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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RUFY3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
12.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
11.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
9.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
8.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
8.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
7.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
7.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
6.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
6.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
6.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
6.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
6.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
5.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
5.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
4.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
4.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
3.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
3.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
3.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
3.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
3.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
3.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
3.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
2.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
2.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RUFY3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
231
Samples
Sample
Description
TPM
DO23544
0 years, male, NA, stage:2, alive, 960 days
53.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
20.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
20.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
18.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
16.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
14.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
14.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
14.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
13.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
13.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
12.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
11.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
10.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
5.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
5.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
5.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
4.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
3.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
2.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
2.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
2.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
123
Tumor
0.8
125
Tumor
0.8
981
Tumor
0.7
327
Tumor
0.7
487
Tumor
0.7
523
Tumor
0.6
524
Normal
0.6
925
Tumor
0.6
955
Tumor
0.6
557
Tumor
0.5
271
Tumor
0.5
283
Tumor
0.5
1025
Tumor
0.5
341
Tumor
0.4
113
Tumor
0.4
526
Normal
0.4
926
Normal
0.4
817
Tumor
0.4
728
Normal
0.4
481
Tumor
0.4
861
Tumor
0.4
867
Tumor
0.4
756
Normal
0.4
434
Normal
0.4
518
Normal
0.4
514
Normal
0.4
914
Normal
0.4
395
Tumor
0.4
913
Tumor
0.4
436
Normal
0.4
141
Tumor
0.3
343
Tumor
0.3
528
Normal
0.3
492
Normal
0.3
424
Normal
0.3
858
Normal
0.3
978
Normal
0.3
911
Tumor
0.3
696
Normal
0.3
257
Tumor
0.3
966
Normal
0.3
558
Normal
0.3
142
Normal
0.3
451
Tumor
0.3
554
Normal
0.3
218
Normal
0.3
573
Tumor
0.3
666
Normal
0.3
724
Normal
0.3
648
Normal
0.3
952
Normal
0.3
482
Normal
0.3
414
Normal
0.3
755
Tumor
0.3
432
Normal
0.3
498
Normal
0.3
195
Tumor
0.3
462
Normal
0.3
136
Normal
0.3
468
Normal
0.3
786
Normal
0.3
862
Normal
0.3
1015
Tumor
0.3
922
Normal
0.3
353
Tumor
0.3
964
Normal
0.3
536
Normal
0.3
1022
Normal
0.3
956
Normal
0.3
866
Normal
