We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFRD1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
21.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
17.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
6.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
5.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
5.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
5.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
5.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
5.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
3.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
3.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
3.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
3.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
2.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
2.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
2.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
2.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
2.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
2.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
2.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
2.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
2.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
2.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
0.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
0.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
0.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
0.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFRD1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
231
Samples
Sample
Description
TPM
DO50817
0 years, male, NA, stage:2, alive, 390 days
74.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
72.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
57.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
55.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
54.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
49.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
48.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
44.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
39.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
39.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
39.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
38.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
38.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
37.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
35.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
32.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
31.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
31.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
30.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
29.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
27.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
27.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
27.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
27.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
26.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
26.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
25.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
25.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
24.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
24.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
24.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
23.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
23.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
23.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
23.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
22.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
21.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
21.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
21.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
21.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
20.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
20.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
20.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
20.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
20.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
19.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
19.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
19.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
19.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
18.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
18.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
18.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
18.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
18.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
16.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
16.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
16.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
16.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
16.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
14.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
14.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
13.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
13.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
12.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
11.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
10.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
7.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
877
Tumor
3.0
343
Tumor
2.6
217
Tumor
2.5
967
Tumor
2.1
391
Tumor
2.0
671
Tumor
1.9
851
Tumor
1.7
125
Tumor
1.7
351
Tumor
1.6
863
Tumor
1.6
328
Normal
1.5
815
Tumor
1.3
697
Tumor
1.2
573
Tumor
1.1
395
Tumor
1.0
517
Tumor
1.0
813
Tumor
1.0
685
Tumor
1.0
713
Tumor
0.9
1015
Tumor
0.8
192
Normal
0.8
113
Tumor
0.8
526
Normal
0.6
285
Tumor
0.5
363
Tumor
0.5
953
Tumor
0.5
375
Tumor
0.5
352
Normal
0.5
536
Normal
0.4
283
Tumor
0.4
722
Normal
0.4
523
Tumor
0.4
535
Tumor
0.4
818
Normal
0.3
937
Tumor
0.3
938
Normal
0.3
223
Tumor
0.3
537
Tumor
0.2
367
Tumor
0.2
224
Normal
0.2
724
Normal
0.2
778
Normal
0.2
665
Tumor
0.2
865
Tumor
0.1
617
Tumor
0.1
228
Normal
0.1
558
Normal
0.1
686
Normal
0.0
1026
Normal
0.0
546
Normal
0.0
557
Tumor
0.0
956
Normal
0.0
663
Tumor
0.0
467
Tumor
0.0
1042
Normal
0.0
923
Tumor
0.0
331
Tumor
0.0
814
Normal
0.0
527
Tumor
0.0
327
Tumor
-0.1
286
Normal
-0.1
142
Normal
-0.1
981
Tumor
-0.1
1022
Normal
-0.1
491
Tumor
-0.1
1044
Normal
-0.1
497
Tumor
-0.1
227
Tumor
-0.1
396
Normal
-0.1
195
Tumor
-0.1
354
Normal
-0.2
745
Tumor
-0.2
723
Tumor
-0.2
884
Normal
-0.2
816
Normal
-0.2
191
Tumor
-0.2
924
Normal
-0.2
364
Normal
-0.2
1046
Normal
-0.2
968
Normal
-0.2
472
Normal
-0.2
344
Normal
-0.2
744
Normal
-0.3
524
Normal
-0.3
647
Tumor
-0.3
368
Normal
-0.3
954
Normal
-0.3
873
Tumor
-0.3
474
Normal
-0.3
1045
Tumor
-0.3
534
Normal
-0.3
487
Tumor
-0.3
952
Normal
-0.3
746
Normal
-0.3
951
Tumor
-0.3
494
Normal
-0.3
964
Normal
-0.3
525
Tumor
-0.3
518
Normal
-0.4
672
Normal
-0.4
857
Tumor
-0.4
447
Tumor
-0.4
984
Normal
-0.4
425
Tumor
-0.4
817
Tumor
-0.4
715
Tumor
-0.4
785
Tumor
-0.4
944
Normal
-0.4
388
Normal
-0.4
571
Tumor
-0.4
868
Normal
-0.4
915
Tumor
-0.4
616
Normal
-0.4
1028
Normal
-0.4
516
Normal
-0.4
648
Normal
-0.4
824
Normal
-0.4
353
Tumor
-0.4
514
Normal
-0.4
528
Normal
-0.4
488
Normal
-0.5
393
Tumor
-0.5
448
Normal
-0.5
1016
Normal
-0.5
696
Normal
-0.5
917
Tumor
-0.5
926
Normal
-0.5
384
Normal
-0.5
387
Tumor
-0.5
498
Normal
-0.5
342
Normal
-0.5
743
Tumor
-0.5
858
Normal
-0.5
463
Tumor
-0.5
553
Tumor
-0.5
538
Normal
-0.5
1021
Tumor
-0.5
545
Tumor
-0.6
721
Tumor
-0.6
135
Tumor
-0.6
982
Normal
-0.6
741
Tumor
-0.6
866
Normal
-0.6
392
Normal
-0.6
714
Normal
-0.6
386
Normal
-0.6
567
Tumor
-0.6
394
Normal
-0.6
976
Normal
-0.6
666
Normal
-0.6
284
Normal
-0.6
918
Normal
-0.6
922
Normal
-0.6
618
Normal
-0.6
756
Normal
-0.6
574
Normal
-0.6
852
Normal
-0.6
983
Tumor
-0.7
823
Tumor
-0.7
1041
Tumor
-0.7
492
Normal
-0.7
124
Normal
-0.7
777
Tumor
-0.7
695
Tumor
-0.7
728
Normal
-0.7
257
Tumor
-0.7
513
Tumor
-0.7
385
Tumor
-0.7
297
Tumor
-0.7
727
Tumor
-0.7
861
Tumor
-0.7
916
Normal
-0.7
358
Normal
-0.7
878
Normal
-0.7
356
Normal
-0.7
313
Tumor
-0.7
943
Tumor
-0.7
554
Normal
-0.8
1014
Normal
-0.8
452
Normal
-0.8
958
Normal
-0.8
882
Normal
-0.8
212
Normal
-0.8
742
Normal
-0.8
912
Normal
-0.8
314
Normal
-0.8
568
Normal
-0.8
145
Tumor
-0.8
341
Tumor
-0.8
716
Normal
-0.8
874
Normal
-0.8
311
Tumor
-0.8
196
Normal
-0.8
218
Normal
-0.8
963
Tumor
-0.8
642
Normal
-0.8
862
Normal
-0.9
738
Normal
-0.9
1027
Tumor
-0.9
213
Tumor
-0.9
864
Normal
-0.9
1025
Tumor
-0.9
786
Normal
-0.9
312
Normal
-0.9
564
Normal
-0.9
456
Normal
-0.9
755
Tumor
-0.9
361
Tumor
-0.9
132
Normal
-0.9
376
Normal
-1.0
533
Tumor
-1.0
661
Tumor
-1.0
737
Tumor
-1.0
1032
Normal
-1.0
332
Normal
-1.0
186
Normal
-1.0
572
Normal
-1.0
416
Normal
-1.0
965
Tumor
-1.0
232
Normal
-1.0
978
Normal
-1.0
412
Normal
-1.0
1043
Tumor
-1.0
468
Normal
-1.0
636
Normal
-1.0
914
Normal
-1.0
563
Tumor
-1.0
414
Normal
-1.1
415
Tumor
-1.1
913
Tumor
-1.1
137
Tumor
-1.1
428
Normal
-1.1
413
Tumor
-1.1
955
Tumor
-1.1
365
Tumor
-1.1
366
Normal
-1.1
464
Normal
-1.1
138
Normal
-1.1
383
Tumor
-1.1
443
Tumor
-1.1
277
Tumor
-1.1
355
Tumor
-1.1
911
Tumor
-1.1
444
Normal
-1.1
411
Tumor
-1.1
925
Tumor
-1.1
126
Normal
-1.1
957
Tumor
-1.1
424
Normal
-1.1
515
Tumor
-1.1
478
Normal
-1.1
131
Tumor
-1.1
146
Normal
-1.2
141
Tumor
-1.2
426
Normal
-1.2
451
Tumor
-1.2
977
Tumor
-1.2
628
Normal
-1.2
481
Tumor
-1.2
615
Tumor
-1.2
975
Tumor
-1.2
422
Normal
-1.3
662
Normal
-1.3
136
Normal
-1.3
477
Tumor
-1.3
431
Tumor
-1.3
262
Normal
-1.3
187
Tumor
-1.3
635
Tumor
-1.3
112
Tumor
-1.3
883
Tumor
-1.3
148
Normal
-1.3
664
Normal
-1.3
966
Normal
-1.3
278
Normal
-1.3
1013
Tumor
-1.3
298
Normal
-1.3
867
Tumor
-1.4
446
Normal
-1.4
921
Tumor
-1.4
214
Normal
-1.4
211
Tumor
-1.4
362
Normal
-1.4
111
Normal
-1.4
482
Normal
-1.4
698
Normal
-1.4
445
Tumor
-1.5
462
Normal
-1.5
432
Normal
-1.5
267
Tumor
-1.5
484
Normal
-1.5
128
Normal
-1.5
114
Normal
-1.5
357
Tumor
-1.5
258
Normal
-1.6
221
Tumor
-1.6
222
Normal
-1.6
261
Tumor
-1.6
1031
Tumor
-1.6
147
Tumor
-1.6
455
Tumor
-1.7
421
Tumor
-1.7
627
Tumor
-1.7
172
Normal
-1.7
161
Tumor
-1.7
268
Normal
-1.8
493
Tumor
-1.8
423
Tumor
-1.8
466
Normal
-1.8
433
Tumor
-1.8
434
Normal
-1.8
162
Normal
-1.9
461
Tumor
-1.9
188
Normal
-2.0
641
Tumor
-2.0
436
Normal
-2.0
471
Tumor
-2.1
483
Tumor
-2.1
435
Tumor
-2.1
185
Tumor
-2.1
272
Normal
-2.2
881
Tumor
-2.2
231
Tumor
-2.3
473
Tumor
-2.3
123
Tumor
-2.4
427
Tumor
-2.5
465
Tumor
-2.5
171
Tumor
-2.7
271
Tumor
-3.0
127
Tumor
-3.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
