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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCDN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
37.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
29.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
26.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
24.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
24.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
23.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
17.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
13.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
9.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCDN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
19.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
16.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
14.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
13.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
12.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
11.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
11.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
9.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
8.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
8.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
8.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
7.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
7.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
7.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
5.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
5.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
5.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
5.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
1.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCDN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
12.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
10.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
10.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
10.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
8.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
8.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
7.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
7.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
6.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
6.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
6.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NCDN is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
37.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
23.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
22.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
22.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
22.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
20.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
19.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
19.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
15.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
14.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
12.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
10.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
6.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
6.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.2
CPT0012280003
Tumor
0.8
CPT0065430003
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0078510003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0025230003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0078660003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0026410003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0019130003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0002370001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0086950003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0065690003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0012770003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0065450001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0023360001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0006730001
Normal
-0.4
CPT0092800003
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
