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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UQCRC1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
159.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
456.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
390.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
373.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
368.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
364.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
363.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
362.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
352.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
338.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
337.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
320.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
320.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
320.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
318.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
317.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
302.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
297.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
294.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
294.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
289.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
289.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
286.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
285.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
278.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
273.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
269.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
264.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
263.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
261.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
255.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
254.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
251.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
249.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
249.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
247.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
246.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
237.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
236.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
236.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
236.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
234.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
232.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
231.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
231.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
231.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
231.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
226.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
224.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
224.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
224.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
223.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
223.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
222.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
221.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
221.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
220.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
219.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
217.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
216.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
215.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
215.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
215.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
214.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
213.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
212.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
212.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
211.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
210.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
210.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
208.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
207.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
207.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
207.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
207.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
206.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
206.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
205.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
204.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
203.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
203.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
203.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
203.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
202.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
201.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
201.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
199.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
199.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
199.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
198.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
197.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
196.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
196.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
195.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
194.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
194.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
192.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
190.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
189.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
189.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
188.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
187.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
187.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
187.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
186.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
186.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
185.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
185.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
184.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
184.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
184.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
183.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
182.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
181.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
181.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
181.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
181.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
180.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
179.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
178.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
178.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
178.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
177.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
175.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
175.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
174.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
174.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
174.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
173.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
173.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
173.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
172.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
171.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
170.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
169.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
168.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
167.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
167.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
167.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
165.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
165.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
165.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
164.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
164.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
164.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
164.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
164.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
163.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
162.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
161.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
161.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
160.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
159.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
159.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
159.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
158.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
158.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
158.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
157.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
156.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
156.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
155.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
155.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
154.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
154.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
154.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
154.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
154.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
154.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
154.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
153.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
153.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
152.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
152.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
152.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
152.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
151.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
150.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
150.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
150.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
149.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
149.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
149.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
149.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
148.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
148.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
147.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
147.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
146.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
146.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
145.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
145.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
144.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
144.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
144.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
143.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
143.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
143.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
143.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
142.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
142.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
142.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
142.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
141.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
141.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
140.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
140.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
140.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
139.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
139.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
138.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
138.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
138.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
138.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
137.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
137.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
137.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
137.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
136.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
136.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
136.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
136.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
136.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
135.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
