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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A9 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
51.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
48.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
47.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
46.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
46.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
43.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
40.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
39.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
39.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
39.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
39.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
37.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
37.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
37.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
36.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
35.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
35.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
34.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
34.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
34.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
34.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
34.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
33.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
33.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
33.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
32.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
32.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
32.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
31.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
31.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
30.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
30.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
30.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
29.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
29.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
29.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
29.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
28.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
28.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
28.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
28.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
28.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
28.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
28.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
28.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
27.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
27.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
27.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
27.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
27.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
27.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
26.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
26.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
25.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
25.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
25.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
25.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
24.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
24.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
24.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
24.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
24.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
24.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
24.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
24.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
24.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
24.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
24.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
24.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
24.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
24.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
23.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
23.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
23.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
23.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
23.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
23.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
23.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
23.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
23.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
23.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
23.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
23.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
23.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
23.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
23.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
22.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
22.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
22.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
22.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
22.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
22.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
22.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
22.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
22.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
21.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
21.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
21.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
21.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
21.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
21.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
21.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
21.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
21.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
21.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
21.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
21.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
21.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
21.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
21.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
21.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
20.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
20.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
20.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
20.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
20.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
20.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
20.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
20.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
20.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
20.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
20.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
20.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
20.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
20.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
20.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
19.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
19.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
19.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
19.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
19.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
19.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
19.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
19.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
19.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
19.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
18.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
18.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
18.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
18.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
18.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
18.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
18.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
18.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
18.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
18.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
18.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
18.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
17.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
17.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
17.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
17.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
17.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
17.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
17.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
17.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
17.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
17.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
16.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
16.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
16.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
16.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
16.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
16.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
16.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
16.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
16.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
16.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
15.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
15.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
15.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
15.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
15.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
15.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
15.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
14.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
14.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
14.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
13.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
13.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
13.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
13.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
12.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
12.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
11.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
11.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
8.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A9 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
231
Samples
Sample
Description
TPM
DO48701
0 years, male, NA, stage:2, alive, 780 days
43.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
40.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
38.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
34.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
32.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
31.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
29.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
29.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
28.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
27.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
27.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
27.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
26.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
26.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
26.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
25.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
25.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
24.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
24.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
24.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
24.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
24.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
23.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
23.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
22.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
22.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
22.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
22.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
21.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
21.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
21.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
20.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
20.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
20.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
20.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
20.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
20.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
20.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
19.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
19.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
19.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
19.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
19.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
18.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
18.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
18.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
17.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
17.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
17.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
17.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
16.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
16.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
16.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
16.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
16.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
15.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
15.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
15.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
15.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
15.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
14.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
14.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
14.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
14.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
14.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
14.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
13.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
13.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
12.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
12.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
12.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
11.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
11.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
11.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
11.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
10.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
10.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
9.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
7.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
2.5
615
Tumor
1.5
641
Tumor
1.4
278
Normal
1.2
627
Tumor
1.2
277
Tumor
1.1
128
Normal
1.0
111
Normal
0.9
456
Normal
0.8
452
Normal
0.8
125
Tumor
0.8
332
Normal
0.7
313
Tumor
0.7
436
Normal
0.7
813
Tumor
0.6
112
Tumor
0.6
114
Normal
0.6
298
Normal
0.6
451
Tumor
0.6
314
Normal
0.6
432
Normal
0.6
571
Tumor
0.6
386
Normal
0.6
124
Normal
0.5
394
Normal
0.5
818
Normal
0.5
392
Normal
0.5
464
Normal
0.5
257
Tumor
0.5
113
Tumor
0.5
297
Tumor
0.5
126
Normal
0.5
468
Normal
0.4
446
Normal
0.4
463
Tumor
0.4
858
Normal
0.4
642
Normal
0.4
568
Normal
0.4
271
Tumor
0.4
466
Normal
0.4
396
Normal
0.4
824
Normal
0.3
618
Normal
0.3
312
Normal
0.3
272
Normal
0.3
564
Normal
0.3
572
Normal
0.3
267
Tumor
0.3
554
Normal
0.3
574
Normal
0.3
231
Tumor
0.3
756
Normal
0.3
127
Tumor
0.3
435
Tumor
0.2
816
Normal
0.2
258
Normal
0.2
444
Normal
0.2
814
Normal
0.2
232
Normal
0.2
356
Normal
0.2
434
Normal
0.2
123
Tumor
0.2
445
Tumor
0.2
331
Tumor
0.2
311
Tumor
0.2
388
Normal
0.1
746
Normal
0.1
433
Tumor
0.1
416
Normal
0.1
636
Normal
0.1
491
Tumor
0.1
528
Normal
0.1
498
Normal
0.1
558
Normal
0.1
497
Tumor
0.0
557
Tumor
0.0
493
Tumor
0.0
328
Normal
0.0
534
Normal
0.0
488
Normal
0.0
262
Normal
0.0
852
Normal
0.0
546
Normal
0.0
492
Normal
0.0
364
Normal
-0.1
494
Normal
-0.1
563
Tumor
-0.1
484
Normal
-0.1
261
Tumor
-0.1
431
Tumor
-0.1
628
Normal
-0.1
268
Normal
-0.2
327
Tumor
-0.2
815
Tumor
-0.2
616
Normal
-0.2
786
Normal
-0.2
487
Tumor
-0.2
567
Tumor
-0.3
443
Tumor
-0.3
777
Tumor
-0.3
573
Tumor
-0.3
857
Tumor
-0.3
538
Normal
-0.3
527
Tumor
-0.3
391
Tumor
-0.3
483
Tumor
-0.4
745
Tumor
-0.4
465
Tumor
-0.4
545
Tumor
-0.4
393
Tumor
-0.4
467
Tumor
-0.5
553
Tumor
-0.5
823
Tumor
-0.5
412
Normal
-0.6
415
Tumor
-0.6
778
Normal
-0.6
785
Tumor
-0.6
533
Tumor
-0.6
851
Tumor
-0.6
537
Tumor
-0.7
755
Tumor
-0.7
363
Tumor
-0.8
455
Tumor
-0.8
395
Tumor
-0.8
411
Tumor
-0.8
355
Tumor
-0.9
387
Tumor
-0.9
617
Tumor
-1.0
817
Tumor
-1.0
385
Tumor
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
937
Tumor
N/A
938
Normal
N/A
141
Tumor
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
943
Tumor
N/A
944
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
978
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
423
Tumor
N/A
665
Tumor
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
211
Tumor
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
223
Tumor
N/A
344
Normal
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.