0.3
722
Normal
0.3
286
Normal
0.3
912
Normal
0.3
915
Tumor
0.3
686
Normal
0.3
224
Normal
0.2
937
Tumor
0.2
874
Normal
0.2
516
Normal
0.2
864
Normal
0.2
478
Normal
0.2
738
Normal
0.2
965
Tumor
0.2
918
Normal
0.2
954
Normal
0.2
957
Tumor
0.2
916
Normal
0.2
396
Normal
0.2
1042
Normal
0.2
138
Normal
0.2
968
Normal
0.2
494
Normal
0.2
824
Normal
0.2
882
Normal
0.2
1028
Normal
0.2
538
Normal
0.2
344
Normal
0.2
661
Tumor
0.2
484
Normal
0.2
1044
Normal
0.2
446
Normal
0.2
616
Normal
0.2
721
Tumor
0.2
546
Normal
0.2
723
Tumor
0.2
356
Normal
0.2
464
Normal
0.2
268
Normal
0.2
223
Tumor
0.2
384
Normal
0.2
852
Normal
0.2
262
Normal
0.2
924
Normal
0.2
537
Tumor
0.2
188
Normal
0.2
534
Normal
0.2
212
Normal
0.2
472
Normal
0.2
1021
Tumor
0.2
428
Normal
0.2
672
Normal
0.2
778
Normal
0.2
284
Normal
0.2
1032
Normal
0.2
884
Normal
0.2
217
Tumor
0.2
868
Normal
0.2
132
Normal
0.2
114
Normal
0.2
386
Normal
0.2
124
Normal
0.2
228
Normal
0.2
664
Normal
0.2
714
Normal
0.2
426
Normal
0.1
364
Normal
0.1
553
Tumor
0.1
456
Normal
0.1
368
Normal
0.1
416
Normal
0.1
394
Normal
0.1
474
Normal
0.1
267
Tumor
0.1
567
Tumor
0.1
362
Normal
0.1
1026
Normal
0.1
388
Normal
0.1
851
Tumor
0.1
642
Normal
0.1
635
Tumor
0.1
328
Normal
0.1
572
Normal
0.1
742
Normal
0.1
352
Normal
0.1
525
Tumor
0.1
1016
Normal
0.1
741
Tumor
0.1
818
Normal
0.1
127
Tumor
0.1
415
Tumor
0.1
314
Normal
0.1
628
Normal
0.1
387
Tumor
0.1
976
Normal
0.1
1046
Normal
0.1
128
Normal
0.1
358
Normal
0.1
111
Normal
0.1
881
Tumor
0.1
467
Tumor
0.1
617
Tumor
0.1
222
Normal
0.1
444
Normal
0.1
963
Tumor
0.1
421
Tumor
0.1
716
Normal
0.1
466
Normal
0.1
392
Normal
0.1
196
Normal
0.1
261
Tumor
0.1
172
Normal
0.1
146
Normal
0.1
745
Tumor
0.1
232
Normal
0.1
982
Normal
0.1
126
Normal
0.1
958
Normal
0.1
422
Normal
0.1
944
Normal
0.1
938
Normal
0.1
412
Normal
0.1
568
Normal
0.1
488
Normal
0.1
662
Normal
0.1
984
Normal
0.1
1014
Normal
0.1
697
Tumor
0.1
744
Normal
0.1
491
Tumor
0.1
366
Normal
0.1
448
Normal
0.1
727
Tumor
0.1
376
Normal
0.1
148
Normal
0.0
393
Tumor
0.0
816
Normal
0.0
618
Normal
0.0
463
Tumor
0.0
471
Tumor
0.0
312
Normal
0.0
258
Normal
0.0
452
Normal
0.0
433
Tumor
0.0
1043
Tumor
0.0
162
Normal
0.0
564
Normal
0.0
361
Tumor
0.0
574
Normal
0.0
636
Normal
0.0
823
Tumor
0.0
145
Tumor
0.0
977
Tumor
0.0
367
Tumor
0.0
137
Tumor
0.0
354
Normal
0.0
698
Normal
0.0
1041
Tumor
0.0
627
Tumor
0.0
221
Tumor
0.0
814
Normal
0.0
477
Tumor
0.0
161
Tumor
0.0
665
Tumor
0.0
187
Tumor
0.0
447
Tumor
0.0
363
Tumor
0.0
535
Tumor
0.0
391
Tumor
-0.1
272
Normal
-0.1
1045
Tumor
-0.1
527
Tumor
-0.1
375
Tumor
-0.1
192
Normal
-0.1
413
Tumor
-0.1
921
Tumor
-0.1
332
Normal
-0.1
186
Normal
-0.1
435
Tumor
-0.1
746
Normal
-0.1
878
Normal
-0.1
493
Tumor
-0.1
533
Tumor
-0.1
214
Normal
-0.1
342
Normal
-0.1
383
Tumor
-0.1
473
Tumor
-0.1
191
Tumor
-0.1
743
Tumor
-0.1
185
Tumor
-0.1
713
Tumor
-0.1
171
Tumor
-0.1
695
Tumor
-0.1
455
Tumor
-0.1
278
Normal
-0.1
497
Tumor
-0.1
147
Tumor
-0.2
298
Normal
-0.2
423
Tumor
-0.2
461
Tumor
-0.2
231
Tumor
-0.2
443
Tumor
-0.2
513
Tumor
-0.2
917
Tumor
-0.2
563
Tumor
-0.2
943
Tumor
-0.2
517
Tumor
-0.2
883
Tumor
-0.2
285
Tumor
-0.2
135
Tumor
-0.2
663
Tumor
-0.2
857
Tumor
-0.2
213
Tumor
-0.2
545
Tumor
-0.2
385
Tumor
-0.2
983
Tumor
-0.2
873
Tumor
-0.3
227
Tumor
-0.3
355
Tumor
-0.3
211
Tumor
-0.3
431
Tumor
-0.3
785
Tumor
-0.3
313
Tumor
-0.3
615
Tumor
-0.3
465
Tumor
-0.3
483
Tumor
-0.3
715
Tumor
-0.3
647
Tumor
-0.3
365
Tumor
-0.3
877
Tumor
-0.4
427
Tumor
-0.4
1013
Tumor
-0.4
351
Tumor
-0.4
777
Tumor
-0.4
671
Tumor
-0.4
967
Tumor
-0.4
311
Tumor
-0.4
865
Tumor
-0.4
112
Tumor
-0.4
923
Tumor
-0.4
425
Tumor
-0.4
953
Tumor
-0.4
1031
Tumor
-0.4
571
Tumor
-0.5
515
Tumor
-0.5
975
Tumor
-0.5
685
Tumor
-0.5
1027
Tumor
-0.5
813
Tumor
-0.5
951
Tumor
-0.5
737
Tumor
-0.5
815
Tumor
-0.6
331
Tumor
-0.6
131
Tumor
-0.6
277
Tumor
-0.7
863
Tumor
-0.7
641
Tumor
-0.7
411
Tumor
-0.7
297
Tumor
-0.8
445
Tumor
-0.8
357
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
