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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGF1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
164.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
78.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
75.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
70.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
62.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
59.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
58.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
58.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
53.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
52.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
50.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
49.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
46.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
46.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
45.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
43.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
42.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
42.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
41.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
39.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
38.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
37.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
36.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
35.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
35.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
32.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
31.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
31.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
31.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
30.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
30.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
30.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
30.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
29.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
28.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
28.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
27.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
27.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
26.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
26.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
26.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
26.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
26.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
26.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
24.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
24.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
24.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
23.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
23.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
22.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
22.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
21.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
21.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
21.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
21.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
20.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
20.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
19.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
19.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
18.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
18.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
18.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
17.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
17.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
17.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
16.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
16.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
15.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
14.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
14.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
13.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
13.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
12.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
12.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
10.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
6.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
6.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
4.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
4.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
3.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
3.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
3.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
3.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
3.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
3.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
3.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
3.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
2.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
2.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
1.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
0.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
0.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGF1 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.6
Number of samples
231
Samples
Sample
Description
TPM
DO23539
0 years, male, NA, stage:1, alive, 1110 days
68.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
47.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
39.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
35.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
33.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
33.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
30.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
26.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
25.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
24.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
23.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
22.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
22.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
20.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
20.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
20.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
20.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
19.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
18.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
9.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
6.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
4.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
4.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
3.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
3.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
3.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
3.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
2.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
2.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
2.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
2.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
2.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
2.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
2.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
2.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
2.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
2.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
2.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
2.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
2.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
1.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
1.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
1.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
1.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
1.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
1.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
1.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
1.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
1.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
1.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
1.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
1.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
1.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
1.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
1.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
1.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
1.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
1.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
1.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
1.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
1.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
1.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
1.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
1.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
1.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
1.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
0.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
0.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
0.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
0.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
0.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
0.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
0.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
0.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
0.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
