HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:30.3 nTPM
HPA Brain:42.5 nTPM
GTEx:30.3 nTPM
FANTOM5:41.3 Scaled Tags Per Million
Pig:36.6 nTPM
Mouse:51.0 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043375Antibody HPA043389
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.1
2529 Female, age 94, left hemisphere 46.2
1855 Male, age 76, left hemisphere 44.7
2621 Female, age 67, right hemisphere 44.7
1898 Male, age 80, left hemisphere 40.4
2148 Female, age 91, left hemisphere 38.3
1911 Female, age 85, right hemisphere 32.4
Dentate gyrus
nTPM: 41.8
2530 Female, age 94, left hemisphere 48.7
2531 Female, age 67, both hemispheres 41.7
2246 Female, age 85, both hemispheres 41.4
2010 Male, age 76, both hemispheres 41.0
2528 Male, age 74, both hemispheres 40.3
1927 Female, age 91, both hemispheres 37.8
Entorhinal gyrus
nTPM: 39.6
1938 Female, age 85, left hemisphere 44.8
2764 Male, age 80, right hemisphere 42.9
1787 Male, age 76, left hemisphere 41.3
2117 Female, age 91, right hemisphere 39.2
2686 Male, age 75, right hemisphere 35.1
2613 Female, age 94, left hemisphere 34.6
Hippocampus, CA1
nTPM: 40.3
2749 Male, age 80, left hemisphere 52.0
1873 Female, age 85, both hemispheres 40.0
2527 Male, age 74, both hemispheres 39.4
2045 Male, age 76, both hemispheres 36.9
2082 Female, age 91, right hemisphere 33.2
Hippocampus, CA2
nTPM: 40.5
1963 Male, age 80, left hemisphere 47.4
1892 Male, age 76, both hemispheres 44.8
2437 Female, age 94, left hemisphere 44.4
2249 Male, age 74, both hemispheres 36.6
2113 Female, age 91, right hemisphere 36.1
1940 Female, age 85, left hemisphere 33.9
Hippocampus, CA3
nTPM: 42.5
2620 Female, age 94, left hemisphere 51.3
2861 Female, age 67, both hemispheres 46.2
2137 Male, age 80, left hemisphere 43.2
1867 Male, age 76, both hemispheres 41.0
2436 Male, age 74, both hemispheres 40.5
1891 Female, age 85, both hemispheres 32.7
Parahippocampal cortex
nTPM: 39.2
2245 Female, age 91, both hemispheres 48.3
2018 Male, age 76, both hemispheres 41.7
2532 Female, age 72, left hemisphere 40.3
1990 Female, age 91, right hemisphere 38.4
1933 Female, age 85, both hemispheres 38.2
2622 Female, age 67, right hemisphere 38.2
1850 Male, age 80, both hemispheres 37.1
2250 Female, age 67, right hemisphere 37.1
2692 Male, age 74, both hemispheres 36.4
2693 Female, age 94, both hemispheres 35.9
Perirhinal gyrus
nTPM: 39.8
1847 Female, age 91, left hemisphere 44.3
1794 Male, age 80, right hemisphere 43.7
1841 Female, age 85, right hemisphere 39.9
2848 Male, age 76, right hemisphere 36.6
2521 Female, age 94, right hemisphere 34.7
Subiculum
nTPM: 39.8
2438 Female, age 94, left hemisphere 44.7
2619 Male, age 74, both hemispheres 42.7
1977 Female, age 85, both hemispheres 40.0
2042 Male, age 76, both hemispheres 39.8
2729 Female, age 91, right hemisphere 35.8
1901 Male, age 80, both hemispheres 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.3
Samples: 197

Max nTPM: 44.5
Min nTPM: 17.1
Std nTPM: 4.4
Median nTPM: 30.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 38.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 38.5
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 38.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 37.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.3
FF:10153-102I9 76 years, female 47.3
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.6
Pig sample Sample description nTPM
Subiculum
nTPM: 34.0
Samples: 4

Max nTPM: 39.5
Min nTPM: 30.6
Sample A Female 39.5
Sample B Female 32.0
Sample C Male 34.0
Sample D Male 30.6
Dorsal hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 40.3
Min nTPM: 30.3
Sample A Female 40.3
Sample B Female 37.3
Sample C Male 33.2
Sample D Male 30.3
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 33.2
Min nTPM: 27.6
Sample A Female 33.2
Sample B Female 29.6
Sample C Male 29.8
Sample D Male 27.6
Ventral hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 43.2
Min nTPM: 30.3
Sample A Female 35.8
Sample B Female 30.3
Sample C Male 43.2
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 51.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 50.4
Min nTPM: 48.4
Sample A Male 48.4
Sample B Male 50.4
Sample C Female 48.6
Sample D Female 49.7
Hippocampal formation
nTPM: 51.0
Samples: 4

Max nTPM: 53.8
Min nTPM: 49.2
Sample A Male 50.1
Sample B Male 49.2
Sample C Female 53.8
Sample D Female 50.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71493044 Antisense, RP_050913_02_A09, Mouse strain C57BL/6J (56 days, male) 1.0

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