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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DBNDD1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
164.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
157.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
136.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
130.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
129.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
125.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
113.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
103.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
92.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
90.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
85.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
78.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
72.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
69.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
68.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
67.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
66.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
65.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
64.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
61.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
56.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
55.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
54.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
54.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
53.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
53.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
52.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
52.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
49.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
45.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
45.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
43.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
43.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
43.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
42.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
42.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
42.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
41.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
41.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
40.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
39.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
39.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
39.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
38.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
38.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
38.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
38.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
37.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
37.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
37.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
37.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
36.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
35.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
32.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
32.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
32.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
32.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
32.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
31.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
29.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
29.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
29.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
28.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
28.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
27.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
27.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
27.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
27.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
26.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
26.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
26.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
26.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
26.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
26.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
26.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
25.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
25.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
25.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
25.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
24.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
24.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
24.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
24.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
23.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
23.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
22.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
22.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
22.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
22.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
21.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
21.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
21.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
21.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
20.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
20.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
19.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
19.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
18.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
18.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
18.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
18.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
18.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
18.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
17.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
17.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
17.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
16.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
16.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
16.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
16.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
15.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
15.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
15.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
13.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
12.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
12.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
11.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
11.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
4.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
4.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
3.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
3.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
3.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
2.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
2.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
2.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DBNDD1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.5
Number of samples
231
Samples
Sample
Description
TPM
DO50811
0 years, male, NA, stage:1, alive, 450 days
136.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
100.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
88.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
77.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
76.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
59.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
57.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
56.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
53.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
49.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
43.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
41.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
41.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
40.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
38.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
35.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
35.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
35.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
34.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
32.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
30.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
30.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
30.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
29.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
28.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
28.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
27.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
27.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
26.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
25.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
25.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
25.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
24.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
24.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
23.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
23.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
23.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
22.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
21.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
19.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
18.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
18.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
18.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
17.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
17.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
15.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
15.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
14.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
12.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
10.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
9.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
8.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
8.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
5.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
5.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
5.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
4.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
3.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
2.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
2.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
2.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
2.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
2.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
2.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
1.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
1.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
1.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
1.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
1.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
1.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
1.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
1.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
1.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
1.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
1.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
0.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
2.1
231
Tumor
1.8
635
Tumor
1.4
977
Tumor
1.4
785
Tumor
1.4
445
Tumor
1.2
925
Tumor
1.2
268
Normal
1.1
487
Tumor
0.9
755
Tumor
0.9
777
Tumor
0.9
396
Normal
0.8
911
Tumor
0.8
488
Normal
0.8
914
Normal
0.7
884
Normal
0.7
388
Normal
0.7
641
Tumor
0.7
912
Normal
0.6
944
Normal
0.6
394
Normal
0.6
261
Tumor
0.5
883
Tumor
0.5
393
Tumor
0.5
923
Tumor
0.5
563
Tumor
0.5
494
Normal
0.5
878
Normal
0.5
955
Tumor
0.5
484
Normal
0.5
746
Normal
0.4
938
Normal
0.4
956
Normal
0.4
916
Normal
0.4
573
Tumor
0.4
943
Tumor
0.4
954
Normal
0.4
921
Tumor
0.4
271
Tumor
0.4
564
Normal
0.4
386
Normal
0.4
498
Normal
0.4
756
Normal
0.4
882
Normal
0.4
814
Normal
0.4
915
Tumor
0.4
568
Normal
0.3
786
Normal
0.3
558
Normal
0.3
493
Tumor
0.3
444
Normal
0.3
778
Normal
0.3
491
Tumor
0.3
572
Normal
0.2
392
Normal
0.2
647
Tumor
0.2
387
Tumor
0.2
492
Normal
0.2
465
Tumor
0.2
813
Tumor
0.2
952
Normal
0.2
745
Tumor
0.2
483
Tumor
0.2
433
Tumor
0.2
978
Normal
0.2
913
Tumor
0.2
557
Tumor
0.2
574
Normal
0.2
232
Normal
0.2
881
Tumor
0.1
446
Normal
0.1
922
Normal
0.1
466
Normal
0.1
443
Tumor
0.1
877
Tumor
0.1
267
Tumor
0.1
671
Tumor
0.0
953
Tumor
0.0
926
Normal
0.0
452
Normal
0.0
615
Tumor
0.0
937
Tumor
0.0
567
Tumor
-0.1
436
Normal
-0.1
951
Tumor
-0.1
636
Normal
-0.1
464
Normal
-0.1
663
Tumor
-0.1
984
Normal
-0.1
917
Tumor
-0.1
257
Tumor
-0.1
468
Normal
-0.1
456
Normal
-0.1
455
Tumor
-0.2
616
Normal
-0.2
924
Normal
-0.2
982
Normal
-0.2
395
Tumor
-0.2
467
Tumor
-0.2
451
Tumor
-0.2
1014
Normal
-0.3
571
Tumor
-0.3
918
Normal
-0.3
432
Normal
-0.3
1015
Tumor
-0.3
434
Normal
-0.3
618
Normal
-0.3
435
Tumor
-0.4
628
Normal
-0.4
642
Normal
-0.4
497
Tumor
-0.4
662
Normal
-0.4
1016
Normal
-0.5
272
Normal
-0.5
262
Normal
-0.5
385
Tumor
-0.5
1013
Tumor
-0.5
391
Tumor
-0.6
983
Tumor
-0.6
617
Tumor
-0.6
666
Normal
-0.6
431
Tumor
-0.6
258
Normal
-0.6
648
Normal
-0.7
463
Tumor
-0.7
672
Normal
-0.7
665
Tumor
-0.7
664
Normal
-0.8
981
Tumor
-0.8
661
Tumor
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
141
Tumor
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
277
Tumor
N/A
278
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
857
Tumor
N/A
737
Tumor
N/A
858
Normal
N/A
738
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
741
Tumor
N/A
862
Normal
N/A
742
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
311
Tumor
N/A
553
Tumor
N/A
312
Normal
N/A
554
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
331
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
223
Tumor
N/A
344
Normal
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.