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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFH is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
468.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2180.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
2105.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1792.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1649.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1635.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1596.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1428.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1423.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1409.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1406.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1365.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1313.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1249.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1243.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1214.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1202.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1175.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1163.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1162.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1146.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1140.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1068.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1064.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1041.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1028.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1017.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1017.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
982.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
978.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
969.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
936.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
910.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
905.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
899.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
896.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
888.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
884.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
882.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
876.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
875.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
873.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
864.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
860.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
851.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
829.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
818.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
814.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
805.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
803.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
787.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
784.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
775.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
775.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
773.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
764.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
757.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
750.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
750.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
750.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
746.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
743.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
743.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
741.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
731.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
728.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
726.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
722.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
705.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
704.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
697.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
695.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
690.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
689.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
684.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
681.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
681.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
675.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
672.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
668.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
666.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
650.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
627.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
626.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
622.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
622.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
620.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
620.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
618.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
617.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
611.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
609.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
609.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
608.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
607.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
597.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
590.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
587.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
587.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
583.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
582.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
581.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
578.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
577.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
577.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
576.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
573.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
573.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
566.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
566.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
551.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
547.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
542.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
536.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
535.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
534.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
534.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
532.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
529.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
527.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
525.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
525.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
524.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
523.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
521.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
520.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
518.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
518.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
511.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
508.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
508.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
501.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
501.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
500.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
498.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
490.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
489.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
485.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
482.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
481.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
475.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
470.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
469.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
467.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
464.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
462.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
456.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
456.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
451.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
447.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
447.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
447.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
447.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
446.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
441.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
437.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
434.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
434.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
433.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
430.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
426.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
421.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
418.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
418.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
413.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
412.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
412.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
411.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
409.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
408.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
404.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
403.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
400.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
392.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
390.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
389.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
389.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
384.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
383.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
382.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
382.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
381.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
380.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
380.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
380.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
377.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
374.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
372.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
371.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
370.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
369.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
368.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
368.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
367.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
366.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
366.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
366.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
365.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
362.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
359.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
357.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
354.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
353.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
351.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
349.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
349.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
348.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
348.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
345.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
343.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
342.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
340.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
338.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
338.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
335.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
334.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
334.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
333.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
333.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
332.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
329.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
328.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
326.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
323.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
322.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
319.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
318.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
317.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
317.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
312.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
309.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
309.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
307.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
305.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
305.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
304.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
303.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
302.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
301.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
301.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
298.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
294.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
291.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
291.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
286.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
284.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
277.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
277.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
277.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
273.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
272.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
271.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
271.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
270.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
269.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
269.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
268.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
267.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
266.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
265.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
265.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
263.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
261.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
260.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
259.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
256.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
253.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
250.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
249.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
247.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
246.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
246.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
245.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
235.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
235.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
234.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
233.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
232.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
230.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
228.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
227.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
226.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
223.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
223.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
223.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
220.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
218.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
218.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
213.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
211.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
211.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
211.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
209.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
205.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
205.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
202.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
199.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
197.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
196.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
194.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
