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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BID is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
164.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
130.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
123.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
120.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
119.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
113.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
111.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
108.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
106.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
101.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
98.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
97.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
96.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
96.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
95.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
93.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
92.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
90.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
90.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
87.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
85.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
85.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
85.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
82.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
82.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
81.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
80.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
77.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
77.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
77.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
77.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
77.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
76.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
76.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
75.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
74.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
74.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
74.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
74.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
72.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
72.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
71.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
70.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
70.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
70.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
69.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
68.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
68.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
67.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
66.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
66.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
66.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
66.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
65.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
65.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
65.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
64.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
64.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
63.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
63.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
62.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
62.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
62.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
62.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
62.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
61.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
60.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
59.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
59.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
59.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
58.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
58.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
58.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
58.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
58.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
58.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
57.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
57.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
57.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
57.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
57.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
57.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
56.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
56.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
55.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
55.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
55.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
55.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
55.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
54.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
54.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
54.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
54.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
53.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
53.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
53.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
51.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
51.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
51.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
51.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
51.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
51.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
50.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
50.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
50.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
50.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
49.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
49.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
49.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
49.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
49.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
48.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
48.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
48.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
48.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
48.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
47.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
47.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
47.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
47.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
47.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
47.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
47.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
46.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
46.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
46.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
46.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
46.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
46.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
45.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
45.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
45.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
45.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
45.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
45.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
45.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
45.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
45.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
44.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
44.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
44.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
44.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
43.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
43.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
42.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
42.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
42.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
41.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
41.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
41.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
41.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
41.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
40.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
40.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
40.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
39.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
39.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
39.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
39.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
39.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
38.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
38.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
38.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
38.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
38.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
37.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
