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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WIZ is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
65.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
34.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
27.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
25.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
23.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
22.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
21.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
21.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
20.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
19.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
18.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
17.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
16.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
16.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
16.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
15.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
15.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
15.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
13.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
11.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
11.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
11.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
10.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
10.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
10.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
8.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
8.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
8.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
7.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
7.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
6.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
6.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
6.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WIZ is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
231
Samples
Sample
Description
TPM
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
32.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
23.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
22.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
18.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
16.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
16.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
13.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
13.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
13.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
11.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
11.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
11.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
10.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
9.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
9.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
9.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
8.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
8.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
6.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
4.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
4.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
661
Tumor
1.8
967
Tumor
1.7
743
Tumor
1.3
285
Tumor
1.1
737
Tumor
1.0
131
Tumor
0.9
965
Tumor
0.9
463
Tumor
0.9
921
Tumor
0.8
425
Tumor
0.8
727
Tumor
0.8
951
Tumor
0.8
865
Tumor
0.8
473
Tumor
0.8
277
Tumor
0.8
467
Tumor
0.8
355
Tumor
0.7
331
Tumor
0.7
983
Tumor
0.7
497
Tumor
0.7
493
Tumor
0.7
267
Tumor
0.7
881
Tumor
0.7
351
Tumor
0.6
923
Tumor
0.6
943
Tumor
0.6
815
Tumor
0.6
435
Tumor
0.6
715
Tumor
0.6
523
Tumor
0.6
271
Tumor
0.6
817
Tumor
0.6
231
Tumor
0.6
112
Tumor
0.5
283
Tumor
0.5
413
Tumor
0.5
297
Tumor
0.5
813
Tumor
0.5
823
Tumor
0.5
1021
Tumor
0.5
533
Tumor
0.5
171
Tumor
0.4
431
Tumor
0.4
777
Tumor
0.4
221
Tumor
0.4
963
Tumor
0.4
411
Tumor
0.4
785
Tumor
0.4
663
Tumor
0.4
977
Tumor
0.4
471
Tumor
0.4
513
Tumor
0.4
818
Normal
0.4
917
Tumor
0.4
814
Normal
0.4
641
