HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:26.0 nTPM
HPA Brain:60.5 nTPM
GTEx:26.0 nTPM
FANTOM5:28.8 Scaled Tags Per Million
Pig:99.2 nTPM
Mouse:42.0 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072273
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 60.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.3
1898 Male, age 80, left hemisphere 58.5
2529 Female, age 94, left hemisphere 58.5
2621 Female, age 67, right hemisphere 53.0
1855 Male, age 76, left hemisphere 50.9
1911 Female, age 85, right hemisphere 50.4
2148 Female, age 91, left hemisphere 48.4
Dentate gyrus
nTPM: 50.8
2010 Male, age 76, both hemispheres 53.9
2246 Female, age 85, both hemispheres 52.8
1927 Female, age 91, both hemispheres 51.7
2530 Female, age 94, left hemisphere 51.7
2528 Male, age 74, both hemispheres 48.2
2531 Female, age 67, both hemispheres 46.4
Entorhinal gyrus
nTPM: 56.5
1938 Female, age 85, left hemisphere 64.3
2117 Female, age 91, right hemisphere 58.8
2686 Male, age 75, right hemisphere 55.8
2764 Male, age 80, right hemisphere 54.6
2613 Female, age 94, left hemisphere 53.3
1787 Male, age 76, left hemisphere 52.4
Hippocampus, CA1
nTPM: 56.1
2749 Male, age 80, left hemisphere 66.1
2527 Male, age 74, both hemispheres 58.7
1873 Female, age 85, both hemispheres 56.5
2082 Female, age 91, right hemisphere 51.3
2045 Male, age 76, both hemispheres 48.2
Hippocampus, CA2
nTPM: 55.2
1963 Male, age 80, left hemisphere 66.4
1892 Male, age 76, both hemispheres 61.2
2113 Female, age 91, right hemisphere 55.3
2437 Female, age 94, left hemisphere 50.4
1940 Female, age 85, left hemisphere 49.2
2249 Male, age 74, both hemispheres 48.4
Hippocampus, CA3
nTPM: 52.1
2137 Male, age 80, left hemisphere 60.3
1867 Male, age 76, both hemispheres 56.8
1891 Female, age 85, both hemispheres 56.5
2861 Female, age 67, both hemispheres 48.2
2436 Male, age 74, both hemispheres 47.6
2620 Female, age 94, left hemisphere 42.8
Parahippocampal cortex
nTPM: 56.7
1850 Male, age 80, both hemispheres 65.6
2692 Male, age 74, both hemispheres 60.9
1933 Female, age 85, both hemispheres 60.8
1990 Female, age 91, right hemisphere 58.4
2532 Female, age 72, left hemisphere 57.4
2245 Female, age 91, both hemispheres 56.5
2693 Female, age 94, both hemispheres 53.3
2622 Female, age 67, right hemisphere 52.6
2018 Male, age 76, both hemispheres 51.4
2250 Female, age 67, right hemisphere 49.9
Perirhinal gyrus
nTPM: 60.5
1847 Female, age 91, left hemisphere 64.6
1794 Male, age 80, right hemisphere 63.4
2848 Male, age 76, right hemisphere 61.3
1841 Female, age 85, right hemisphere 61.0
2521 Female, age 94, right hemisphere 52.1
Subiculum
nTPM: 55.3
2438 Female, age 94, left hemisphere 64.2
1977 Female, age 85, both hemispheres 57.1
1901 Male, age 80, both hemispheres 56.0
2619 Male, age 74, both hemispheres 55.0
2729 Female, age 91, right hemisphere 51.9
2042 Male, age 76, both hemispheres 47.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 38.1
Min nTPM: 16.3
Std nTPM: 3.6
Median nTPM: 25.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 38.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 36.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 35.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 33.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 33.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 33.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 32.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 32.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 31.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.8
FF:10153-102I9 76 years, female 39.0
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 99.2
Pig sample Sample description nTPM
Subiculum
nTPM: 89.3
Samples: 4

Max nTPM: 124.1
Min nTPM: 72.7
Sample A Female 124.1
Sample B Female 84.1
Sample C Male 76.1
Sample D Male 72.7
Dorsal hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 92.3
Min nTPM: 65.8
Sample A Female 92.3
Sample B Female 78.6
Sample C Male 84.7
Sample D Male 65.8
Entorhinal cortex
nTPM: 99.2
Samples: 4

Max nTPM: 120.6
Min nTPM: 87.8
Sample A Female 93.7
Sample B Female 120.6
Sample C Male 94.6
Sample D Male 87.8
Ventral hippocampus
nTPM: 80.2
Samples: 4

Max nTPM: 90.1
Min nTPM: 71.8
Sample A Female 83.9
Sample B Female 71.8
Sample C Male 90.1
Sample D Male 75.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 38.2
Sample A Male 38.2
Sample B Male 43.2
Sample C Female 41.6
Sample D Female 45.0
Hippocampal formation
nTPM: 41.6
Samples: 4

Max nTPM: 43.3
Min nTPM: 37.4
Sample A Male 43.1
Sample B Male 43.3
Sample C Female 42.5
Sample D Female 37.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
70473969 Antisense, RP_050614_04_F06, Mouse strain C57BL/6J (56 days, male) 2.2
71211278 Antisense, RP_050816_01_B02, Mouse strain C57BL/6J (56 days, male) 1.1

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