37.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
37.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
37.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
37.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
37.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
37.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
36.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
36.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
36.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
36.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
36.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
36.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
36.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
36.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
36.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
36.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
36.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
35.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
35.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
35.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
35.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
35.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
35.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
34.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
34.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
34.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
34.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
34.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
34.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
34.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
34.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
34.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
34.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
33.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
33.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
33.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
33.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
33.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
33.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
33.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
32.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
32.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
32.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
32.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
32.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
32.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
32.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
32.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
32.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
31.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
31.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
31.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
31.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
31.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
31.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
30.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
30.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
30.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
30.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
30.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
30.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
30.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
30.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
29.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
29.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
29.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
29.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
29.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
28.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
28.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
28.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
28.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
28.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
28.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
28.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
28.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
27.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
27.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
27.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
27.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
26.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
26.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
26.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
26.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
26.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
26.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
26.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
26.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
25.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
25.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
25.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
25.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
25.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
25.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
25.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
25.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
24.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
24.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
24.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
24.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
24.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
24.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
24.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
23.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
23.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
23.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
23.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
22.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
22.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
22.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
22.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
22.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
22.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
22.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
22.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
21.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
21.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
21.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
21.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
21.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
21.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
21.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
20.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
20.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
20.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
20.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
20.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
19.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
19.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
19.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
19.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
18.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
17.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
17.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
16.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
16.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
15.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
15.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
14.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
14.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
14.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
12.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
10.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BID is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.1
Number of samples
231
Samples
Sample
Description
TPM
DO50806
0 years, male, NA, stage:4, alive, 540 days
59.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
51.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
50.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
48.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
45.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
43.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
41.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
38.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
38.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
38.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
37.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
37.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
37.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
36.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
36.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
36.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
35.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
35.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
34.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
34.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
34.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
33.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
33.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
33.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
