HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:37.6 nTPM
HPA Brain:28.0 nTPM
GTEx:37.6 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:25.5 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018479
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1855 Male, age 76, left hemisphere 29.9
2529 Female, age 94, left hemisphere 28.8
1911 Female, age 85, right hemisphere 28.2
1898 Male, age 80, left hemisphere 27.6
2621 Female, age 67, right hemisphere 27.3
2148 Female, age 91, left hemisphere 25.8
Dentate gyrus
nTPM: 25.5
2010 Male, age 76, both hemispheres 34.0
2246 Female, age 85, both hemispheres 27.8
2530 Female, age 94, left hemisphere 26.2
2528 Male, age 74, both hemispheres 26.0
2531 Female, age 67, both hemispheres 21.6
1927 Female, age 91, both hemispheres 17.0
Entorhinal gyrus
nTPM: 23.5
2117 Female, age 91, right hemisphere 31.8
2764 Male, age 80, right hemisphere 24.6
2686 Male, age 75, right hemisphere 23.9
1787 Male, age 76, left hemisphere 22.6
1938 Female, age 85, left hemisphere 21.1
2613 Female, age 94, left hemisphere 17.2
Hippocampus, CA1
nTPM: 26.0
2045 Male, age 76, both hemispheres 29.3
2527 Male, age 74, both hemispheres 26.8
1873 Female, age 85, both hemispheres 25.2
2082 Female, age 91, right hemisphere 24.4
2749 Male, age 80, left hemisphere 24.1
Hippocampus, CA2
nTPM: 25.4
2249 Male, age 74, both hemispheres 29.6
2437 Female, age 94, left hemisphere 26.3
1963 Male, age 80, left hemisphere 25.8
2113 Female, age 91, right hemisphere 25.8
1940 Female, age 85, left hemisphere 24.2
1892 Male, age 76, both hemispheres 20.6
Hippocampus, CA3
nTPM: 25.5
2436 Male, age 74, both hemispheres 32.6
1891 Female, age 85, both hemispheres 29.6
1867 Male, age 76, both hemispheres 28.8
2137 Male, age 80, left hemisphere 22.4
2620 Female, age 94, left hemisphere 19.9
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 24.9
2018 Male, age 76, both hemispheres 37.5
2692 Male, age 74, both hemispheres 30.7
2622 Female, age 67, right hemisphere 27.5
2532 Female, age 72, left hemisphere 26.7
2245 Female, age 91, both hemispheres 25.3
2250 Female, age 67, right hemisphere 23.1
1850 Male, age 80, both hemispheres 21.5
1990 Female, age 91, right hemisphere 20.5
1933 Female, age 85, both hemispheres 18.8
2693 Female, age 94, both hemispheres 17.4
Perirhinal gyrus
nTPM: 20.2
2521 Female, age 94, right hemisphere 23.8
1847 Female, age 91, left hemisphere 21.4
1794 Male, age 80, right hemisphere 20.8
1841 Female, age 85, right hemisphere 18.2
2848 Male, age 76, right hemisphere 16.8
Subiculum
nTPM: 28.0
2042 Male, age 76, both hemispheres 32.6
2619 Male, age 74, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.0
2438 Female, age 94, left hemisphere 27.2
2729 Female, age 91, right hemisphere 27.2
1977 Female, age 85, both hemispheres 24.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 37.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.6
Samples: 197

Max nTPM: 72.9
Min nTPM: 19.5
Std nTPM: 9.7
Median nTPM: 36.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 72.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 68.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 67.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 65.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 63.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 57.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 52.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 52.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 52.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 17.8
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.0
Pig sample Sample description nTPM
Subiculum
nTPM: 14.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 12.9
Sample A Female 16.7
Sample B Female 14.2
Sample C Male 12.9
Sample D Male 14.8
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 14.3
Sample A Female 22.3
Sample B Female 14.3
Sample C Male 16.3
Sample D Male 15.2
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.3
Sample A Female 12.5
Sample B Female 16.9
Sample C Male 15.0
Sample D Male 12.3
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.5
Sample A Female 15.0
Sample B Female 12.5
Sample C Male 15.0
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 22.9
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 22.9
Sample C Female 22.3
Sample D Female 22.2
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 27.3
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 25.4
Sample C Female 24.9
Sample D Female 27.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
75694367 Antisense, RP_060518_03_F08, Mouse strain C57BL/6J (56 days, male) 2.1

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