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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWTR1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
110.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
74.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
62.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
61.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
57.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
51.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
45.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
44.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
44.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
40.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
39.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
37.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
37.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
36.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
28.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
27.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
26.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
21.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
21.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
20.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
20.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
19.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
19.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
18.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
16.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
15.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
12.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
7.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
7.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
6.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
5.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
5.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
4.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
4.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
3.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
2.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
2.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWTR1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
231
Samples
Sample
Description
TPM
DO45279
0 years, male, NA, stage:3, alive, 1290 days
54.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
49.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
45.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
45.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
42.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
39.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
36.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
34.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
32.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
30.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
30.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
30.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
27.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
26.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
26.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
25.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
19.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
18.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
17.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
17.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
17.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
17.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
16.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
16.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
9.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
8.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
6.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
6.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
4.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
4.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
3.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
3.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
3.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
3.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
2.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
2.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
2.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
2.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
1.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
1.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
1.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
1.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.2
283
Tumor
0.9
545
Tumor
0.9
131
Tumor
0.9
916
Normal
0.9
473
Tumor
0.8
917
Tumor
0.7
943
Tumor
0.7
537
Tumor
0.7
921
Tumor
0.7
171
Tumor
0.7
517
Tumor
0.7
881
Tumor
0.6
415
Tumor
0.6
915
Tumor
0.6
112
Tumor
0.6
963
Tumor
0.6
311
Tumor
0.6
297
Tumor
0.6
483
Tumor
0.5
741
Tumor
0.5
685
Tumor
0.5
647
Tumor
0.5
447
Tumor
0.5
867
Tumor
0.5
525
Tumor
0.5
977
Tumor
0.5
351
Tumor
0.5
861
Tumor
0.5
477
Tumor
0.5
277
Tumor
0.5
425
Tumor
0.5
367
Tumor
0.5
975
Tumor
0.5
478
Normal
0.5
444
Normal
0.5
498
Normal
0.5
493
Tumor
0.5
1013
Tumor
0.5
455
Tumor
0.4
814
Normal
0.4
937
Tumor
0.4
355
Tumor
0.4
451
Tumor
0.4
965
Tumor
0.4
883
Tumor
0.4
383
Tumor
0.4
695
Tumor
0.4
863
Tumor
0.4
284
Normal
0.4
161
Tumor
0.3
538
Normal
0.3
617
Tumor
0.3
944
Normal
0.3
492
Normal
0.3
421
Tumor
0.3
924
Normal
0.3
523
Tumor
0.3
123
Tumor
0.3
878
Normal
0.3
433
Tumor
0.3
341
Tumor
0.3
983
Tumor
0.3
715
Tumor
0.3
976
Normal
0.3
257
Tumor
0.3
957
Tumor
0.3
285
Tumor
0.3
533
Tumor
0.3
487
Tumor
0.3
125
Tumor
0.3
463
Tumor
0.3
553
Tumor
0.3
744
Normal
0.3
755
Tumor
0.2
1042
Normal
0.2
873
Tumor
0.2
925
Tumor
0.2
1015
Tumor
0.2
497
Tumor
0.2
331
Tumor
0.2
866
Normal
0.2
465
Tumor
0.2
1025
Tumor
0.2
427
Tumor
0.2
147
Tumor
0.2
954
Normal
0.2
268
Normal
0.2
313
Tumor
0.2
431
Tumor
0.2
488
Normal
0.2
911
Tumor
0.2
874
Normal
0.2
918
Normal
0.2
923
Tumor
0.2
877
Tumor
0.2
491
Tumor
0.2
467
Tumor
0.2
221
Tumor
0.2
554
Normal
0.2
211
Tumor
0.2
384
Normal
0.2
864
Normal
0.2
524
Normal
0.2
471
Tumor
0.2
1026
Normal
0.2
192
Normal
0.2
261
Tumor
0.2
862
Normal
0.2
416
Normal
0.2
567
Tumor
0.2
868
Normal
0.2
271
Tumor
0.2
951
Tumor
0.1
113
Tumor
0.1
922
Normal
0.1
665
Tumor
0.1
817
Tumor
0.1
724
Normal
0.1
385
Tumor
0.1
536
Normal
0.1
641
Tumor
0.1
231
Tumor
0.1
958
Normal
0.1
135
Tumor
0.1
482
Normal
0.1
1041
Tumor
0.1
127
Tumor
0.1
461
Tumor
0.1
966
Normal
0.1
443
Tumor
0.1
952
Normal
0.1
1032
Normal
0.1
964
Normal
0.1
224
Normal
0.1
227
Tumor
0.1
1028
Normal
0.1
696
Normal
0.1
195
Tumor
0.1
967
Tumor
0.1
214
Normal
0.1
185
Tumor
0.1
635
Tumor
0.1
212
Normal
0.1
228
Normal
0.1
364
Normal
0.1
574
Normal
0.1
413
Tumor
0.1
474
Normal
0.1
472
Normal
0.1
671
Tumor
0.1
546
Normal
0.1
865
Tumor
0.1
852
Normal
0.1
267
Tumor
0.1
187
Tumor
0.1
126
Normal
0.1
375
Tumor
0.1
727
Tumor
0.1
1022
Normal
0.0
1021
Tumor
0.0
141
Tumor
0.0
824
Normal
0.0
535
Tumor
0.0
484
Normal
0.0
146
Normal
0.0
737
Tumor
0.0
573
Tumor
0.0
124
Normal
0.0
1046
Normal
0.0
664
Normal
0.0
534
Normal
0.0
528
Normal
0.0
327
Tumor
0.0
366
Normal
0.0
213
Tumor
0.0
913
Tumor
0.0
446
Normal
0.0
785
Tumor
0.0
1044
Normal
0.0
434
Normal
0.0
628
Normal
0.0
391
Tumor
0.0
494
Normal
0.0
111
Normal
0.0
137
Tumor
0.0
445
Tumor
0.0
926
Normal
0.0
436
Normal
0.0
481
Tumor
0.0
697
Tumor
0.0
884
Normal
0.0
412
Normal
0.0
363
Tumor
0.0
813
Tumor
-0.1
286
Normal
-0.1
368
Normal
-0.1
1031
Tumor
-0.1
956
Normal
-0.1
145
Tumor
-0.1
376
Normal
-0.1
361
Tumor
-0.1
857
Tumor
-0.1
514
Normal
-0.1
142
Normal
-0.1
393
Tumor
-0.1
981
Tumor
-0.1
778
Normal
-0.1
362
Normal
-0.1
411
Tumor
-0.1
392
Normal
-0.1
1016
Normal
-0.1
672
Normal
-0.1
984
Normal
-0.1
456
Normal
-0.1
686
Normal
-0.1
661
Tumor
-0.1
188
Normal
-0.1
728
Normal
-0.1
953
Tumor
-0.1
823
Tumor
-0.1
515
Tumor
-0.1
882
Normal
-0.1
222
Normal
-0.1
138
Normal
-0.1
557
Tumor
-0.1
136
Normal
-0.1
563
Tumor
-0.1
196
Normal
-0.1
432
Normal
-0.1
955
Tumor
-0.1
312
Normal
-0.1
162
Normal
-0.1
356
Normal
-0.1
666
Normal
-0.1
662
Normal
-0.1
742
Normal
-0.1
191
Tumor
-0.1
713
Tumor
-0.1
516
Normal
-0.1
968
Normal
-0.1
232
Normal
-0.1
223
Tumor
-0.1
386
Normal
-0.1
1027
Tumor
-0.1
716
Normal
-0.1
698
Normal
-0.2
394
Normal
-0.2
982
Normal
-0.2
298
Normal
-0.2
422
Normal
-0.2
618
Normal
-0.2
448
Normal
-0.2
262
Normal
-0.2
722
Normal
-0.2
714
Normal
-0.2
513
Tumor
-0.2
423
Tumor
-0.2
328
Normal
-0.2
218
Normal
-0.2
466
Normal
-0.2
777
Tumor
-0.2
564
Normal
-0.2
518
Normal
-0.2
128
Normal
-0.2
723
Tumor
-0.2
786
Normal
-0.2
396
Normal
-0.2
357
Tumor
-0.2
738
Normal
-0.2
571
Tumor
-0.2
818
Normal
-0.2
352
Normal
-0.2
464
Normal
-0.2
186
Normal
-0.2
642
Normal
-0.2
527
Tumor
-0.2
395
Tumor
-0.2
343
Tumor
-0.2
721
Tumor
-0.2
1014
Normal
-0.2
1045
Tumor
-0.2
132
Normal
-0.2
978
Normal
-0.2
572
Normal
-0.2
148
Normal
-0.2
568
Normal
-0.2
217
Tumor
-0.2
468
Normal
-0.2
435
Tumor
-0.2
745
Tumor
-0.2
388
Normal
-0.2
114
Normal
-0.2
756
Normal
-0.2
851
Tumor
-0.2
938
Normal
-0.3
816
Normal
-0.3
1043
Tumor
-0.3
636
Normal
-0.3
344
Normal
-0.3
558
Normal
-0.3
428
Normal
-0.3
414
Normal
-0.3
272
Normal
-0.3
858
Normal
-0.3
912
Normal
-0.3
278
Normal
-0.3
462
Normal
-0.3
365
Tumor
-0.3
424
Normal
-0.3
258
Normal
-0.3
815
Tumor
-0.3
746
Normal
-0.3
426
Normal
-0.3
452
Normal
-0.4
172
Normal
-0.4
648
Normal
-0.4
332
Normal
-0.4
914
Normal
-0.4
663
Tumor
-0.4
387
Tumor
-0.4
616
Normal
-0.4
342
Normal
-0.4
526
Normal
-0.5
627
Tumor
-0.5
314
Normal
-0.5
354
Normal
-0.6
358
Normal
-0.7
615
Tumor
-0.7
353
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
