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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFPI is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
722.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
633.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
594.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
563.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
505.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
460.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
449.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
438.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
422.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
419.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
415.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
407.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
375.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
350.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
335.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
335.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
331.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
314.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
298.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
296.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
296.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
283.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
280.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
261.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
248.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
246.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
240.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
233.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
227.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
225.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
223.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
217.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
205.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
205.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
200.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
198.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
198.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
197.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
196.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
196.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
191.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
190.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
190.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
187.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
187.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
185.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
184.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
183.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
179.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
175.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
172.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
171.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
169.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
167.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
166.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
164.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
163.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
160.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
158.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
158.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
156.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
156.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
154.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
152.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
151.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
150.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
150.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
149.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
143.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
140.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
136.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
134.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
134.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
134.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
134.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
129.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
127.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
127.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
126.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
126.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
125.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
125.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
125.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
124.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
124.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
122.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
120.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
120.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
119.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
118.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
118.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
116.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
116.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
116.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
115.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
115.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
114.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
114.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
114.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
114.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
112.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
112.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
112.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
110.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
109.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
109.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
108.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
107.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
107.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
107.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
107.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
107.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
107.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
106.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
106.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
106.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
106.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
106.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
105.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
103.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
102.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
102.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
101.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
101.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
101.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
100.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
99.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
98.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
98.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
98.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
97.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
96.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
95.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
94.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
94.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
93.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
93.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
92.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
92.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
92.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
92.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
91.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
91.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
90.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
89.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
89.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
89.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
89.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
89.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
87.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
87.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
85.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
85.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
84.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
84.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
83.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
82.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
81.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
80.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
80.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
80.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
79.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
79.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
79.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
79.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
78.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
78.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
78.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
77.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
77.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
76.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
76.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
76.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
75.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
75.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
75.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
75.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
74.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
74.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
73.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
72.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
72.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
72.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
72.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
72.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
72.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
71.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
71.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
71.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
70.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
69.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
69.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
68.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
68.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
68.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
68.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
67.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
67.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
67.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
67.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
67.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
67.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
66.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
66.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
66.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
66.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
65.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
65.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
