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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA3B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
79.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
45.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
36.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
32.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
29.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
25.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
25.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
24.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
13.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA3B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
151.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
124.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
112.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
57.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
52.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
47.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
45.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
44.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
43.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
41.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
36.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
35.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
32.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
32.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
31.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
24.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
23.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
22.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
21.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
21.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
20.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
19.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
19.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
19.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
16.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
15.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
13.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
9.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
9.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
9.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
8.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
8.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
7.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
7.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
7.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
7.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
7.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
7.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
7.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
7.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
6.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
6.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
6.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
6.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
6.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
6.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
6.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
6.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
6.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
6.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
6.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
6.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
5.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
5.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
5.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
5.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
5.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
5.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
5.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
5.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
5.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
5.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
5.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
5.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
5.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
5.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
5.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
5.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
5.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
5.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
5.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
4.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
4.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
4.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
4.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
4.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
4.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
4.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
4.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
4.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
4.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
4.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
4.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
4.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
4.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
4.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
4.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
4.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
4.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
4.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
4.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
4.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
4.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
4.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
4.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
4.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
4.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
4.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
4.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
4.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
4.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
4.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
4.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
4.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
4.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
3.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
3.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
3.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
3.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
3.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
3.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
3.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
3.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
3.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
3.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
3.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
3.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
3.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
3.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
3.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
3.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
3.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
3.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
3.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
3.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
3.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
3.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
3.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
3.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
3.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
3.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
3.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
3.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
3.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
3.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
3.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
3.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
3.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
3.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
2.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
2.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
2.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
2.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
2.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
2.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
2.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
2.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
2.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
2.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
2.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
2.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
2.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
2.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
2.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
2.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
2.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
2.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
2.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
2.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
2.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
2.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
2.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
2.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
2.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
2.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
2.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
2.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
2.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
2.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
2.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
2.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
2.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
2.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
1.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
1.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
1.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
1.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
1.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
1.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
1.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
1.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
1.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
1.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
1.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
0.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
0.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
0.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
0.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
0.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
0.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA3B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
128.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
75.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
73.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
51.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
46.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
41.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
38.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
36.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
31.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
31.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
11.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
9.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
9.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
8.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
8.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
7.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
7.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
6.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
6.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
5.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
5.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
5.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
5.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
4.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
4.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
4.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
4.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
4.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
4.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
3.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
3.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
2.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
2.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
2.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
1.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
0.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
0.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA3B is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
199.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
183.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
182.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
170.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
169.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
146.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
126.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
111.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
104.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
101.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
91.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
89.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
85.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
85.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
81.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
75.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
74.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
72.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
72.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
72.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
71.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
70.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
70.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
69.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
67.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
66.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
66.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
66.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
65.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
63.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
63.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
62.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
62.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
61.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
60.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
57.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
57.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
56.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
56.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
56.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
54.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
54.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
54.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
52.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
51.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
50.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
50.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
49.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
48.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
48.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
47.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
46.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
46.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
46.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
46.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
43.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
42.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
42.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
42.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
42.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
40.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
40.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
40.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
40.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
40.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
39.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
39.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
39.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
39.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
39.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
38.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
38.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
38.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
38.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
36.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
35.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
35.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
35.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
34.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
34.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
34.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
33.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
33.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
32.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
32.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
31.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
30.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
30.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
30.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
29.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
29.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
28.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
28.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
26.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
26.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
25.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
23.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
22.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
22.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
22.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
10.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
6.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0013790003
Normal
1.9
CPT0076330003
Tumor
1.1
CPT0084560003
Tumor
1.1
CPT0011240003
Tumor
1.0
CPT0063630003
Tumor
1.0
CPT0012920003
Normal
1.0
CPT0012290003
Normal
1.0
CPT0078530001
Normal
0.9
CPT0025060001
Normal
0.8
CPT0012180003
Tumor
0.8
CPT0088920001
Normal
0.8
CPT0012570003
Normal
0.8
CPT0010120001
Normal
0.7
CPT0026420001
Normal
0.7
CPT0015910003
Tumor
0.7
CPT0006950001
Normal
0.7
CPT0066480003
Tumor
0.7
CPT0077140001
Normal
0.6
CPT0077500001
Normal
0.6
CPT0063330001
Normal
0.6
CPT0007860003
Tumor
0.6
CPT0006730001
Normal
0.6
CPT0075570001
Normal
0.6
CPT0012090003
Normal
0.6
CPT0012770003
Normal
0.5
CPT0092310003
Normal
0.5
CPT0019990003
Tumor
0.5
CPT0014470001
Normal
0.5
CPT0077310003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0079510001
Normal
0.5
CPT0077320001
Normal
0.5
CPT0078840001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0009080003
Normal
0.4
CPT0069190001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0018250001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0001270001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0002350011
Tumor
0.3
CPT0088570001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0001510001
Normal
0.3
CPT0020020001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0006530001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0075170001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0084590001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0082010001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0007870001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0006900003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0079300001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0001500009
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0081600003
Tumor
-0.5
CPT0088630003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0014160003
Tumor
-0.6
CPT0012640003
Normal
-0.6
CPT0065430003
Tumor
-0.6
CPT0025580004
Tumor
-0.6
CPT0017410003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0065810003
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0014450004
Tumor
-0.7
CPT0086870003
Tumor
-0.7
CPT0012670003
Tumor
-0.7
CPT0026410003
Tumor
-0.8
CPT0009000003
Tumor
-0.8
CPT0010110003
Tumor
-0.8
CPT0009060003
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0088480003
Tumor
-0.8
CPT0025050003
Tumor
-0.8
CPT0024670003
Tumor
-0.9
CPT0075130003
Tumor
-0.9
CPT0012280003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0086360003
Tumor
-0.9
CPT0078930003
Tumor
-1.0
CPT0092730003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0001340003
Tumor
-1.0
CPT0001540009
Tumor
-1.1
CPT0001220008
Tumor
-1.1
CPT0079270003
Tumor
-1.2
CPT0071150004
Tumor
-1.3
CPT0012370003
Tumor
-1.5
CPT0019130003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0014370004
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0079000001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0010160003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0000890001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
