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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VEZT is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
13.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
10.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
6.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
6.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
6.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
5.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
5.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
5.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
5.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
4.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
4.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
4.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
4.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
4.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
3.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
3.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
3.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
3.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
3.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
3.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
3.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
3.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
3.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
3.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
2.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
2.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
2.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
2.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
2.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
2.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
2.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
2.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
2.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
2.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
2.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
2.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
2.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
2.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
2.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
2.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
1.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VEZT is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.4
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
48.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
30.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
30.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
25.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
23.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
22.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
21.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
20.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
19.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
16.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
15.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
15.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
15.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
14.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
13.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
11.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
10.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
5.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.3
865
Tumor
1.2
545
Tumor
1.1
745
Tumor
1.1
573
Tumor
1.0
311
Tumor
0.9
285
Tumor
0.9
1013
Tumor
0.8
523
Tumor
0.8
647
Tumor
0.8
473
Tumor
0.8
283
Tumor
0.7
535
Tumor
0.7
455
Tumor
0.7
463
Tumor
0.7
313
Tumor
0.7
857
Tumor
0.6
493
Tumor
0.6
727
Tumor
0.6
361
Tumor
0.6
411
Tumor
0.6
746
Normal
0.6
421
Tumor
0.6
943
Tumor
0.6
983
Tumor
0.6
327
Tumor
0.6
277
Tumor
0.5
447
Tumor
0.5
497
Tumor
0.5
671
Tumor
0.5
491
Tumor
0.5
617
Tumor
0.5
925
Tumor
0.5
558
Normal
0.5
358
Normal
0.5
917
Tumor
0.5
435
Tumor
0.5
331
Tumor
0.5
123
Tumor
0.4
135
Tumor
0.4
188
Normal
0.4
923
Tumor
0.4
513
Tumor
0.4
661
Tumor
0.4
536
Normal
0.4
355
Tumor
0.4
915
Tumor
0.4
