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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL32 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1075.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8624.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8363.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
8036.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5636.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4853.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4452.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4358.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
4205.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3996.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3745.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3540.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3518.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
3361.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3343.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3255.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3249.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3204.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3164.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3103.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3034.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2820.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2776.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2734.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
2633.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2626.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2587.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2582.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2577.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2554.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2499.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2493.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2482.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2428.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2368.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2354.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2346.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2324.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2313.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2302.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2254.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2247.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2199.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2178.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2157.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
2155.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2137.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2106.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2096.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2072.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2044.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2008.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1995.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1980.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1977.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1963.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1955.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1931.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1919.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1897.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1894.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1808.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1801.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1784.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1777.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1746.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1740.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1740.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1716.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1712.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1700.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1678.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1676.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1674.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1622.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1613.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1582.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1575.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1562.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1556.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1486.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1484.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1467.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1443.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1440.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1432.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1411.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1386.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1344.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1337.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1318.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1315.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1302.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1296.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1286.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1285.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1272.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1260.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1235.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1233.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1228.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1220.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1215.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1213.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1207.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1193.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1183.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1173.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1171.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1155.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1150.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1150.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1138.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1108.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1100.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1095.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1087.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1063.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1062.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1060.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1053.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1043.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1038.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1033.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1031.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1017.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1017.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1011.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
990.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
988.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
988.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
985.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
982.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
981.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
975.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
971.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
970.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
969.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
960.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
959.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
956.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
949.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
944.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
940.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
927.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
926.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
924.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
924.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
924.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
920.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
919.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
906.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
901.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
895.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
891.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
885.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
879.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
873.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
867.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
863.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
856.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
856.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
855.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
855.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
854.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
843.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
842.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
813.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
812.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
