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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:91.9 nTPM
HPA Brain:63.4 nTPM
GTEx:91.9 nTPM
Pig:29.1 nTPM
Mouse:35.3 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.4
1961 Female, age 42, unknown 50.1
2226 Male, age 75, left hemisphere 46.8
Dorsomedial nucleus
nTPM: 58.8
1989 Male, age 62, unknown 75.5
2041 Female, age 72, unknown 54.2
2017 Female, age 42, unknown 46.7
Lateral hypothalamic area
nTPM: 62.6
1791 Male, age 80, right hemisphere 74.6
2271 Male, age 75, both hemispheres 65.3
2412 Male, age 62, unknown 63.0
2228 Male, age 66, unknown 47.6
Mammillary body
nTPM: 63.4
1923 Female, age 72, unknown 78.2
2413 Male, age 66, unknown 64.0
1945 Male, age 80, right hemisphere 61.3
1948 Female, age 72, unknown 58.5
1834 Female, age 42, unknown 54.9
Paraventricular nucleus
nTPM: 41.9
2700 Male, age 62, unknown 41.9
Preoptic area
nTPM: 54.1
1861 Female, age 42, unknown 56.4
1907 Male, age 80, right hemisphere 55.6
2414 Female, age 72, unknown 50.3
Supraoptic nucleus
nTPM: 57.4
2835 Female, age 72, unknown 59.6
2043 Male, age 62, unknown 57.2
1894 Female, age 72, unknown 55.3
Ventromedial nucleus
nTPM: 49.2
1982 Female, age 72, unknown 54.4
1822 Female, age 42, unknown 44.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 91.9
Samples: 257

Max nTPM: 199.9
Min nTPM: 21.6
Std nTPM: 26.3
Median nTPM: 86.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 199.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 194.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 189.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 187.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 166.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 163.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 153.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 152.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 146.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 144.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 142.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 140.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 139.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 138.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 135.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 134.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 134.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 133.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 133.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 130.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 128.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 128.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 127.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 126.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 126.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 125.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 125.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 125.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 123.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 121.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 120.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 120.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 120.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 119.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 119.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 119.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 119.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 118.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 118.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 117.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 116.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 115.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 114.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 113.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 113.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 113.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 112.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 112.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 111.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 110.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 109.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 109.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 108.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 107.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 107.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 107.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 106.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 106.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 106.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 105.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 105.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 104.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 103.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 103.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 103.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 102.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 102.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 102.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 102.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 102.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 102.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 101.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 101.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 101.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 101.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 100.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 100.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 100.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 100.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 100.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 99.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 99.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 99.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 98.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 98.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 98.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 98.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 97.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 97.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 97.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 97.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 97.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 97.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 97.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 96.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 96.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 95.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 95.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 94.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 94.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 94.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 94.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 93.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 92.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 92.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 92.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 92.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 91.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 90.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 90.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 90.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 90.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 90.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 89.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 89.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 89.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 88.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 88.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 88.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 87.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 87.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 87.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 87.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 87.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 86.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 86.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 86.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 85.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 85.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 85.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 85.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 85.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 85.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 84.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 84.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 84.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 84.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 84.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 83.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 83.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 83.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 83.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 83.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 83.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 83.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 83.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 83.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 82.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 82.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 82.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 82.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 81.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 81.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 81.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 81.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 81.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 81.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 81.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 80.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 80.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 80.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 80.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 80.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 79.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 79.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 79.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 79.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 79.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 79.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 78.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 78.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 78.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 78.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 78.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 77.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 77.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 77.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 77.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 77.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 77.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 76.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 76.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 76.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 76.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 76.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 76.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 75.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 75.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 74.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 74.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 74.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 73.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 73.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 73.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 73.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 73.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 73.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 73.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 73.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 72.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 72.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 72.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 72.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 71.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 71.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 70.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 70.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 70.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 70.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 70.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 70.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 69.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 69.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 69.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 68.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 68.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 66.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 66.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 65.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 65.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 65.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 65.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 64.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 64.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 64.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 64.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 63.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 63.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 63.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 63.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 63.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 62.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 61.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 61.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 61.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 59.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 59.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 57.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 56.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 56.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 53.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 51.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 36.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 34.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 21.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 29.1
Samples: 4

Max nTPM: 37.5
Min nTPM: 21.8
Sample A Female 37.5
Sample B Female 28.2
Sample C Male 28.9
Sample D Male 21.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 35.3
Samples: 4

Max nTPM: 39.7
Min nTPM: 30.7
Sample A Male 36.3
Sample B Male 39.7
Sample C Female 30.7
Sample D Female 34.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
74881790 Antisense, RP_060315_04_D03, Mouse strain C57BL/6J (56 days, male) 2.7
69528052 Antisense, RP_050421_03_A05, Mouse strain C57BL/6J (56 days, male) 0.1

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