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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPAL3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
17.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
9.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
8.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
8.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
5.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPAL3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
50.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
39.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
38.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
35.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
33.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
32.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
27.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
26.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
25.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
25.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
25.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
25.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
23.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
23.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
23.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
22.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
21.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
19.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
18.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
16.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
16.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
14.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
12.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
12.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
10.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
9.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
6.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
3.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPAL3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
42.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
40.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
38.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
32.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
24.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
23.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
23.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
20.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
19.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
19.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
18.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
12.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
12.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
7.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NIPAL3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
63.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
53.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
52.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
49.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
49.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
48.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
47.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
46.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
44.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
43.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
42.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
41.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
40.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
38.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
34.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
34.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
31.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
31.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
30.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
30.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
24.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
24.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
22.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
21.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
20.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
18.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
17.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
13.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
12.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
9.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
8.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
7.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
5.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
4.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
3.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
2.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.1
CPT0069160003
Tumor
0.9
CPT0079510001
Normal
0.9
CPT0017850003
Tumor
0.8
CPT0012180003
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0089020003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0069000003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0088710001
Normal
0.4
CPT0078990003
Tumor
0.4
CPT0069190001
Normal
0.4
CPT0006440003
Tumor
0.3
CPT0006530001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0063640001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0025920001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0026420001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0084560003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0089040001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0012090003
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0075560003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0081880003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0078530001
Normal
-0.5
CPT0088970003
Tumor
-1.0
CPT0012550003
Tumor
-1.5
CPT0001190001
Normal
-1.9
CPT0086890003
Normal
-1.9
CPT0081990003
Tumor
-1.9
CPT0063330001
Normal
-1.9
CPT0001180009
Tumor
-2.0
CPT0082010001
Normal
-2.0
CPT0024670003
Tumor
-2.1
CPT0086870003
Tumor
-2.4
CPT0079180003
Tumor
-2.4
CPT0011240003
Tumor
-2.9
CPT0024680001
Normal
-3.0
CPT0012370003
Tumor
-4.1
CPT0013790003
Normal
-4.1
CPT0012770003
Normal
-4.2
CPT0012570003
Normal
-4.5
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0076330003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0001550001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0066520001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0088630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0088920001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0079300001
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