798.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
798.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
794.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
779.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
778.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
768.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
761.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
756.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
753.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
752.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
741.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
738.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
717.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
715.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
712.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
711.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
710.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
704.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
702.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
700.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
693.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
689.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
688.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
685.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
681.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
674.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
671.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
656.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
650.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
644.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
643.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
640.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
638.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
636.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
635.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
632.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
630.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
627.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
626.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
623.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
622.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
618.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
614.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
611.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
610.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
609.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
605.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
604.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
587.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
585.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
584.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
569.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
561.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
557.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
557.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
554.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
554.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
550.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
549.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
549.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
546.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
542.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
541.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
530.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
528.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
527.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
525.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
525.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
520.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
513.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
501.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
492.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
490.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
482.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
481.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
478.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
477.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
476.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
473.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
472.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
471.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
471.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
469.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
468.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
468.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
467.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
461.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
449.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
448.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
446.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
445.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
444.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
434.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
434.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
432.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
427.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
426.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
425.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
420.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
415.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
414.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
414.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
412.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
411.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
402.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
400.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
395.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
390.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
389.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
388.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
386.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
385.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
384.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
382.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
379.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
371.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
371.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
367.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
356.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
350.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
350.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
343.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
343.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
339.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
336.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
332.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
327.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
325.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
320.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
314.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
310.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
304.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
304.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
290.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
284.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
276.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
276.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
271.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
268.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
264.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
260.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
251.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
250.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
248.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
244.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
243.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
242.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
242.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
239.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
239.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
227.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
227.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
227.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
224.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
222.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
220.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
216.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
214.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
210.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
209.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
198.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
191.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
191.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
191.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
188.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
184.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
183.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
183.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
181.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
171.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
160.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
