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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
218.6
nTPM
FANTOM5:
275.7
Scaled Tags Per Million
Pig:
74.8
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
218.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 128.2
2301
Female, age 85, both hemispheres
140.3
2090
Male, age 80, both hemispheres
134.8
1984
Male, age 76, both hemispheres
121.9
2188
Female, age 91, both hemispheres
115.7
Dorsal cochlear nucleus nTPM: 129.0
2058
Male, age 76, both hemispheres
139.0
2378
Male, age 80, both hemispheres
137.9
2370
Male, age 61, both hemispheres
136.8
2802
Male, age 74, right hemisphere
122.2
2187
Female, age 91, both hemispheres
109.3
Dorsal tegmental nucleus nTPM: 167.2
2358
Male, age 61, both hemispheres
257.9
1936
Male, age 76, left hemisphere
155.6
2326
Male, age 74, both hemispheres
128.0
2083
Male, age 80, both hemispheres
127.2
Dorsolateral tegmental area nTPM: 163.2
2337
Male, age 61, both hemispheres
221.1
2360
Male, age 74, both hemispheres
208.9
2654
Male, age 80, both hemispheres
137.5
2141
Male, age 76, both hemispheres
126.1
2751
Female, age 85, both hemispheres
122.4
Kolliker-Fuse nucleus nTPM: 218.2
2315
Male, age 76, right hemisphere
411.4
2163
Male, age 80, both hemispheres
149.3
2793
Female, age 91, left hemisphere
93.9
Lateral lemniscal nuclei nTPM: 86.5
2746
Female, age 85, left hemisphere
138.2
2169
Male, age 76, both hemispheres
92.8
2453
Male, age 74, right hemisphere
77.4
2036
Male, age 80, both hemispheres
68.9
2320
Female, age 91, left hemisphere
55.3
Lateral parabrachial nucleus nTPM: 218.6
2792
Male, age 76, both hemispheres
300.3
2139
Female, age 85, right hemisphere
285.4
2013
Male, age 80, both hemispheres
168.8
2790
Male, age 61, both hemispheres
119.9
Lateral vestibular nucleus nTPM: 137.0
2311
Male, age 80, both hemispheres
139.3
2184
Male, age 76, both hemispheres
134.8
Locus coeruleus nTPM: 109.3
2317
Female, age 72, unknown
148.0
2123
Female, age 91, both hemispheres
136.5
2788
Male, age 74, unknown
113.5
1980
Male, age 76, both hemispheres
111.4
2014
Male, age 55, unknown
90.9
2720
Male, age 74, both hemispheres
84.7
2162
Male, age 80, both hemispheres
80.1
Medial parabrachial nucleus nTPM: 122.0
2854
Male, age 80, both hemispheres
134.1
2170
Female, age 91, both hemispheres
125.7
2156
Male, age 61, both hemispheres
124.0
2463
Female, age 85, right hemisphere
114.7
2786
Male, age 76, both hemispheres
111.3
Medial periolivary nuclei nTPM: 129.0
2791
Male, age 74, right hemisphere
209.0
2063
Male, age 76, both hemispheres
125.5
2081
Male, age 80, both hemispheres
117.7
2171
Female, age 85, both hemispheres
111.9
2458
Female, age 91, both hemispheres
80.9
Motor facial nucleus nTPM: 115.1
2365
Male, age 74, right hemisphere
157.8
2795
Female, age 91, both hemispheres
130.8
2062
Male, age 76, both hemispheres
120.8
2126
Male, age 61, both hemispheres
120.5
2697
Female, age 85, both hemispheres
99.9
2327
Male, age 80, both hemispheres
60.6
Motor trigeminal nucleus nTPM: 101.5
2335
Male, age 61, both hemispheres
138.4
2309
Male, age 76, both hemispheres
123.7
2079
Male, age 80, both hemispheres
99.4
2560
Male, age 74, both hemispheres
78.5
2321
Female, age 91, both hemispheres
67.6
Nuclei of the trapezoid body nTPM: 107.6
1983
Male, age 76, both hemispheres
144.6
2735
Female, age 85, both hemispheres
117.9
2159
Male, age 61, both hemispheres
98.7
2368
Female, age 91, both hemispheres
88.7
2166
Male, age 80, both hemispheres
