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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYT13 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
181.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
171.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
169.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
153.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
152.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
152.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
144.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
140.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
119.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
113.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
108.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
104.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
100.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
100.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
97.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
82.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
81.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
80.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
75.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
74.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
67.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
67.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
64.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
64.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
63.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
60.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
55.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
54.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
53.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
53.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
51.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
44.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
44.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
41.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
40.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
40.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
38.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
36.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
33.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
32.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
32.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
26.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYT13 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
170.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
141.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
128.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
106.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
102.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
98.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
96.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
94.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
94.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
93.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
93.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
92.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
87.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
86.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
84.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
84.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
82.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
81.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
78.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
73.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
70.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
69.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
68.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
66.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
65.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
65.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
63.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
62.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
59.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
59.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
59.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
58.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
55.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
54.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
54.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
54.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
51.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
50.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
50.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
50.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
49.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
48.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
48.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
48.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
46.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
46.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
45.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
42.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
42.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
41.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
41.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
40.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
39.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
38.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
38.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
38.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
38.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
38.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
36.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
36.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
35.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
35.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
35.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
33.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
32.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
31.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
31.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
30.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
30.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
30.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
30.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
29.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
29.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
29.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
29.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
28.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
25.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
25.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
24.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
21.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
20.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
16.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
16.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
10.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
9.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
8.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
7.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
7.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
7.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
7.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
6.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
6.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
6.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
6.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
6.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
5.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
5.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
5.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
5.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
5.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
5.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
5.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
4.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
4.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
4.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
4.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
4.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
4.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
4.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
3.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
3.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
3.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
3.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
3.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
3.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
3.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
3.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
3.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
3.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
3.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
3.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
3.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
3.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
3.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
2.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
2.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
2.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
2.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
2.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
2.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
2.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
2.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
2.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
2.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
2.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
2.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
2.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
2.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
1.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
1.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
1.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
1.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
1.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
1.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
1.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
1.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
1.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
0.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
0.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
0.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
0.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
0.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
0.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
0.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
0.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
0.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
0.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
0.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
0.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
0.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
0.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
0.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
0.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
0.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
0.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
0.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
0.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
0.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
0.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
0.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
0.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
0.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
0.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
0.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
0.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
0.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
0.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
0.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
0.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
0.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
0.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
0.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
0.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
0.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
0.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
0.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
0.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
0.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
0.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
0.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
0.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
0.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
0.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
0.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
0.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
0.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
0.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
0.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYT13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
410.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
199.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
105.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
68.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
63.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
58.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
53.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
51.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
50.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
46.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
45.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
43.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
42.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
41.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
40.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
35.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
33.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
31.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
25.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
4.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
4.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
3.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
3.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
3.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
3.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
3.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
3.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
3.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
2.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
2.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
2.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
1.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
0.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
0.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYT13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
141.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
138.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
127.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
119.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
76.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
69.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
67.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
66.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
65.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
61.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
52.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
51.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
51.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
50.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
50.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
49.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
48.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
48.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
47.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
47.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
45.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
44.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
40.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
40.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
39.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
36.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
35.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
35.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
30.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
27.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
21.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
21.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
20.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
17.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
15.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
3.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
3.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
3.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
2.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
2.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
1.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
0.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
0.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
0.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