155.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
149.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
146.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
136.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
135.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
133.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
121.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
109.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
102.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
95.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
93.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
88.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
79.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
77.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
73.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
63.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
61.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
55.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
53.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
49.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
49.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
43.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL32 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
620.1
Number of samples
231
Samples
Sample
Description
TPM
DO50803
0 years, female, NA, stage:1, alive, 540 days
2749.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
2558.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2337.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2250.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2226.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
2147.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
2070.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
1952.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1940.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
1929.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
1835.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
1708.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1697.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1567.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1543.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
1473.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1460.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1458.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
1442.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1424.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
1352.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1334.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
1324.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
1279.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1261.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
1237.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
1236.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1233.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
1223.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1220.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1209.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1193.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
1188.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
1183.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1167.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
1143.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1133.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
1129.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1119.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
1090.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
1076.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
1039.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
1024.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
986.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
968.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
967.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
918.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
918.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
907.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
900.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
878.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
877.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
874.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
834.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
831.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
824.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
806.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
803.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
800.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
800.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
795.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
790.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
788.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
785.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
783.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
773.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
766.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
764.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
753.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
751.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
749.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
747.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
741.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
740.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
731.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
730.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
721.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
717.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
702.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
702.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
702.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
669.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
667.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
666.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
655.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
652.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
640.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
635.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
614.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
612.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
611.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
603.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
578.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
567.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
566.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
566.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
557.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
555.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
553.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
546.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
544.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
539.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
536.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
531.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
519.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
514.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
508.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
508.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
506.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
505.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
501.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
497.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
496.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
496.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
476.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
472.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
469.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
469.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
464.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
462.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
461.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
460.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
447.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
439.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
431.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
427.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
424.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
422.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
421.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
416.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
416.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
412.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
405.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
389.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
388.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
382.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
379.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
369.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
368.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
368.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
365.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
348.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
336.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
326.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
326.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
326.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
325.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
