HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:5.2 nTPM
HPA Brain:9.7 nTPM
GTEx:5.2 nTPM
FANTOM5:7.6 Scaled Tags Per Million
Pig:5.4 nTPM
Mouse:27.6 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019052Antibody HPA019364Antibody HPA019365
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.7
Sample id Sample description nTPM
Hippocampus
nTPM: 7.6
2529 Female, age 94, left hemisphere 8.8
1898 Male, age 80, left hemisphere 8.5
1855 Male, age 76, left hemisphere 7.9
2148 Female, age 91, left hemisphere 7.2
1911 Female, age 85, right hemisphere 7.0
2621 Female, age 67, right hemisphere 6.4
Dentate gyrus
nTPM: 7.1
1927 Female, age 91, both hemispheres 7.9
2246 Female, age 85, both hemispheres 7.2
2528 Male, age 74, both hemispheres 7.0
2530 Female, age 94, left hemisphere 6.9
2010 Male, age 76, both hemispheres 6.8
2531 Female, age 67, both hemispheres 6.7
Entorhinal gyrus
nTPM: 6.8
1938 Female, age 85, left hemisphere 7.3
2117 Female, age 91, right hemisphere 7.3
1787 Male, age 76, left hemisphere 7.2
2764 Male, age 80, right hemisphere 6.4
2613 Female, age 94, left hemisphere 6.2
2686 Male, age 75, right hemisphere 6.2
Hippocampus, CA1
nTPM: 7.6
1873 Female, age 85, both hemispheres 8.2
2082 Female, age 91, right hemisphere 7.9
2749 Male, age 80, left hemisphere 7.9
2045 Male, age 76, both hemispheres 6.9
2527 Male, age 74, both hemispheres 6.9
Hippocampus, CA2
nTPM: 7.9
1892 Male, age 76, both hemispheres 9.0
2113 Female, age 91, right hemisphere 8.9
2249 Male, age 74, both hemispheres 8.1
1963 Male, age 80, left hemisphere 7.6
1940 Female, age 85, left hemisphere 7.0
2437 Female, age 94, left hemisphere 6.7
Hippocampus, CA3
nTPM: 7.8
2436 Male, age 74, both hemispheres 9.2
1891 Female, age 85, both hemispheres 8.1
2137 Male, age 80, left hemisphere 8.0
1867 Male, age 76, both hemispheres 7.8
2620 Female, age 94, left hemisphere 7.8
2861 Female, age 67, both hemispheres 6.2
Parahippocampal cortex
nTPM: 8.2
2250 Female, age 67, right hemisphere 10.3
1850 Male, age 80, both hemispheres 9.7
1933 Female, age 85, both hemispheres 9.5
2245 Female, age 91, both hemispheres 8.4
2018 Male, age 76, both hemispheres 7.9
2693 Female, age 94, both hemispheres 7.9
2692 Male, age 74, both hemispheres 7.4
2532 Female, age 72, left hemisphere 7.2
1990 Female, age 91, right hemisphere 7.1
2622 Female, age 67, right hemisphere 6.2
Perirhinal gyrus
nTPM: 9.7
1841 Female, age 85, right hemisphere 10.6
1847 Female, age 91, left hemisphere 10.6
1794 Male, age 80, right hemisphere 10.2
2521 Female, age 94, right hemisphere 9.9
2848 Male, age 76, right hemisphere 7.3
Subiculum
nTPM: 7.1
2729 Female, age 91, right hemisphere 8.0
1977 Female, age 85, both hemispheres 7.5
1901 Male, age 80, both hemispheres 7.4
2042 Male, age 76, both hemispheres 6.9
2619 Male, age 74, both hemispheres 6.9
2438 Female, age 94, left hemisphere 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.2
Samples: 197

Max nTPM: 10.6
Min nTPM: 2.5
Std nTPM: 1.3
Median nTPM: 5.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 10.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 10.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 9.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 8.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 8.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 7.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 7.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 7.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 7.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 7.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 7.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.6
FF:10153-102I9 76 years, female 7.9
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.4
Pig sample Sample description nTPM
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.3
Sample A Female 4.3
Sample B Female 5.7
Sample C Male 5.7
Sample D Male 5.8
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.1
Sample A Female 4.1
Sample B Female 4.9
Sample C Male 5.1
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.8
Sample A Female 5.4
Sample B Female 4.8
Sample C Male 5.2
Sample D Male 6.0
Ventral hippocampus
nTPM: 5.3
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.1
Sample A Female 5.7
Sample B Female 6.5
Sample C Male 4.1
Sample D Male 4.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 26.1
Sample A Male 26.1
Sample B Male 27.3
Sample C Female 30.7
Sample D Female 26.4
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.1
Sample A Male 27.2
Sample B Male 22.8
Sample C Female 22.1
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71616361 Antisense, RP_050927_02_G06, Mouse strain C57BL/6J (56 days, male) 1.1

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