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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP5C is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
82.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
74.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
66.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
60.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
59.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
58.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
52.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
52.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
52.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
51.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
49.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
48.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
45.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
45.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
45.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
44.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
44.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
42.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
42.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
41.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
41.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
41.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
37.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
37.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
37.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
37.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
35.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
34.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
33.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
33.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
33.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
33.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
32.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
30.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
30.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
30.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
29.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
28.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
27.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
26.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
25.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
24.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
19.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
15.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP5C is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
65.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
58.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
43.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
42.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
41.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
41.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
38.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
38.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
38.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
37.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
36.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
36.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
36.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
36.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
36.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
36.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
36.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
34.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
34.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
34.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
33.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
33.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
33.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
33.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
33.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
33.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
32.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
32.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
32.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
32.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
32.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
32.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
31.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
31.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
30.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
30.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
30.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
30.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
30.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
30.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
29.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
29.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
29.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
29.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
29.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
28.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
28.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
28.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
28.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
28.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
28.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
28.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
28.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
27.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
27.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
27.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
27.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
27.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
27.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
27.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
27.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
26.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
26.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
26.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
25.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
25.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
25.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
25.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
25.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
25.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
25.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
25.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
25.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
25.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
25.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
24.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
24.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
24.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
24.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
23.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
23.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
23.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
23.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
23.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
23.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
23.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
22.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
22.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
22.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
22.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
20.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
20.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
19.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
19.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
19.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
19.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
17.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
16.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
16.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
16.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
14.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP5C is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
33.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
33.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
32.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
30.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
29.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
28.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
28.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
26.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
23.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
23.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
18.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
14.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP5C is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
63.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
58.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
54.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
53.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
50.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
49.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
48.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
48.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
46.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
45.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
44.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
44.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
43.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
42.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
41.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
41.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
40.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
40.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
40.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
40.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
39.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
39.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
39.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
38.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
38.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
37.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
37.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
37.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
36.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
36.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
36.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
35.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
35.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
35.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
35.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
34.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
34.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
33.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
33.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
33.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
33.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
32.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
32.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
32.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
31.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
31.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
30.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
30.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
30.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
30.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
29.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
29.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
29.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
29.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
28.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
28.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
28.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
28.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
27.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
27.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
27.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
26.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
26.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
25.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
25.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
24.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
24.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
24.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
23.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
23.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
22.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
22.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
22.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
21.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
21.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
20.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
18.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
16.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
16.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
16.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.6
CPT0079180003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0012640003
Normal
0.4
CPT0000640003
Tumor
0.4
CPT0077110003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0071150004
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0088900003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0069010001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0064370003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0012550003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0065450001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0010170001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0088780001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0075130003
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0015730003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0065750003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0078800003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0077310003
Tumor
-0.4
CPT0001180009
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