64.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
64.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
64.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
64.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
64.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
64.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
63.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
63.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
63.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
63.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
63.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
62.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
62.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
62.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
62.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
62.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
62.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
61.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
61.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
61.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
60.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
60.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
60.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
58.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
57.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
57.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
57.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
56.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
56.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
55.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
54.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
54.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
53.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
53.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
53.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
52.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
52.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
52.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
52.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
52.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
52.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
51.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
51.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
51.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
51.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
51.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
50.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
49.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
49.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
49.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
48.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
48.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
47.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
47.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
47.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
45.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
45.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
45.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
45.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
44.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
44.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
43.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
43.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
43.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
43.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
42.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
41.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
41.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
40.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
40.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
40.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
40.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
40.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
40.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
39.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
39.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
38.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
38.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
37.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
36.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
36.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
36.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
36.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
36.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
35.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
35.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
35.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
34.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
33.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
33.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
33.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
33.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
32.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
32.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
31.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
31.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
31.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
30.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
30.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
30.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
30.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
28.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
27.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
27.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
27.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
25.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
25.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
25.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
25.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
24.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
24.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
24.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
23.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
22.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
21.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
20.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
20.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
18.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
18.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
16.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
15.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
15.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
6.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
3.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFPI is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.3
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
661.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
316.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
303.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
296.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
267.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
264.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
225.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
222.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
211.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
206.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
200.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
179.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
176.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
175.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
173.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
173.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
172.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
172.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
167.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
166.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
159.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
158.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
157.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
157.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
157.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
152.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
148.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
147.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
144.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
133.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
129.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
119.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
119.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
119.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
116.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
113.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
113.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
112.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
112.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
110.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
108.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
106.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
105.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
103.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
102.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
101.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
101.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
100.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
100.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
99.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
98.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
95.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
95.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
94.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
93.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
92.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
90.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
89.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
88.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
88.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
87.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
85.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
85.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
85.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
83.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
83.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
82.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
81.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
81.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
80.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
80.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
79.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
79.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
76.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
76.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
75.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
75.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
74.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
74.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
74.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
74.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
74.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
73.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
73.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
71.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
70.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