135.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
135.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
135.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
135.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
134.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
134.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
133.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
133.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
132.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
131.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
131.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
130.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
129.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
129.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
128.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
128.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
128.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
128.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
128.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
127.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
127.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
127.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
126.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
126.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
125.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
124.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
123.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
123.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
123.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
122.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
122.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
122.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
121.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
120.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
120.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
119.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
118.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
118.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
118.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
118.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
118.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
117.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
117.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
116.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
115.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
115.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
115.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
114.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
113.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
112.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
112.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
112.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
112.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
111.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
111.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
111.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
111.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
111.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
111.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
111.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
109.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
109.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
109.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
109.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
108.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
108.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
107.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
107.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
106.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
106.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
106.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
105.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
104.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
103.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
103.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
102.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
102.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
102.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
102.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
102.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
101.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
100.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
98.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
98.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
98.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
98.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
97.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
96.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
95.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
95.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
94.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
93.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
92.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
92.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
92.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
91.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
91.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
90.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
90.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
89.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
83.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
81.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
80.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
79.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
78.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
77.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
77.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
75.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
74.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
74.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
73.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
73.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
72.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
72.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
71.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
70.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
70.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
69.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
69.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
68.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
65.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
65.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
64.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
64.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
58.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
52.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
50.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
46.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
45.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
44.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
41.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
35.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
34.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
26.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
25.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
19.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
19.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
18.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UQCRC1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.4
Number of samples
231
Samples
Sample
Description
TPM
DO50829
0 years, male, NA, stage:3, alive, 570 days
506.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
399.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
346.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
253.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
247.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
235.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
229.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
226.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
225.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
211.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
210.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
208.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
207.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
201.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
195.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
194.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
187.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
185.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
184.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
182.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
181.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
181.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
179.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
178.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
175.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
175.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
175.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
174.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
173.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
173.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
172.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
170.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
169.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
167.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
164.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
163.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
162.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
162.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
162.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
161.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
160.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
160.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
157.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
156.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
155.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
154.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
153.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
153.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
152.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
152.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
150.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
150.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
149.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
149.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
148.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
147.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
146.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
145.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
143.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
142.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
141.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
141.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
140.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
140.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
139.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
139.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
139.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
139.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
136.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
135.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
135.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
135.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
134.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
134.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
133.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
133.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
133.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
132.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
130.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
130.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
129.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
129.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
129.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
128.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
128.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
128.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
127.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