Tumor
0.4
517
Tumor
0.4
525
Tumor
0.4
483
Tumor
0.4
261
Tumor
0.4
375
Tumor
0.3
232
Normal
0.3
361
Tumor
0.3
695
Tumor
0.3
953
Tumor
0.3
671
Tumor
0.3
567
Tumor
0.3
857
Tumor
0.3
1031
Tumor
0.3
851
Tumor
0.3
665
Tumor
0.3
415
Tumor
0.3
311
Tumor
0.3
363
Tumor
0.3
545
Tumor
0.3
455
Tumor
0.3
447
Tumor
0.3
534
Normal
0.3
123
Tumor
0.3
385
Tumor
0.3
384
Normal
0.3
272
Normal
0.3
262
Normal
0.3
391
Tumor
0.3
125
Tumor
0.3
571
Tumor
0.3
858
Normal
0.2
554
Normal
0.2
786
Normal
0.2
461
Tumor
0.2
1025
Tumor
0.2
1013
Tumor
0.2
553
Tumor
0.2
937
Tumor
0.2
161
Tumor
0.2
647
Tumor
0.2
975
Tumor
0.2
365
Tumor
0.2
478
Normal
0.2
877
Tumor
0.2
546
Normal
0.2
445
Tumor
0.2
466
Normal
0.2
746
Normal
0.2
343
Tumor
0.2
313
Tumor
0.2
468
Normal
0.2
268
Normal
0.2
498
Normal
0.2
863
Tumor
0.2
258
Normal
0.2
617
Tumor
0.2
824
Normal
0.2
113
Tumor
0.2
685
Tumor
0.2
636
Normal
0.2
745
Tumor
0.2
472
Normal
0.2
482
Normal
0.2
515
Tumor
0.2
672
Normal
0.2
915
Tumor
0.1
141
Tumor
0.1
451
Tumor
0.1
852
Normal
0.1
211
Tumor
0.1
913
Tumor
0.1
616
Normal
0.1
958
Normal
0.1
557
Tumor
0.1
528
Normal
0.1
716
Normal
0.1
327
Tumor
0.1
364
Normal
0.1
721
Tumor
0.1
464
Normal
0.1
491
Tumor
0.1
147
Tumor
0.1
192
Normal
0.1
714
Normal
0.1
957
Tumor
0.1
367
Tumor
0.1
135
Tumor
0.1
558
Normal
0.1
328
Normal
0.1
427
Tumor
0.1
572
Normal
0.1
976
Normal
0.1
563
Tumor
0.1
756
Normal
0.1
217
Tumor
0.1
537
Tumor
0.1
883
Tumor
0.1
393
Tumor
0.1
492
Normal
0.1
462
Normal
0.1
227
Tumor
0.1
524
Normal
0.1
964
Normal
0.1
922
Normal
0.1
696
Normal
0.1
911
Tumor
0.1
412
Normal
0.1
357
Tumor
0.1
433
Tumor
0.1
978
Normal
0.1
1042
Normal
0.1
984
Normal
0.1
944
Normal
0.1
1032
Normal
0.1
867
Tumor
0.0
742
Normal
0.0
882
Normal
0.0
213
Tumor
0.0
884
Normal
0.0
535
Tumor
0.0
664
Normal
0.0
723
Tumor
0.0
456
Normal
0.0
376
Normal
0.0
481
Tumor
0.0
982
Normal
0.0
484
Normal
0.0
195
Tumor
0.0
618
Normal
0.0
662
Normal
0.0
127
Tumor
0.0
126
Normal
0.0
955
Tumor
0.0
1043
Tumor
0.0
538
Normal
0.0
477
Tumor
0.0
1016
Normal
0.0
416
Normal
0.0
362
Normal
0.0
564
Normal
0.0
864
Normal
0.0
916
Normal
0.0
386
Normal
0.0
284
Normal
0.0
383
Tumor
0.0
628
Normal
0.0
536
Normal
0.0
686
Normal
0.0
724
Normal
0.0
396
Normal
0.0
187
Tumor
0.0
465
Tumor
0.0
954
Normal
0.0
426
Normal
0.0
648
Normal
0.0
1015
Tumor
0.0
873
Tumor
0.0
516
Normal
0.0
741
Tumor
0.0
474
Normal
0.0
392
Normal
0.0
298
Normal
0.0
866
Normal
0.0
938
Normal
0.0
912
Normal
0.0
573
Tumor
0.0
574
Normal
0.0
366
Normal
0.0
868
Normal
0.0
186
Normal
0.0
368
Normal
0.0
713
Tumor
0.0
635
Tumor
0.0
968
Normal
0.0
352
Normal
0.0
487
Tumor
0.0
526
Normal
0.0
224
Normal
0.0
874
Normal
0.0
926
Normal
0.0
514
Normal
0.0
615
Tumor
0.0
388
Normal
0.0
488
Normal
0.0
188
Normal
0.0
422
Normal
0.0
444
Normal
0.0
1014
Normal
0.0
494
Normal
0.0
1046
Normal
-0.1
924
Normal
-0.1
148
Normal
-0.1
424
Normal
-0.1
342
Normal
-0.1
518
Normal
-0.1
952
Normal
-0.1
387
Tumor
-0.1
816
Normal
-0.1
414
Normal
-0.1
861
Tumor
-0.1
191
Tumor
-0.1
142
Normal
-0.1
423
Tumor
-0.1
428
Normal
-0.1
228
Normal
-0.1
666
Normal
-0.1
918
Normal
-0.1
223
Tumor
-0.1
114
Normal
-0.1
878
Normal
-0.1
356
Normal
-0.1
124
Normal
-0.1
914
Normal
-0.1
956
Normal
-0.1
286
Normal
-0.1
744
Normal
-0.1
1022
Normal
-0.1
966
Normal
-0.1
1045
Tumor
-0.1
778
Normal
-0.1
1026
Normal
-0.1
172
Normal
-0.1
162
Normal
-0.1
755
Tumor
-0.1
698
Normal
-0.1
443
Tumor
-0.1
722
Normal
-0.1
354
Normal
-0.1
448
Normal
-0.1
332
Normal
-0.2
394
Normal
-0.2
436
Normal
-0.2
728
Normal
-0.2
627
Tumor
-0.2
132
Normal
-0.2
568
Normal
-0.2
222
Normal
-0.2
1044
Normal
-0.2
1028
Normal
-0.2
452
Normal
-0.2
137
Tumor
-0.2
862
Normal
-0.2
446
Normal
-0.2
353
Tumor
-0.2
212
Normal
-0.2
341
Tumor
-0.2
312
Normal
-0.2
344
Normal
-0.2
185
Tumor
-0.2
981
Tumor
-0.2
738
Normal
-0.2
314
Normal
-0.2
138
Normal
-0.2
278
Normal
-0.2
421
Tumor
-0.2
111
Normal
-0.2
145
Tumor
-0.2
1041
Tumor
-0.2
697
Tumor
-0.2
527
Tumor
-0.2
136
Normal
-0.3
358
Normal
-0.3
128
Normal
-0.3
432
Normal
-0.3
146
Normal
-0.3
642
Normal
-0.3
257
Tumor
-0.3
214
Normal
-0.3
395
Tumor
-0.3
196
Normal
-0.3
218
Normal
-0.3
434
Normal
-0.4
925
Tumor
-0.4
1027
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
