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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.7
nTPM
HPA Brain:
74.7
nTPM
GTEx:
52.7
nTPM
FANTOM5:
302.9
Scaled Tags Per Million
Pig:
70.7
nTPM
Mouse:
102.6
nTPM
Allen mouse:
7.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.7
Sample id
Sample description
nTPM
Amygdala nTPM: 74.7
2814
Male, age 76, right hemisphere
78.3
2514
Male, age 75, right hemisphere
77.9
1987
Female, age 91, left hemisphere
74.9
2695
Female, age 67, right hemisphere
72.2
2517
Female, age 94, left hemisphere
70.1
Basal amygdala nTPM: 68.1
2609
Male, age 75, right hemisphere
76.3
2243
Female, age 91, right hemisphere
75.3
2685
Female, age 94, left hemisphere
70.7
2110
Male, age 80, left hemisphere
68.5
1955
Male, age 76, both hemispheres
63.7
2827
Female, age 67, right hemisphere
54.0
Central amygdala nTPM: 74.4
2515
Male, age 75, right hemisphere
84.7
2239
Male, age 80, left hemisphere
76.0
1905
Male, age 76, both hemispheres
75.7
2701
Female, age 91, right hemisphere
69.0
2826
Female, age 94, left hemisphere
66.5
Corticomedial amygdala nTPM: 67.9
2829
Male, age 80, left hemisphere
77.7
2242
Female, age 91, right hemisphere
76.3
2428
Male, age 75, right hemisphere
75.0
2429
Female, age 94, left hemisphere
63.2
2240
Male, age 76, both hemispheres
62.5
2535
Female, age 67, right hemisphere
52.5
Lateral amygdala nTPM: 67.7
2516
Male, age 75, right hemisphere
80.8
2255
Female, age 91, right hemisphere
71.3
1883
Male, age 76, both hemispheres
70.3
2256
Male, age 80, left hemisphere
66.3
2534
Female, age 94, left hemisphere
61.4
2830
Female, age 67, right hemisphere
56.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 52.7
Samples: 152
Max nTPM: 104.2
Min nTPM: 24.0
Std nTPM: 13.4
Median nTPM: 51.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
104.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
89.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
88.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
82.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
78.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
76.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
75.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
74.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
74.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
74.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
74.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
73.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
73.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
71.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
70.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
70.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
69.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
69.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
69.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
67.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
67.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
66.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
66.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
66.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
65.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
65.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
64.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
63.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
62.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
61.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
61.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
61.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
60.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
60.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
60.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
59.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
59.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
59.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
59.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
59.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
58.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
58.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
58.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
58.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
57.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
57.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
57.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
57.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
57.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
57.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
57.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
56.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
56.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
56.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
56.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
55.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
54.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
54.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
54.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
54.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
54.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
53.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
53.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
53.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
52.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
52.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
52.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
52.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
51.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
51.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
51.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
51.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
51.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
50.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
50.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
49.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
49.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
49.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
48.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
48.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
48.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
48.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
48.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
47.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
47.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
47.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
47.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
45.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
45.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
45.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
44.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
44.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
43.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
43.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
43.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
42.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
42.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
42.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
42.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
42.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
41.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
41.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
41.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
41.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
40.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
40.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
39.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
39.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
38.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
38.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
37.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
37.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
37.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
37.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
36.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
36.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
36.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
36.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
34.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
33.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
32.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
32.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
31.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
30.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
30.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
29.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
29.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
24.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 102.6
Samples: 4
Max nTPM: 109.9
Min nTPM: 99.7
Sample A
Male
109.9
Sample B
Male
100.6
Sample C
Female
99.7
Sample D
Female
100.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.