HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:37.5 nTPM
GTEx:24.9 nTPM
FANTOM5:74.6 Scaled Tags Per Million
Pig:39.5 nTPM
Mouse:77.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024122Antibody HPA072413
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.5
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
1855 Male, age 76, left hemisphere 43.1
2529 Female, age 94, left hemisphere 32.3
2148 Female, age 91, left hemisphere 30.1
1911 Female, age 85, right hemisphere 29.1
2621 Female, age 67, right hemisphere 26.7
1898 Male, age 80, left hemisphere 26.6
Dentate gyrus
nTPM: 32.5
2010 Male, age 76, both hemispheres 50.1
2528 Male, age 74, both hemispheres 32.5
2531 Female, age 67, both hemispheres 32.4
2246 Female, age 85, both hemispheres 29.8
1927 Female, age 91, both hemispheres 25.8
2530 Female, age 94, left hemisphere 24.5
Entorhinal gyrus
nTPM: 24.9
1787 Male, age 76, left hemisphere 31.3
2117 Female, age 91, right hemisphere 27.2
2686 Male, age 75, right hemisphere 24.9
2764 Male, age 80, right hemisphere 23.6
1938 Female, age 85, left hemisphere 21.9
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 34.6
2045 Male, age 76, both hemispheres 51.6
2082 Female, age 91, right hemisphere 33.7
2749 Male, age 80, left hemisphere 30.6
2527 Male, age 74, both hemispheres 28.7
1873 Female, age 85, both hemispheres 28.3
Hippocampus, CA2
nTPM: 34.5
1892 Male, age 76, both hemispheres 49.0
2249 Male, age 74, both hemispheres 34.7
2113 Female, age 91, right hemisphere 34.1
1940 Female, age 85, left hemisphere 33.0
1963 Male, age 80, left hemisphere 30.2
2437 Female, age 94, left hemisphere 25.7
Hippocampus, CA3
nTPM: 37.5
1867 Male, age 76, both hemispheres 49.7
2436 Male, age 74, both hemispheres 46.7
2137 Male, age 80, left hemisphere 34.3
2861 Female, age 67, both hemispheres 32.0
2620 Female, age 94, left hemisphere 31.4
1891 Female, age 85, both hemispheres 30.7
Parahippocampal cortex
nTPM: 26.8
2018 Male, age 76, both hemispheres 40.4
2250 Female, age 67, right hemisphere 28.0
2622 Female, age 67, right hemisphere 27.7
1990 Female, age 91, right hemisphere 26.1
2692 Male, age 74, both hemispheres 25.8
2693 Female, age 94, both hemispheres 25.4
1850 Male, age 80, both hemispheres 24.8
2245 Female, age 91, both hemispheres 24.4
2532 Female, age 72, left hemisphere 23.9
1933 Female, age 85, both hemispheres 22.0
Perirhinal gyrus
nTPM: 29.6
2521 Female, age 94, right hemisphere 39.3
2848 Male, age 76, right hemisphere 36.8
1847 Female, age 91, left hemisphere 25.0
1841 Female, age 85, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.0
Subiculum
nTPM: 30.7
2042 Male, age 76, both hemispheres 40.6
2729 Female, age 91, right hemisphere 34.6
1901 Male, age 80, both hemispheres 30.8
1977 Female, age 85, both hemispheres 30.3
2619 Male, age 74, both hemispheres 26.0
2438 Female, age 94, left hemisphere 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 94.6
Min nTPM: 12.7
Std nTPM: 7.7
Median nTPM: 23.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 94.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 43.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 38.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 37.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 37.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 37.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 36.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.6
FF:10153-102I9 76 years, female 78.6
FF:10169-103B7 60 years, female 70.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.5
Pig sample Sample description nTPM
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 31.0
Min nTPM: 21.9
Sample A Female 28.8
Sample B Female 22.0
Sample C Male 31.0
Sample D Male 21.9
Dorsal hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 50.2
Min nTPM: 30.3
Sample A Female 50.2
Sample B Female 36.3
Sample C Male 41.0
Sample D Male 30.3
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 26.5
Min nTPM: 24.1
Sample A Female 25.3
Sample B Female 26.5
Sample C Male 26.3
Sample D Male 24.1
Ventral hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 49.2
Min nTPM: 27.9
Sample A Female 49.2
Sample B Female 27.9
Sample C Male 41.3
Sample D Male 39.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 77.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 85.9
Min nTPM: 56.3
Sample A Male 72.8
Sample B Male 85.9
Sample C Female 73.2
Sample D Female 56.3
Hippocampal formation
nTPM: 77.0
Samples: 4

Max nTPM: 85.7
Min nTPM: 71.4
Sample A Male 85.7
Sample B Male 76.4
Sample C Female 74.4
Sample D Female 71.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68861742 Antisense, RP_050224_02_H04, Mouse strain C57BL/6J (56 days, male) 1.3

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