127.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
126.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
126.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
126.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
125.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
124.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
124.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
124.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
123.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
123.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
123.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
122.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
122.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
121.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
120.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
119.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
118.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
118.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
118.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
118.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
117.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
117.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
116.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
115.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
115.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
114.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
112.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
112.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
112.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
111.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
111.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
110.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
110.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
109.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
108.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
107.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
106.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
106.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
106.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
106.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
106.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
106.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
105.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
105.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
105.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
104.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
104.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
102.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
102.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
101.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
101.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
99.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
99.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
99.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
99.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
98.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
98.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
97.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
97.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
97.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
96.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
96.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
96.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
95.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
95.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
94.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
94.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
94.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
94.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
94.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
93.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
92.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
92.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
91.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
91.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
90.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
90.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
90.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
89.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
89.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
89.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
88.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
87.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
87.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
84.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
84.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
84.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
83.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
83.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
83.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
81.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
81.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
81.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
80.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
80.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
80.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
79.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
78.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
78.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
78.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
77.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
77.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
77.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
76.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
76.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
76.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
76.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
76.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
76.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
75.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
75.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
73.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
71.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
71.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
70.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
70.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
69.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
68.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
68.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
67.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
67.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
67.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
66.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
64.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
64.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
63.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
63.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
63.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
61.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
61.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
60.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
60.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
60.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
59.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
59.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
58.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
57.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
56.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
54.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
54.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
52.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
52.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
29.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
1.0
231
Tumor
0.7
227
Tumor
0.7
571
Tumor
0.6
423
Tumor
0.6
745
Tumor
0.6
915
Tumor
0.5
867
Tumor
0.5
487
Tumor
0.4
411
Tumor
0.4
636
Normal
0.4
172
Normal
0.4
1041
Tumor
0.4
452
Normal
0.4
911
Tumor
0.4
145
Tumor
0.4
491
Tumor
0.4
713
Tumor
0.4
171
Tumor
0.4
1043
Tumor
0.4
448
Normal
0.4
128
Normal
0.4
698
Normal
0.3
394
Normal
0.3
162
Normal
0.3
388
Normal
0.3
327
Tumor
0.3
981
Tumor
0.3
342
Normal
0.3
557
Tumor
0.3
451
Tumor
0.3
1045
Tumor
0.3
466
Normal
0.3
222
Normal
0.3
436
Normal
0.3
196
Normal
0.3
435
Tumor
0.3
344
Normal
0.3
746
Normal
0.3
564
Normal
0.3
462
Normal
0.3
824
Normal
0.3
376
Normal
0.3
922
Normal
0.3
862
Normal
0.2
358
Normal
0.2
914
Normal
0.2
356
Normal
0.2
278
Normal
0.2
858
Normal
0.2
392
Normal
0.2
648
Normal
0.2
314
Normal
0.2
982
Normal
0.2
912
Normal
0.2
328
Normal
0.2
114
Normal
0.2
742
Normal
0.2
214
Normal
0.2
1014
Normal
0.2
468
Normal
0.2
138
Normal
0.2
864
Normal
0.2
868
Normal
0.2
642
Normal
0.2
722
Normal
0.2
332
Normal
0.2
148
Normal
0.2
132
Normal
0.2
426
Normal
0.2
878
Normal
0.2
465
Tumor
0.2
882
Normal
0.2
714
Normal
0.2
186
Normal
0.2
111
Normal
0.2
938
Normal
0.2
416
Normal
0.2
446
Normal
0.2
924
Normal
0.2
414
Normal
0.2
488
Normal
0.2
728
Normal
0.2
464
Normal
0.2
1032
Normal
0.2
258
Normal
0.2
568
Normal
0.2
635
Tumor
0.2
546
Normal
0.2
818
Normal
0.2
534
Normal
0.2
955
Tumor
0.2
298
Normal
0.2
944
Normal
0.2
484
Normal
0.2
228
Normal
0.2
368
Normal
0.2
954
Normal
0.2
738
Normal
0.2
686
Normal
0.2
755
Tumor
0.2
786
Normal
0.2
396
Normal
0.2
1044
Normal
0.2
424
Normal
0.2
1026
Normal
0.2
1046
Normal
0.2
482
Normal
0.2
428
Normal
0.2
554
Normal
0.2
618
Normal
0.1
615
Tumor
0.1
518
Normal
0.1
112
Tumor
0.1
232
Normal
0.1
1013
Tumor
0.1
925
Tumor
0.1
723
Tumor
0.1
526
Normal
0.1
616
Normal
0.1
984
Normal
0.1
161
Tumor
0.1
366
Normal
0.1
874
Normal
0.1
422
Normal
0.1
286
Normal
0.1
218
Normal
0.1
127
Tumor
0.1
695
Tumor
0.1
354
Normal
0.1
124
Normal
0.1
1016
Normal
0.1
664
Normal
0.1
341
Tumor
0.1
756
Normal
0.1
528
Normal
0.1
964
Normal
0.1
432
Normal
0.1
472
Normal
0.1
696
Normal
0.1
136
Normal
0.1
572
Normal
0.1
195
Tumor
0.1
816
Normal
0.1
666
Normal
0.1
1028
Normal
0.1
267
Tumor
0.1
1022
Normal
0.1
721
Tumor
0.1
978
Normal
0.1
142
Normal
0.1
393
Tumor
0.1
1042
Normal
0.1
364
Normal
0.1
926
Normal
0.1
113
Tumor
0.1
866
Normal
0.1
361
Tumor
0.1
976
Normal
0.1
744
Normal
0.1
537
Tumor
0.1
574
Normal
0.1
272
Normal
0.1
716
Normal
0.1
628
Normal
0.1
481
Tumor
0.0
778
Normal
0.0
558
Normal
0.0
968
Normal
0.0
474
Normal
0.0
262
Normal
0.0
494
Normal
0.0
538
Normal
0.0
514
Normal
0.0
456
Normal
0.0
662
Normal
0.0
873
Tumor
0.0
685
Tumor
0.0
126
Normal
0.0
918
Normal
0.0
188
Normal
0.0
284
Normal
0.0
852
Normal
0.0
352
Normal
0.0
386
Normal
0.0
224
Normal
0.0
146
Normal
0.0
952
Normal
0.0
516
Normal
0.0
573
Tumor
0.0
268
Normal
0.0
312
Normal
0.0
212
Normal
0.0
483
Tumor
0.0
956
Normal
0.0
524
Normal
0.0
513
Tumor
0.0
916
Normal
0.0
477
Tumor
0.0
966
Normal
0.0
1025
Tumor
0.0
223
Tumor
-0.1
525
Tumor
-0.1
741
Tumor
-0.1
958
Normal
-0.1
672
Normal
-0.1
434
Normal
-0.1
884
Normal
-0.1
937
Tumor
-0.1
433
Tumor
-0.1
431
Tumor
-0.1
313
Tumor
-0.1
384
Normal
-0.1
365
Tumor
-0.1
257
Tumor
-0.1
191
Tumor
-0.1
353
Tumor
-0.1
123
Tumor
-0.1
663
Tumor
-0.1
187
Tumor
-0.1
957
Tumor
-0.1
913
Tumor
-0.1
387
Tumor
-0.1
923
Tumor
-0.1
217
Tumor
-0.1
135
Tumor
-0.1
478
Normal
-0.2
185
Tumor
-0.2
1015
Tumor
-0.2
861
Tumor
-0.2
492
Normal
-0.2
498
Normal
-0.2
412
Normal
-0.2
953
Tumor
-0.2
427
Tumor
-0.2
221
Tumor
-0.2
963
Tumor
-0.2
473
Tumor
-0.2
444
Normal
-0.2
536
Normal
-0.2
261
Tumor
-0.2
563
Tumor
-0.2
141
Tumor
-0.2
415
Tumor
-0.2
727
Tumor
-0.2
857
Tumor
-0.2
192
Normal
-0.2
461
Tumor
-0.2
665
Tumor
-0.2
777
Tumor
-0.2
697
Tumor
-0.2
785
Tumor
-0.2
641
Tumor
-0.2
395
Tumor
-0.3
147
Tumor
-0.3
357
Tumor
-0.3
1027
Tumor
-0.3
553
Tumor
-0.3
617
Tumor
-0.3
363
Tumor
-0.3
213
Tumor
-0.3
863
Tumor
-0.3
362
Normal
-0.3
517
Tumor
-0.4
813
Tumor
-0.4
567
Tumor
-0.4
413
Tumor
-0.4
977
Tumor
-0.4
743
Tumor
-0.4
497
Tumor
-0.4
355
Tumor
-0.4
137
Tumor
-0.4
383
Tumor
-0.4
647
Tumor
-0.4
715
Tumor
-0.4
277
Tumor
-0.4
271
Tumor
-0.4
391
Tumor
-0.4
125
Tumor
-0.4
467
Tumor
-0.4
1031
Tumor
-0.4
443
Tumor
-0.4
883
Tumor
-0.4
851
Tumor
-0.4
814
Normal
-0.4
447
Tumor
-0.5
865
Tumor
-0.5
493
Tumor
-0.5
515
Tumor
-0.5
367
Tumor
-0.5
445
Tumor
-0.5
533
Tumor
-0.5
881
Tumor
-0.5
421
Tumor
-0.5
343
Tumor
-0.5
523
Tumor
-0.5
1021
Tumor
-0.6
975
Tumor
-0.6
471
Tumor
-0.6
877
Tumor
-0.6
965
Tumor
-0.6
331
Tumor
-0.6
297
Tumor
-0.6
921
Tumor
-0.6
943
Tumor
-0.6
463
Tumor
-0.6
375
Tumor
-0.6
823
Tumor
-0.6
967
Tumor
-0.7
351
Tumor
-0.7
425
Tumor
-0.7
535
Tumor
-0.7
983
Tumor
-0.7
815
Tumor
-0.7
917
Tumor
-0.8
671
Tumor
-0.8
817
Tumor
-0.8
455
Tumor
-0.8
385
Tumor
-0.8
211
Tumor
-0.8
527
Tumor
-0.8
737
Tumor
-0.8
131
Tumor
-0.9
951
Tumor
-0.9
285
Tumor
-0.9
661
Tumor
-1.0
724
Normal
-1.0
311
Tumor
-1.0
545
Tumor
-1.1
283
Tumor
-1.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.