70.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
70.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
70.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
70.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
69.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
69.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
68.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
68.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
68.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
68.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
66.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
65.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
65.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
64.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
63.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
63.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
62.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
62.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
62.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
62.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
61.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
61.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
60.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
60.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
60.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
60.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
59.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
59.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
59.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
59.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
58.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
58.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
58.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
57.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
57.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
57.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
57.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
56.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
56.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
55.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
55.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
54.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
54.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
53.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
53.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
52.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
52.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
52.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
52.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
51.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
50.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
50.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
50.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
49.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
49.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
49.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
49.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
48.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
48.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
47.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
47.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
46.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
46.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
46.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
46.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
45.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
45.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
45.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
44.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
44.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
43.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
42.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
41.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
41.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
41.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
41.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
41.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
40.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
40.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
40.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
39.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
39.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
38.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
37.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
37.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
36.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
36.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
36.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
36.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
35.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
35.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
35.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
35.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
35.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
35.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
35.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
34.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
34.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
31.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
31.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
31.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
31.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
31.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
29.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
29.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
29.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
29.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
28.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
28.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
28.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
27.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
26.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
25.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
21.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
21.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
20.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
20.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
18.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
17.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
15.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
14.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
14.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
3.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
2.3
535
Tumor
2.2
977
Tumor
2.2
883
Tumor
2.0
1041
Tumor
1.9
755
Tumor
1.7
497
Tumor
1.6
963
Tumor
1.6
387
Tumor
1.6
351
Tumor
1.4
161
Tumor
1.4
823
Tumor
1.3
983
Tumor
1.2
493
Tumor
1.2
743
Tumor
1.2
487
Tumor
1.1
311
Tumor
1.1
383
Tumor
1.1
937
Tumor
1.1
533
Tumor
1.1
635
Tumor
1.0
815
Tumor
1.0
471
Tumor
1.0
343
Tumor
1.0
427
Tumor
1.0
367
Tumor
0.9
285
Tumor
0.9
477
Tumor
0.9
861
Tumor
0.8
131
Tumor
0.8
527
Tumor
0.8
1021
Tumor
0.7
557
Tumor
0.7
135
Tumor
0.7
925
Tumor
0.6
741
Tumor
0.6
445
Tumor
0.6
431
Tumor
0.6
813
Tumor
0.6
953
Tumor
0.6
525
Tumor
0.6
573
Tumor
0.6
685
Tumor
0.5
137
Tumor
0.5
363
Tumor
0.5
112
Tumor
0.4
435
Tumor
0.4
538
Normal
0.4
745
Tumor
0.4
915
Tumor
0.4
443
Tumor
0.4
523
Tumor
0.4
537
Tumor
0.4
553
Tumor
0.3
413
Tumor
0.3
554
Normal
0.3
451
Tumor
0.3
498
Normal
0.3
473
Tumor
0.3
923
Tumor
0.2
517
Tumor
0.2
867
Tumor
0.2
515
Tumor
0.2
737
Tumor
0.2
223
Tumor
0.2
355
Tumor
0.2
873
Tumor
0.1
975
Tumor
0.1
981
Tumor
0.1
483
Tumor
0.1
357
Tumor
0.1
1025
Tumor
0.1
744
Normal
0.1
567
Tumor
0.1
395
Tumor
0.1
878
Normal
0.0
426
Normal
0.0
344
Normal
0.0
697
Tumor
0.0
271
Tumor
0.0
267
Tumor
0.0
331
Tumor
-0.1
536
Normal
-0.1
213
Tumor
-0.1
423
Tumor
-0.1
455
Tumor
-0.1
368
Normal
-0.1
393
Tumor
-0.1
124
Normal
-0.1
636
Normal
-0.1
141
Tumor
-0.2
261
Tumor
-0.2
433
Tumor
-0.2
695
Tumor
-0.2
952
Normal
-0.2
187
Tumor
-0.2
914
Normal
-0.2
492
Normal
-0.2
877
Tumor
-0.2
545
Tumor
-0.2
1043
Tumor
-0.2
1028
Normal
-0.2
746
Normal
-0.3
222
Normal
-0.3
218
Normal
-0.3
297
Tumor
-0.3
185
Tumor
-0.3
375
Tumor
-0.3
145
Tumor
-0.3
327
Tumor
-0.3
1042
Normal
-0.3
461
Tumor
-0.3
191
Tumor
-0.3
217
Tumor
-0.3
982
Normal
-0.3
361
Tumor
-0.3
421
Tumor
-0.3
491
Tumor
-0.4
526
Normal
-0.4
967
Tumor
-0.4
463
Tumor
-0.4
484
Normal
-0.4
568
Normal
-0.4
663
Tumor
-0.4
384
Normal
-0.4
474
Normal
-0.4
534
Normal
-0.4
857
Tumor
-0.4
574
Normal
-0.4
865
Tumor
-0.4
785
Tumor
-0.4
365
Tumor
-0.4
376
Normal
-0.4
884
Normal
-0.4
125
Tumor
-0.4
196
Normal
-0.4
516
Normal
-0.4
214
Normal
-0.4
298
Normal
-0.4
518
Normal
-0.4
283
Tumor
-0.4
964
Normal
-0.4
1016
Normal
-0.4
392
Normal
-0.4
342
Normal
-0.5
312
Normal
-0.5
434
Normal
-0.5
1015
Tumor
-0.5
778
Normal
-0.5
494
Normal
-0.5
114
Normal
-0.5
524
Normal
-0.5
648
Normal
-0.5
221
Tumor
-0.5
672
Normal
-0.5
913
Tumor
-0.5
955
Tumor
-0.5
195
Tumor
-0.5
696
Normal
-0.5
951
Tumor
-0.5
984
Normal
-0.5
546
Normal
-0.5
415
Tumor
-0.5
412
Normal
-0.5
452
Normal
-0.5
436
Normal
-0.5
366
Normal
-0.5
724
Normal
-0.5
192
Normal
-0.5
444
Normal
-0.5
341
Tumor
-0.5
716
Normal
-0.6
446
Normal
-0.6
1026
Normal
-0.6
422
Normal
-0.6
742
Normal
-0.6
966
Normal
-0.6
113
Tumor
-0.6
686
Normal
-0.6
714
Normal
-0.6
352
Normal
-0.6
428
Normal
-0.6
978
Normal
-0.6
662
Normal
-0.6
388
Normal
-0.6
666
Normal
-0.6
728
Normal
-0.6
924
Normal
-0.6
424
Normal
-0.6
142
Normal
-0.6
727
Tumor
-0.6
814
Normal
-0.6
488
Normal
-0.6
171
Tumor
-0.6
851
Tumor
-0.6
314
Normal
-0.6
447
Tumor
-0.6
874
Normal
-0.7
432
Normal
-0.7
448
Normal
-0.7
664
Normal
-0.7
1014
Normal
-0.7
817
Tumor
-0.7
386
Normal
-0.7
816
Normal
-0.7
396
Normal
-0.7
528
Normal
-0.7
1022
Normal
-0.7
738
Normal
-0.7
882
Normal
-0.7
278
Normal
-0.7
313
Tumor
-0.8
128
Normal
-0.8
232
Normal
-0.8
385
Tumor
-0.8
671
Tumor
-0.8
921
Tumor
-0.8
227
Tumor
-0.8
468
Normal
-0.8
478
Normal
-0.8
268
Normal
-0.8
824
Normal
-0.8
615
Tumor
-0.8
647
Tumor
-0.8
394
Normal
-0.8
721
Tumor
-0.8
698
Normal
-0.8
881
Tumor
-0.8
414
Normal
-0.8
111
Normal
-0.8
138
Normal
-0.8
514
Normal
-0.8
162
Normal
-0.9
466
Normal
-0.9
353
Tumor
-0.9
911
Tumor
-0.9
715
Tumor
-0.9
943
Tumor
-0.9
965
Tumor
-0.9
1045
Tumor
-0.9
146
Normal
-0.9
416
Normal
-0.9
456
Normal
-0.9
756
Normal
-0.9
132
Normal
-0.9
723
Tumor
-0.9
642
Normal
-0.9
465
Tumor
-0.9
362
Normal
-0.9
912
Normal
-0.9
136
Normal
-0.9
481
Tumor
-0.9
472
Normal
-0.9
918
Normal
-0.9
262
Normal
-0.9
272
Normal
-0.9
563
Tumor
-1.0
186
Normal
-1.0
617
Tumor
-1.0
127
Tumor
-1.0
258
Normal
-1.0
722
Normal
-1.0
513
Tumor
-1.0
618
Normal
-1.0
627
Tumor
-1.0
332
Normal
-1.0
257
Tumor
-1.0
1031
Tumor
-1.0
148
Normal
-1.0
126
Normal
-1.0
286
Normal
-1.0
464
Normal
-1.0
956
Normal
-1.0
786
Normal
-1.0
354
Normal
-1.0
277
Tumor
-1.1
228
Normal
-1.1
922
Normal
-1.1
1013
Tumor
-1.1
172
Normal
-1.1
147
Tumor
-1.1
1032
Normal
-1.1
123
Tumor
-1.1
364
Normal
-1.1
1027
Tumor
-1.1
391
Tumor
-1.1
968
Normal
-1.1
462
Normal
-1.1
917
Tumor
-1.2
564
Normal
-1.2
482
Normal
-1.2
858
Normal
-1.2
358
Normal
-1.2
1044
Normal
-1.2
938
Normal
-1.2
957
Tumor
-1.2
188
Normal
-1.2
661
Tumor
-1.2
976
Normal
-1.2
944
Normal
-1.3
231
Tumor
-1.3
958
Normal
-1.3
916
Normal
-1.3
628
Normal
-1.3
328
Normal
-1.3
818
Normal
-1.3
572
Normal
-1.4
558
Normal
-1.4
356
Normal
-1.4
852
Normal
-1.4
777
Tumor
-1.4
1046
Normal
-1.4
571
Tumor
-1.4
212
Normal
-1.5
284
Normal
-1.5
665
Tumor
-1.5
954
Normal
-1.5
467
Tumor
-1.5
926
Normal
-1.6
224
Normal
-1.6
411
Tumor
-1.6
862
Normal
-1.6
616
Normal
-1.6
211
Tumor
-1.6
641
Tumor
-1.7
713
Tumor
-1.8
866
Normal
-1.9
864
Normal
-2.0
868
Normal
-2.0
863
Tumor
-2.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.