88.1
Nucleus raphe magnus nTPM: 107.9
2051
Male, age 76, both hemispheres
169.1
2455
Male, age 74, both hemispheres
144.6
2172
Female, age 85, both hemispheres
90.7
2328
Male, age 80, both hemispheres
86.1
2160
Male, age 61, both hemispheres
86.0
2459
Female, age 91, both hemispheres
70.9
Paramedian reticular nucleus nTPM: 133.2
2052
Male, age 76, both hemispheres
175.4
2057
Male, age 80, both hemispheres
123.4
2050
Female, age 85, both hemispheres
118.2
2313
Male, age 61, both hemispheres
115.9
Pedunculopontine tegmental nucleus nTPM: 130.4
2338
Male, age 61, both hemispheres
179.2
2334
Male, age 80, both hemispheres
119.0
1921
Female, age 85, both hemispheres
93.0
Pontine nuclei nTPM: 94.0
2115
Male, age 80, left hemisphere
115.9
2109
Female, age 72, unknown
113.4
2787
Female, age 85, both hemispheres
107.0
1863
Male, age 55, unknown
104.5
1968
Male, age 76, left hemisphere
102.7
2319
Female, age 91, both hemispheres
82.2
2727
Male, age 61, right hemisphere
77.3
2454
Male, age 74, left hemisphere
49.1
Pontine raphe nucleus nTPM: 118.0
2853
Male, age 76, midline
126.0
2122
Female, age 85, midline
110.1
Posteroventral cochlear nucleus nTPM: 128.7
2371
Male, age 61, both hemispheres
149.3
2341
Male, age 80, both hemispheres
142.7
2070
Male, age 76, both hemispheres
135.9
2135
Female, age 91, both hemispheres
125.0
2752
Female, age 85, both hemispheres
90.7
Principal sensory trigeminal nucleus nTPM: 98.3
2324
Male, age 76, both hemispheres
140.2
2158
Male, age 61, both hemispheres
94.8
2008
Male, age 80, left hemisphere
92.1
2367
Female, age 91, left hemisphere
66.3
Reticular pontine nucleus, caudal nTPM: 95.7
2092
Male, age 76, both hemispheres
167.8
2457
Female, age 91, both hemispheres
74.4
2332
Male, age 80, right hemisphere
70.6
2559
Male, age 74, both hemispheres
70.1
Reticular pontine nucleus, oral nTPM: 98.7
1939
Male, age 80, both hemispheres
128.6
2167
Male, age 76, both hemispheres
114.1
2012
Female, age 85, both hemispheres
113.1
2366
Female, age 91, both hemispheres
88.5
2361
Male, age 74, both hemispheres
49.5
Reticulotegmental nucleus nTPM: 96.4
2333
Male, age 80, both hemispheres
114.5
2325
Male, age 76, both hemispheres
108.8
2322
Female, age 91, both hemispheres
82.0
2452
Male, age 74, both hemispheres
80.3
Spinal trigeminal nucleus, oral nTPM: 116.6
2737
Female, age 85, both hemispheres
134.3
2164
Male, age 80, both hemispheres
123.0
1978
Male, age 76, both hemispheres
92.6
Subcoeruleus area nTPM: 96.8
2369
Female, age 85, left hemisphere
123.2
1958
Male, age 80, both hemispheres
108.1
2089
Male, age 76, left hemisphere
92.7
2451
Male, age 74, both hemispheres
89.0
2323
Female, age 91, left hemisphere
70.9
Superior olive nTPM: 117.3
2364
Male, age 74, right hemisphere
192.7
2020
Male, age 76, both hemispheres
138.4
1875
Female, age 85, both hemispheres
104.1
2329
Male, age 80, right hemisphere
78.2
2561
Female, age 91, both hemispheres
73.0
Ventral periolivary nuclei nTPM: 127.9
2023
Male, age 76, both hemispheres
164.2
2130
Female, age 85, both hemispheres
161.9
2165
Male, age 80, both hemispheres
115.3
2794
Female, age 91, left hemisphere
70.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 120.9
1959
Male, age 76, both hemispheres
154.0
2840
Female, age 85, both hemispheres
140.9
2359
Male, age 61, both hemispheres
136.8
2161
Male, age 80, both hemispheres
115.1
2449
Male, age 74, both hemispheres
102.7
2456
Female, age 91, both hemispheres
76.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
