.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
49.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
49.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
48.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
48.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
47.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
47.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
47.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
47.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
45.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
45.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
45.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
45.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
45.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
44.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
43.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
43.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
43.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
43.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
42.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
42.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
42.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
41.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
41.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
41.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
41.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
40.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
40.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
39.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
38.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
38.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
38.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
38.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
37.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
37.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
37.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
37.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
36.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
36.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
36.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
36.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
34.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
34.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
34.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
34.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
33.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
33.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
32.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
32.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
32.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
32.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
31.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
31.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
31.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
31.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
30.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
30.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
29.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
28.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
28.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
28.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
28.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
27.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
27.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
27.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
26.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
25.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
24.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
24.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
24.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
24.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
23.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
23.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
23.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
20.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
20.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
16.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012280003
Tumor
0.5
CPT0071150004
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0081880003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0000790001
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0023350003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0017850003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0023690003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0078940001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0079510001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0089040001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0064370003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0015730003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0002270011
Tumor
-0.4
CPT0088970003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0001340003
Tumor
-0.6
CPT0078660003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