737
Tumor
0.4
1043
Tumor
0.4
492
Normal
0.4
351
Tumor
0.4
568
Normal
0.4
385
Tumor
0.4
195
Tumor
0.4
427
Tumor
0.4
186
Normal
0.4
297
Tumor
0.4
267
Tumor
0.4
953
Tumor
0.4
921
Tumor
0.4
616
Normal
0.4
815
Tumor
0.4
525
Tumor
0.3
145
Tumor
0.3
785
Tumor
0.3
648
Normal
0.3
342
Normal
0.3
1025
Tumor
0.3
368
Normal
0.3
232
Normal
0.3
192
Normal
0.3
422
Normal
0.3
448
Normal
0.3
148
Normal
0.3
375
Tumor
0.3
363
Tumor
0.3
1044
Normal
0.3
481
Tumor
0.3
284
Normal
0.3
343
Tumor
0.3
161
Tumor
0.3
217
Tumor
0.3
286
Normal
0.3
228
Normal
0.3
852
Normal
0.3
352
Normal
0.3
1014
Normal
0.3
817
Tumor
0.3
477
Tumor
0.3
391
Tumor
0.3
698
Normal
0.3
484
Normal
0.3
957
Tumor
0.3
663
Tumor
0.2
813
Tumor
0.2
494
Normal
0.2
635
Tumor
0.2
955
Tumor
0.2
778
Normal
0.2
211
Tumor
0.2
393
Tumor
0.2
213
Tumor
0.2
354
Normal
0.2
487
Tumor
0.2
464
Normal
0.2
952
Normal
0.2
467
Tumor
0.2
636
Normal
0.2
262
Normal
0.2
916
Normal
0.2
666
Normal
0.2
396
Normal
0.2
341
Tumor
0.2
392
Normal
0.2
388
Normal
0.2
534
Normal
0.2
664
Normal
0.2
982
Normal
0.2
563
Tumor
0.2
515
Tumor
0.2
261
Tumor
0.2
628
Normal
0.2
851
Tumor
0.2
357
Tumor
0.2
672
Normal
0.2
142
Normal
0.2
344
Normal
0.2
312
Normal
0.2
223
Tumor
0.2
162
Normal
0.2
697
Tumor
0.2
814
Normal
0.2
571
Tumor
0.2
984
Normal
0.2
424
Normal
0.2
426
Normal
0.2
944
Normal
0.2
298
Normal
0.1
395
Tumor
0.1
125
Tumor
0.1
468
Normal
0.1
755
Tumor
0.1
858
Normal
0.1
131
Tumor
0.1
171
Tumor
0.1
498
Normal
0.1
572
Normal
0.1
1027
Tumor
0.1
918
Normal
0.1
777
Tumor
0.1
353
Tumor
0.1
384
Normal
0.1
514
Normal
0.1
696
Normal
0.1
258
Normal
0.1
721
Tumor
0.1
212
Normal
0.1
615
Tumor
0.1
474
Normal
0.1
641
Tumor
0.1
483
Tumor
0.1
471
Tumor
0.1
956
Normal
0.1
564
Normal
0.1
874
Normal
0.1
978
Normal
0.1
924
Normal
0.1
466
Normal
0.1
914
Normal
0.1
554
Normal
0.1
488
Normal
0.1
227
Tumor
0.1
172
Normal
0.1
738
Normal
0.1
452
Normal
0.1
662
Normal
0.1
423
Tumor
0.1
278
Normal
0.1
728
Normal
0.1
527
Tumor
0.1
528
Normal
0.1
1016
Normal
0.1
912
Normal
0.1
981
Tumor
0.1
113
Tumor
0.1
314
Normal
0.1
114
Normal
0.1
451
Tumor
0.1
413
Tumor
0.1
868
Normal
0.1
394
Normal
0.1
861
Tumor
0.1
742
Normal
0.1
1028
Normal
0.1
546
Normal
0.1
1022
Normal
0.1
456
Normal
0.1
132
Normal
0.1
1045
Tumor
0.1
723
Tumor
0.1
786
Normal
0.0
268
Normal
0.0
926
Normal
0.0
538
Normal
0.0
366
Normal
0.0
873
Tumor
0.0
881
Tumor
0.0
257
Tumor
0.0
618
Normal
0.0
1026
Normal
0.0
627
Tumor
0.0
574
Normal
0.0
713
Tumor
0.0
414
Normal
0.0
386
Normal
0.0
272
Normal
0.0
1031
Tumor
0.0
1042
Normal
0.0
517
Tumor
0.0
1015
Tumor
0.0
147
Tumor
0.0
913
Tumor
0.0
428
Normal
0.0
878
Normal
0.0
1032
Normal
0.0
196
Normal
0.0
444
Normal
0.0
744
Normal
0.0
524
Normal
0.0
478
Normal
0.0
214
Normal
0.0
938
Normal
0.0
332
Normal
0.0
328
Normal
0.0
412
Normal
0.0
824
Normal
0.0
1046
Normal
0.0
756
Normal
0.0
436
Normal
0.0
976
Normal
0.0
642
Normal
0.0
866
Normal
0.0
818
Normal
0.0
222
Normal
0.0
516
Normal
0.0
141
Tumor
0.0
146
Normal
0.0
461
Tumor
0.0
518
Normal
0.0
472
Normal
0.0
882
Normal
-0.1
362
Normal
-0.1
112
Tumor
-0.1
126
Normal
-0.1
136
Normal
-0.1
138
Normal
-0.1
137
Tumor
-0.1
741
Tumor
-0.1
191
Tumor
-0.1
416
Normal
-0.1
431
Tumor
-0.1
1041
Tumor
-0.1
966
Normal
-0.1
965
Tumor
-0.1
482
Normal
-0.1
365
Tumor
-0.1
415
Tumor
-0.1
383
Tumor
-0.1
111
Normal
-0.1
128
Normal
-0.1
218
Normal
-0.1
526
Normal
-0.1
864
Normal
-0.1
127
Tumor
-0.1
376
Normal
-0.1
465
Tumor
-0.1
124
Normal
-0.1
922
Normal
-0.1
716
Normal
-0.1
686
Normal
-0.1
877
Tumor
-0.1
954
Normal
-0.1
816
Normal
-0.1
884
Normal
-0.2
665
Tumor
-0.2
937
Tumor
-0.2
722
Normal
-0.2
714
Normal
-0.2
356
Normal
-0.2
975
Tumor
-0.2
446
Normal
-0.2
387
Tumor
-0.2
964
Normal
-0.2
224
Normal
-0.2
951
Tumor
-0.2
967
Tumor
-0.2
968
Normal
-0.2
367
Tumor
-0.2
434
Normal
-0.2
185
Tumor
-0.2
862
Normal
-0.2
221
Tumor
-0.2
823
Tumor
-0.2
462
Normal
-0.2
958
Normal
-0.2
364
Normal
-0.2
1021
Tumor
-0.2
695
Tumor
-0.3
911
Tumor
-0.3
557
Tumor
-0.3
685
Tumor
-0.3
867
Tumor
-0.3
433
Tumor
-0.3
724
Normal
-0.3
553
Tumor
-0.3
567
Tumor
-0.4
187
Tumor
-0.4
883
Tumor
-0.4
432
Normal
-0.4
977
Tumor
-0.4
443
Tumor
-0.4
445
Tumor
-0.5
271
Tumor
-0.5
963
Tumor
-0.5
743
Tumor
-0.5
231
Tumor
-0.6
715
Tumor
-0.6
425
Tumor
-0.6
537
Tumor
-0.8
863
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
