HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.5 nTPM
HPA Brain:27.8 nTPM
GTEx:16.5 nTPM
FANTOM5:60.4 Scaled Tags Per Million
Pig:26.6 nTPM
Mouse:58.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021220Antibody HPA050722
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.8
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
2529 Female, age 94, left hemisphere 32.7
2621 Female, age 67, right hemisphere 27.1
1898 Male, age 80, left hemisphere 25.2
2148 Female, age 91, left hemisphere 24.7
1855 Male, age 76, left hemisphere 23.5
1911 Female, age 85, right hemisphere 22.9
Dentate gyrus
nTPM: 24.0
2530 Female, age 94, left hemisphere 26.0
2528 Male, age 74, both hemispheres 25.8
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 23.1
1927 Female, age 91, both hemispheres 22.8
2531 Female, age 67, both hemispheres 22.2
Entorhinal gyrus
nTPM: 26.1
2117 Female, age 91, right hemisphere 29.6
2764 Male, age 80, right hemisphere 27.6
2686 Male, age 75, right hemisphere 27.4
1938 Female, age 85, left hemisphere 25.7
2613 Female, age 94, left hemisphere 23.9
1787 Male, age 76, left hemisphere 22.5
Hippocampus, CA1
nTPM: 27.3
2082 Female, age 91, right hemisphere 36.1
2527 Male, age 74, both hemispheres 30.0
2749 Male, age 80, left hemisphere 28.1
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 20.1
Hippocampus, CA2
nTPM: 27.3
2113 Female, age 91, right hemisphere 34.0
2249 Male, age 74, both hemispheres 31.4
1940 Female, age 85, left hemisphere 29.8
2437 Female, age 94, left hemisphere 24.8
1963 Male, age 80, left hemisphere 22.2
1892 Male, age 76, both hemispheres 21.6
Hippocampus, CA3
nTPM: 26.3
2137 Male, age 80, left hemisphere 36.1
2436 Male, age 74, both hemispheres 30.8
1891 Female, age 85, both hemispheres 25.4
2861 Female, age 67, both hemispheres 22.5
1867 Male, age 76, both hemispheres 22.0
2620 Female, age 94, left hemisphere 21.0
Parahippocampal cortex
nTPM: 26.7
1990 Female, age 91, right hemisphere 29.3
2245 Female, age 91, both hemispheres 28.9
2250 Female, age 67, right hemisphere 28.6
2532 Female, age 72, left hemisphere 28.3
1850 Male, age 80, both hemispheres 27.7
2018 Male, age 76, both hemispheres 26.1
2622 Female, age 67, right hemisphere 25.8
2692 Male, age 74, both hemispheres 25.1
1933 Female, age 85, both hemispheres 24.4
2693 Female, age 94, both hemispheres 22.9
Perirhinal gyrus
nTPM: 27.8
2521 Female, age 94, right hemisphere 31.4
1847 Female, age 91, left hemisphere 30.2
1794 Male, age 80, right hemisphere 28.7
1841 Female, age 85, right hemisphere 24.3
2848 Male, age 76, right hemisphere 24.2
Subiculum
nTPM: 27.8
1901 Male, age 80, both hemispheres 29.3
2729 Female, age 91, right hemisphere 29.3
2438 Female, age 94, left hemisphere 28.7
2619 Male, age 74, both hemispheres 27.8
1977 Female, age 85, both hemispheres 27.0
2042 Male, age 76, both hemispheres 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 37.2
Min nTPM: 9.3
Std nTPM: 3.3
Median nTPM: 16.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 37.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 25.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 23.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 22.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 22.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 21.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 21.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.4
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 49.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.6
Pig sample Sample description nTPM
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 23.5
Sample A Female 32.2
Sample B Female 23.5
Sample C Male 24.8
Sample D Male 26.0
Dorsal hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 30.2
Min nTPM: 21.2
Sample A Female 30.2
Sample B Female 24.9
Sample C Male 30.2
Sample D Male 21.2
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.6
Sample A Female 28.1
Sample B Female 26.6
Sample C Male 25.1
Sample D Male 22.6
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.0
Sample A Female 27.3
Sample B Female 21.0
Sample C Male 28.3
Sample D Male 23.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 58.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 68.7
Min nTPM: 53.3
Sample A Male 53.3
Sample B Male 54.2
Sample C Female 56.4
Sample D Female 68.7
Hippocampal formation
nTPM: 54.8
Samples: 4

Max nTPM: 57.1
Min nTPM: 52.5
Sample A Male 55.3
Sample B Male 54.2
Sample C Female 57.1
Sample D Female 52.5

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