32.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
32.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
32.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
31.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
31.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
31.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
30.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
30.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
30.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
29.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
29.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
29.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
29.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
29.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
29.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
28.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
28.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
28.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
27.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
27.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
27.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
26.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
26.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
25.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
25.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
24.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
24.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
24.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
24.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
23.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
23.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
23.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
23.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
23.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
23.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
22.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
22.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
22.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
22.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
22.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
21.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
21.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
21.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
21.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
20.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
20.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
20.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
20.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
20.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
20.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
20.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
20.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
19.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
19.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
19.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
19.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
18.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
18.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
18.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
17.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
17.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
17.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
16.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
16.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
16.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
16.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
15.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
15.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
15.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
15.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
14.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
14.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
14.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
14.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
13.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
13.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
13.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
12.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
11.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
7.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
3.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
443
Tumor
1.2
267
Tumor
0.9
277
Tumor
0.8
331
Tumor
0.8
313
Tumor
0.6
567
Tumor
0.6
913
Tumor
0.6
465
Tumor
0.6
223
Tumor
0.5
445
Tumor
0.5
147
Tumor
0.5
428
Normal
0.5
477
Tumor
0.5
435
Tumor
0.4
925
Tumor
0.4
271
Tumor
0.4
426
Normal
0.4
128
Normal
0.4
395
Tumor
0.4
464
Normal
0.4
342
Normal
0.4
361
Tumor
0.4
341
Tumor
0.4
357
Tumor
0.4
432
Normal
0.4
421
Tumor
0.4
278
Normal
0.4
424
Normal
0.4
635
Tumor
0.4
388
Normal
0.4
387
Tumor
0.4
353
Tumor
0.4
124
Normal
0.3
647
Tumor
0.3
391
Tumor
0.3
533
Tumor
0.3
461
Tumor
0.3
132
Normal
0.3
312
Normal
0.3
113
Tumor
0.3
452
Normal
0.3
425
Tumor
0.3
314
Normal
0.3
112
Tumor
0.3
563
Tumor
0.3
114
Normal
0.3
136
Normal
0.3
126
Normal
0.3
427
Tumor
0.3
615
Tumor
0.3
1045
Tumor
0.3
297
Tumor
0.3
436
Normal
0.3
394
Normal
0.3
755
Tumor
0.3
352
Normal
0.3
571
Tumor
0.3
1021
Tumor
0.3
365
Tumor
0.3
145
Tumor
0.2
386
Normal
0.2
111
Normal
0.2
358
Normal
0.2
648
Normal
0.2
423
Tumor
0.2
396
Normal
0.2
332
Normal
0.2
221
Tumor
0.2
422
Normal
0.2
617
Tumor
0.2
462
Normal
0.2
446
Normal
0.2
392
Normal
0.2
362
Normal
0.2
298
Normal
0.2
463
Tumor
0.2
217
Tumor
0.2
851
Tumor
0.2
742
Normal
0.2
414
Normal
0.2
815
Tumor
0.2
222
Normal
0.2
641
Tumor
0.2
865
Tumor
0.2
127
Tumor
0.2
138
Normal
0.2
525
Tumor
0.2
663
Tumor
0.2
642
Normal
0.1
187
Tumor
0.1
466
Normal
0.1
311
Tumor
0.1
262
Normal
0.1
196
Normal
0.1
344
Normal
0.1
618
Normal
0.1
616
Normal
0.1
727
Tumor
0.1
628
Normal
0.1
914
Normal
0.1
744
Normal
0.1
413
Tumor
0.1
268
Normal
0.1
141
Tumor
0.1
258
Normal
0.1
666
Normal
0.1
672
Normal
0.1
232
Normal
0.1
434
Normal
0.1
1043
Tumor
0.1
366
Normal
0.1
188
Normal
0.1
376
Normal
0.1
662
Normal
0.1
186
Normal
0.1
368
Normal
0.1
218
Normal
0.1
191
Tumor
0.1
574
Normal
0.1
148
Normal
0.1
493
Tumor
0.1
195
Tumor
0.1
468
Normal
0.1
482
Normal
0.1
444
Normal
0.1
214
Normal
0.1
921
Tumor
0.1
356
Normal
0.1
384
Normal
0.1
738
Normal
0.1
272
Normal
0.1
123
Tumor
0.1
137
Tumor
0.1
557
Tumor
0.0
467
Tumor
0.0
664
Normal
0.0
472
Normal
0.0
568
Normal
0.0
135
Tumor
0.0
982
Normal
0.0
728
Normal
0.0
343
Tumor
0.0
354
Normal
0.0
162
Normal
0.0
746
Normal
0.0
534
Normal
0.0
257
Tumor
0.0
367
Tumor
0.0
456
Normal
0.0
471
Tumor
0.0
484
Normal
0.0
228
Normal
0.0
142
Normal
0.0
172
Normal
0.0
723
Tumor
0.0
1016
Normal
0.0
327
Tumor
0.0
483
Tumor
0.0
433
Tumor
0.0
416
Normal
0.0
786
Normal
0.0
573
Tumor
0.0
213
Tumor
0.0
627
Tumor
0.0
737
Tumor
0.0
375
Tumor
0.0
636
Normal
0.0
724
Normal
0.0
1046
Normal
-0.1
878
Normal
-0.1
185
Tumor
-0.1
745
Tumor
-0.1
816
Normal
-0.1
393
Tumor
-0.1
698
Normal
-0.1
146
Normal
-0.1
492
Normal
-0.1
661
Tumor
-0.1
497
Tumor
-0.1
824
Normal
-0.1
537
Tumor
-0.1
937
Tumor
-0.1
474
Normal
-0.1
285
Tumor
-0.1
448
Normal
-0.1
695
Tumor
-0.1
224
Normal
-0.1
862
Normal
-0.1
874
Normal
-0.1
411
Tumor
-0.1
558
Normal
-0.1
572
Normal
-0.1
823
Tumor
-0.1
777
Tumor
-0.2
868
Normal
-0.2
1044
Normal
-0.2
513
Tumor
-0.2
528
Normal
-0.2
756
Normal
-0.2
231
Tumor
-0.2
286
Normal
-0.2
721
Tumor
-0.2
968
Normal
-0.2
125
Tumor
-0.2
912
Normal
-0.2
494
Normal
-0.2
1041
Tumor
-0.2
866
Normal
-0.2
161
Tumor
-0.2
1026
Normal
-0.2
478
Normal
-0.2
882
Normal
-0.2
364
Normal
-0.2
858
Normal
-0.2
481
Tumor
-0.2
778
Normal
-0.2
171
Tumor
-0.2
864
Normal
-0.2
918
Normal
-0.2
722
Normal
-0.2
975
Tumor
-0.2
785
Tumor
-0.2
192
Normal
-0.2
328
Normal
-0.2
261
Tumor
-0.2
447
Tumor
-0.2
923
Tumor
-0.2
714
Normal
-0.2
451
Tumor
-0.2
383
Tumor
-0.2
498
Normal
-0.2
488
Normal
-0.2
546
Normal
-0.2
671
Tumor
-0.2
431
Tumor
-0.3
212
Normal
-0.3
415
Tumor
-0.3
867
Tumor
-0.3
523
Tumor
-0.3
1028
Normal
-0.3
743
Tumor
-0.3
455
Tumor
-0.3
966
Normal
-0.3
564
Normal
-0.3
955
Tumor
-0.3
818
Normal
-0.3
857
Tumor
-0.3
817
Tumor
-0.3
957
Tumor
-0.3
696
Normal
-0.3
976
Normal
-0.3
873
Tumor
-0.3
983
Tumor
-0.3
284
Normal
-0.3
535
Tumor
-0.3
924
Normal
-0.3
363
Tumor
-0.3
952
Normal
-0.3
1022
Normal
-0.3
951
Tumor
-0.3
967
Tumor
-0.3
665
Tumor
-0.3
1032
Normal
-0.4
1015
Tumor
-0.4
852
Normal
-0.4
884
Normal
-0.4
515
Tumor
-0.4
977
Tumor
-0.4
538
Normal
-0.4
926
Normal
-0.4
883
Tumor
-0.4
917
Tumor
-0.4
984
Normal
-0.4
351
Tumor
-0.4
686
Normal
-0.4
922
Normal
-0.4
536
Normal
-0.4
412
Normal
-0.4
697
Tumor
-0.4
863
Tumor
-0.4
1014
Normal
-0.4
514
Normal
-0.4
916
Normal
-0.4
978
Normal
-0.4
814
Normal
-0.4
517
Tumor
-0.4
953
Tumor
-0.4
861
Tumor
-0.5
964
Normal
-0.5
554
Normal
-0.5
944
Normal
-0.5
518
Normal
-0.5
716
Normal
-0.5
1042
Normal
-0.5
1031
Tumor
-0.5
943
Tumor
-0.5
981
Tumor
-0.5
881
Tumor
-0.5
965
Tumor
-0.5
487
Tumor
-0.5
355
Tumor
-0.5
227
Tumor
-0.6
545
Tumor
-0.6
938
Normal
-0.6
491
Tumor
-0.6
385
Tumor
-0.6
283
Tumor
-0.6
1025
Tumor
-0.6
954
Normal
-0.6
956
Normal
-0.6
524
Normal
-0.6
1013
Tumor
-0.6
211
Tumor
-0.6
911
Tumor
-0.6
553
Tumor
-0.7
526
Normal
-0.7
713
Tumor
-0.7
131
Tumor
-0.7
516
Normal
-0.7
813
Tumor
-0.8
877
Tumor
-0.8
1027
Tumor
-0.8
963
Tumor
-0.8
473
Tumor
-0.8
958
Normal
-0.9
527
Tumor
-0.9
741
Tumor
-0.9
715
Tumor
-1.0
915
Tumor
-1.0
685
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