322.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
320.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
320.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
317.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
317.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
315.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
310.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
309.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
303.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
302.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
298.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
296.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
288.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
287.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
286.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
285.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
283.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
280.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
277.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
274.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
272.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
270.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
258.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
257.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
255.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
253.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
252.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
251.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
244.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
243.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
221.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
220.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
215.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
212.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
209.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
208.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
206.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
205.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
205.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
204.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
194.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
186.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
184.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
179.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
174.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
169.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
166.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
165.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
151.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
150.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
148.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
147.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
132.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
130.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
122.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
120.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
118.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
117.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
116.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
114.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
108.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
103.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
103.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
101.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
99.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
91.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
90.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
89.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
86.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
85.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
83.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
81.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
79.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
78.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
54.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
50.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
48.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
41.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
36.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
36.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
35.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
23.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
13.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
5.2
857
Tumor
4.3
191
Tumor
4.1
267
Tumor
3.8
741
Tumor
3.8
1041
Tumor
3.8
145
Tumor
3.6
415
Tumor
3.6
525
Tumor
3.5
1045
Tumor
3.3
913
Tumor
2.9
911
Tumor
2.3
375
Tumor
2.2
427
Tumor
2.1
672
Normal
1.9
925
Tumor
1.8
873
Tumor
1.6
617
Tumor
1.5
661
Tumor
1.4
662
Normal
1.4
223
Tumor
1.3
666
Normal
1.3
443
Tumor
1.2
664
Normal
1.1
477
Tumor
1.0
297
Tumor
1.0
663
Tumor
0.9
648
Normal
0.9
1013
Tumor
0.9
471
Tumor
0.9
535
Tumor
0.8
493
Tumor
0.8
665
Tumor
0.7
671
Tumor
0.6
383
Tumor
0.5
755
Tumor
0.4
268
Normal
0.4
187
Tumor
0.3
528
Normal
0.3
563
Tumor
0.2
445
Tumor
0.2
823
Tumor
0.1
534
Normal
0.1
351
Tumor
0.1
526
Normal
0.1
361
Tumor
0.0
146
Normal
-0.1
573
Tumor
-0.1
912
Normal
-0.1
135
Tumor
-0.1
1021
Tumor
-0.1
975
Tumor
-0.2
858
Normal
-0.2
192
Normal
-0.2
527
Tumor
-0.2
867
Tumor
-0.2
546
Normal
-0.2
851
Tumor
-0.2
721
Tumor
-0.3
195
Tumor
-0.3
538
Normal
-0.3
951
Tumor
-0.3
937
Tumor
-0.4
554
Normal
-0.4
385
Tumor
-0.4
926
Normal
-0.4
425
Tumor
-0.4
647
Tumor
-0.5
411
Tumor
-0.5
483
Tumor
-0.6
545
Tumor
-0.6
395
Tumor
-0.6
451
Tumor
-0.6
376
Normal
-0.6
537
Tumor
-0.6
553
Tumor
-0.6
231
Tumor
-0.6
557
Tumor
-0.7
467
Tumor
-0.7
213
Tumor
-0.8
478
Normal
-0.8
365
Tumor
-0.8
455
Tumor
-0.8
368
Normal
-0.8
724
Normal
-0.8
685
Tumor
-0.8
1015
Tumor
-0.8
141
Tumor
-0.9
881
Tumor
-0.9
214
Normal
-0.9
387
Tumor
-0.9
1031
Tumor
-0.9
571
Tumor
-0.9
513
Tumor
-1.0
465
Tumor
-1.0
217
Tumor
-1.0
883
Tumor
-1.0
221
Tumor
-1.0
884
Normal
-1.0
523
Tumor
-1.0
433
Tumor
-1.1
327
Tumor
-1.1
123
Tumor
-1.1
138
Normal
-1.1
137
Tumor
-1.1
277
Tumor
-1.1
311
Tumor
-1.1
1025
Tumor
-1.1
142
Normal
-1.2
474
Normal
-1.2
1014
Normal
-1.2
817
Tumor
-1.2
882
Normal
-1.2
353
Tumor
-1.2
861
Tumor
-1.2
956
Normal
-1.2
428
Normal
-1.2
218
Normal
-1.2
196
Normal
-1.3
472
Normal
-1.3
262
Normal
-1.3
343
Tumor
-1.3
366
Normal
-1.3
738
Normal
-1.3
852
Normal
-1.3
943
Tumor
-1.3
312
Normal
-1.3
413
Tumor
-1.3
416
Normal
-1.3
641
Tumor
-1.3
132
Normal
-1.4
955
Tumor
-1.4
362
Normal
-1.4
161
Tumor
-1.4
461
Tumor
-1.4
423
Tumor
-1.4
952
Normal
-1.4
136
Normal
-1.4
431
Tumor
-1.4
367
Tumor
-1.4
1046
Normal
-1.4
421
Tumor
-1.4
877
Tumor
-1.4
113
Tumor
-1.4
271
Tumor
-1.5
878
Normal
-1.5
874
Normal
-1.5
715
Tumor
-1.5
953
Tumor
-1.5
818
Normal
-1.5
524
Normal
-1.5
481
Tumor
-1.5
938
Normal
-1.5
977
Tumor
-1.5
384
Normal
-1.5
515
Tumor
-1.5
697
Tumor
-1.5
446
Normal
-1.5
482
Normal
-1.6
222
Normal
-1.6
261
Tumor
-1.6
728
Normal
-1.6
355
Tumor
-1.6
434
Normal
-1.6
816
Normal
-1.6
713
Tumor
-1.6
824
Normal
-1.6
494
Normal
-1.6
1043
Tumor
-1.6
916
Normal
-1.6
923
Tumor
-1.6
126
Normal
-1.6
514
Normal
-1.7
984
Normal
-1.7
224
Normal
-1.7
447
Tumor
-1.7
228
Normal
-1.7
516
Normal
-1.7
1044
Normal
-1.7
868
Normal
-1.7
963
Tumor
-1.7
744
Normal
-1.7
567
Tumor
-1.8
492
Normal
-1.8
422
Normal
-1.8
212
Normal
-1.8
978
Normal
-1.8
917
Tumor
-1.8
981
Tumor
-1.8
615
Tumor
-1.8
723
Tumor
-1.8
473
Tumor
-1.8
1028
Normal
-1.8
462
Normal
-1.8
695
Tumor
-1.8
227
Tumor
-1.8
188
Normal
-1.9
915
Tumor
-1.9
257
Tumor
-1.9
954
Normal
-1.9
444
Normal
-1.9
518
Normal
-1.9
737
Tumor
-1.9
921
Tumor
-1.9
232
Normal
-1.9
536
Normal
-1.9
352
Normal
-1.9
258
Normal
-1.9
944
Normal
-1.9
627
Tumor
-2.0
436
Normal
-2.0
918
Normal
-2.0
722
Normal
-2.0
131
Tumor
-2.0
1032
Normal
-2.0
272
Normal
-2.0
983
Tumor
-2.0
286
Normal
-2.0
922
Normal
-2.0
185
Tumor
-2.0
957
Tumor
-2.0
112
Tumor
-2.0
344
Normal
-2.1
815
Tumor
-2.1
284
Normal
-2.1
328
Normal
-2.1
393
Tumor
-2.1
278
Normal
-2.1
412
Normal
-2.1
498
Normal
-2.1
127
Tumor
-2.1
716
Normal
-2.1
356
Normal
-2.1
332
Normal
-2.1
487
Tumor
-2.1
1022
Normal
-2.1
696
Normal
-2.2
1016
Normal
-2.2
331
Tumor
-2.2
364
Normal
-2.2
432
Normal
-2.2
714
Normal
-2.2
976
Normal
-2.2
686
Normal
-2.2
488
Normal
-2.2
924
Normal
-2.2
448
Normal
-2.3
426
Normal
-2.3
354
Normal
-2.3
358
Normal
-2.3
363
Tumor
-2.3
424
Normal
-2.3
171
Tumor
-2.3
982
Normal
-2.3
966
Normal
-2.3
968
Normal
-2.3
727
Tumor
-2.3
342
Normal
-2.4
484
Normal
-2.4
1026
Normal
-2.4
211
Tumor
-2.4
392
Normal
-2.4
357
Tumor
-2.4
517
Tumor
-2.4
965
Tumor
-2.5
491
Tumor
-2.5
148
Normal
-2.5
618
Normal
-2.5
125
Tumor
-2.5
396
Normal
-2.5
298
Normal
-2.5
785
Tumor
-2.5
414
Normal
-2.5
558
Normal
-2.5
814
Normal
-2.5
114
Normal
-2.6
124
Normal
-2.6
497
Tumor
-2.6
314
Normal
-2.6
283
Tumor
-2.6
698
Normal
-2.6
866
Normal
-2.6
862
Normal
-2.6
743
Tumor
-2.6
756
Normal
-2.6
386
Normal
-2.6
111
Normal
-2.6
864
Normal
-2.6
863
Tumor
-2.6
967
Tumor
-2.6
172
Normal
-2.7
285
Tumor
-2.7
162
Normal
-2.7
628
Normal
-2.7
464
Normal
-2.7
313
Tumor
-2.7
964
Normal
-2.8
777
Tumor
-2.8
456
Normal
-2.8
468
Normal
-2.8
466
Normal
-2.8
147
Tumor
-2.8
186
Normal
-2.9
778
Normal
-2.9
341
Tumor
-2.9
463
Tumor
-2.9
435
Tumor
-2.9
388
Normal
-2.9
452
Normal
-2.9
958
Normal
-2.9
786
Normal
-3.0
564
Normal
-3.0
574
Normal
-3.0
128
Normal
-3.0
1027
Tumor
-3.0
616
Normal
-3.1
635
Tumor
-3.1
865
Tumor
-3.1
745
Tumor
-3.1
642
Normal
-3.2
572
Normal
-3.2
568
Normal
-3.3
813
Tumor
-3.3
394
Normal
-3.3
391
Tumor
-3.3
636
Normal
-3.3
742
Normal
-3.5
746
Normal
-3.8
1042
Normal
-4.6
914
Normal
-6.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.