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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM98 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
218.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
194.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
183.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
179.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
165.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
163.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
161.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
154.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
137.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
136.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
132.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
130.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
129.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
121.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
117.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
117.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
116.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
116.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
114.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
112.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
110.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
108.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
99.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
97.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
96.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
95.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
94.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
94.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
92.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
87.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
86.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
86.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
86.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
84.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
83.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
82.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
82.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
81.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
81.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
79.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
75.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
75.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
74.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
74.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
74.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
73.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
72.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
72.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
71.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
70.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
70.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
69.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
68.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
68.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
67.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
67.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
65.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
65.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
65.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
64.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
64.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
64.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
63.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
63.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
62.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
62.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
61.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
61.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
61.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
60.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
59.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
59.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
59.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
58.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
58.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
57.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
54.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
54.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
54.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
54.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
54.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
54.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
53.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
53.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
52.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
52.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
52.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
52.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
51.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
51.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
51.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
50.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
50.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
50.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
50.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
50.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
49.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
49.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
49.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
49.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
49.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
49.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
48.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
48.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
48.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
47.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
47.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
47.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
47.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
47.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
46.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
46.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
46.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
46.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
45.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
45.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
44.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
44.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
43.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
43.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
43.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
42.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
42.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
42.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
41.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
41.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
41.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
41.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
40.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
40.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
40.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
40.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
40.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
40.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
40.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
39.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
39.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
39.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
39.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
38.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
38.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
38.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
38.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
37.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
37.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
37.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
37.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
37.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
37.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
37.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
36.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
36.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
36.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
36.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
36.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
35.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
35.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
35.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
35.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
34.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
34.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
34.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
34.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
33.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
32.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
32.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
32.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
32.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
32.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
32.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
32.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
31.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
31.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
31.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
30.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
30.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
30.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
30.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
30.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
30.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
30.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
30.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
29.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
29.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
29.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
28.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
28.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
28.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
28.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
28.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
27.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
27.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
27.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
27.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
27.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
27.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
26.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
26.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
26.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
25.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
25.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
25.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
24.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
24.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
23.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
23.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
23.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
23.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
22.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
22.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
22.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
22.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
22.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
21.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
21.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
21.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
21.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
21.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
21.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
21.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
20.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
20.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
19.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
19.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
19.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
19.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
19.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
18.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
18.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
17.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
17.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
17.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
16.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
15.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
14.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
13.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
12.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
11.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
10.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
7.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
2.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM98 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
136.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
102.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
92.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
88.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
85.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
74.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
71.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
70.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
70.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
69.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
67.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
63.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
60.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
59.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
59.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
57.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
56.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
55.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
55.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
54.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
54.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
54.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
50.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
50.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
50.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
50.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
50.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
49.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
48.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
47.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
47.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
47.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
45.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
45.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
44.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
44.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
44.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
43.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
43.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
43.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
42.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
42.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
42.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
41.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
40.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
40.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
40.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
39.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
39.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
39.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
38.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
38.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
38.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
38.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
38.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
37.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
37.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
37.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
36.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
36.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
36.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
35.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
34.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
34.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
33.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
33.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
33.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
32.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
32.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
31.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
31.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
31.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
31.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
31.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
30.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
30.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
30.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
29.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
29.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
29.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
29.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
29.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
28.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
28.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
28.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
28.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
27.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
26.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
26.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
26.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
25.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
24.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
23.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
23.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
23.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
22.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
22.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
22.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
21.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
21.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
21.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
20.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
18.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
17.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
16.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
15.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
15.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
15.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
14.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
12.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
4.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
4.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
1.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
1.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
1.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
1.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
1.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
1.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
1.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.1
943
Tumor
1.1
917
Tumor
0.9
915
Tumor
0.9
741
Tumor
0.9
921
Tumor
0.8
923
Tumor
0.6
571
Tumor
0.6
916
Normal
0.5
737
Tumor
0.5
938
Normal
0.4
567
Tumor
0.4
727
Tumor
0.4
446
Normal
0.4
445
Tumor
0.4
534
Normal
0.4
535
Tumor
0.4
432
Normal
0.4
536
Normal
0.3
433
Tumor
0.3
1043
Tumor
0.3
127
Tumor
0.3
528
Normal
0.3
925
Tumor
0.3
431
Tumor
0.3
1016
Normal
0.3
981
Tumor
0.2
447
Tumor
0.2
558
Normal
0.2
553
Tumor
0.2
557
Tumor
0.2
724
Normal
0.2
572
Normal
0.2
563
Tumor
0.2
918
Normal
0.2
573
Tumor
0.2
435
Tumor
0.2
1045
Tumor
0.2
123
Tumor
0.2
568
Normal
0.2
564
Normal
0.2
982
Normal
0.1
1046
Normal
0.1
697
Tumor
0.1
527
Tumor
0.1
546
Normal
0.1
698
Normal
0.1
956
Normal
0.1
444
Normal
0.1
448
Normal
0.1
574
Normal
0.0
434
Normal
0.0
1044
Normal
0.0
436
Normal
0.0
954
Normal
0.0
984
Normal
0.0
924
Normal
0.0
128
Normal
-0.1
1014
Normal
-0.1
922
Normal
-0.1
944
Normal
-0.1
742
Normal
-0.1
533
Tumor
-0.1
926
Normal
-0.1
111
Normal
-0.2
538
Normal
-0.2
112
Tumor
-0.2
554
Normal
-0.2
443
Tumor
-0.2
952
Normal
-0.2
126
Normal
-0.2
953
Tumor
-0.3
951
Tumor
-0.3
124
Normal
-0.3
545
Tumor
-0.3
114
Normal
-0.3
728
Normal
-0.3
125
Tumor
-0.3
978
Normal
-0.4
738
Normal
-0.4
113
Tumor
-0.4
723
Tumor
-0.4
744
Normal
-0.6
537
Tumor
-0.6
1015
Tumor
-0.7
977
Tumor
-1.3
1013
Tumor
-1.3
955
Tumor
-1.4
983
Tumor
-1.8
937
Tumor
-1.8
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
487
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
368
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
451
Tumor
N/A
331
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
332
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