191.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
176.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
176.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
175.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
174.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
169.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
165.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
162.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
162.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
161.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
160.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
154.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
150.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
149.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
147.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
146.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
144.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
142.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
142.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
139.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
135.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
130.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
127.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
127.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
126.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
125.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
123.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
118.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
117.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
116.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
109.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
105.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
97.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
97.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
92.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
92.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
88.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
77.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
75.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
71.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
69.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
61.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
61.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
54.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
53.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
48.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
48.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
45.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
44.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
33.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
31.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
28.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
25.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
17.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
8.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFH is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
495.9
Number of samples
231
Samples
Sample
Description
TPM
DO45237
0 years, male, NA, stage:2, alive, 900 days
2160.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
1974.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1580.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1541.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
1504.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
1317.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1305.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1266.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1237.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1213.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
1142.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
1113.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
1062.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
1061.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
1030.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
1029.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
1002.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
999.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
985.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
978.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
950.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
944.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
902.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
895.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
890.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
862.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
855.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
848.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
844.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
839.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
834.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
832.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
830.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
821.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
820.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
810.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
774.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
764.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
764.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
760.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
755.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
741.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
741.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
733.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
727.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
725.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
723.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
721.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
714.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
702.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
699.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
693.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
691.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
680.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
677.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
670.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
669.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
660.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
656.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
650.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
644.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
643.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
642.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
635.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
635.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
634.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
633.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
625.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
625.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
618.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
615.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
609.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
595.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
591.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
590.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
584.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
573.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
565.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
565.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
563.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
560.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
551.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
549.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
545.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
545.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
544.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
540.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
540.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
530.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
526.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
524.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
521.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
518.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
517.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
514.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
512.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
511.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
510.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
508.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
504.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
499.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
496.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
491.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
488.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
487.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
486.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
483.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
480.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
477.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
476.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
474.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
466.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
464.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
463.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
459.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
450.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
450.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
446.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
446.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
445.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
443.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
443.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
437.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
433.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
431.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
430.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
428.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
427.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
427.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
409.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
406.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
405.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
403.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
397.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
396.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
395.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
392.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
387.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
374.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
374.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
364.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
363.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
362.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
362.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
359.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
358.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
349.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
348.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
344.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
343.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
341.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
336.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
334.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
334.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
331.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
330.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
330.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
327.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
326.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
324.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
321.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
320.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
305.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
296.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
296.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
296.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
293.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
292.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
289.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
288.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
287.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
283.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
275.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
264.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
259.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
251.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
251.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
244.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
239.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
237.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
230.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
225.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
222.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
214.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
212.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
210.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
200.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
199.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
178.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
176.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
170.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
166.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
158.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
150.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
149.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
131.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
128.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
127.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
114.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
110.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
107.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
106.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
104.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
102.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
100.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
97.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
82.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
71.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
69.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
68.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
68.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
64.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
64.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
63.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
56.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
53.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
52.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
48.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
40.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
40.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
39.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
36.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
35.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
35.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
30.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
22.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
343
Tumor
1.9
697
Tumor
1.5
527
Tumor
1.5
877
Tumor
1.4
823
Tumor
1.4
425
Tumor
1.2
813
Tumor
1.2
777
Tumor
1.1
375
Tumor
1.1
865
Tumor
0.9
817
Tumor
0.9
455
Tumor
0.9
147
Tumor
0.9
1021
Tumor
0.8
223
Tumor
0.7
461
Tumor
0.7
713
Tumor
0.7
445
Tumor
0.7
497
Tumor
0.7
427
Tumor
0.6
525
Tumor
0.6
523
Tumor
0.6
355
Tumor
0.6
745
Tumor
0.6
395
Tumor
0.6
977
Tumor
0.6
963
Tumor
0.6
975
Tumor
0.6
515
Tumor
0.6
283
Tumor
0.6
491
Tumor
0.5
363
Tumor
0.5
857
Tumor
0.5
471
Tumor
0.5
863
Tumor
0.5
393
Tumor
0.5
135
Tumor
0.5
545
Tumor
0.5
1025
Tumor
0.4
955
Tumor
0.4
192
Normal
0.4
573
Tumor
0.4
635
Tumor
0.4
785
Tumor
0.4
557
Tumor
0.4
277
Tumor
0.4
915
Tumor
0.4
141
Tumor
0.4
1041
Tumor
0.3
113
Tumor
0.3
1015
Tumor
0.3
937
Tumor
0.3
517
Tumor
0.3
535
Tumor
0.3
483
Tumor
0.3
477
Tumor
0.2
383
Tumor
0.2
737
Tumor
0.2
881
Tumor
0.2
492
Normal
0.2
647
Tumor
0.2
553
Tumor
0.2
443
Tumor
0.2
112
Tumor
0.2
917
Tumor
0.1
671
Tumor
0.1
538
Normal
0.1
1045
Tumor
0.1
267
Tumor
0.1
285
Tumor
0.1
367
Tumor
0.1
778
Normal
0.1
185
Tumor
0.1
421
Tumor
0.1
493
Tumor
0.1
297
Tumor
0.1
473
Tumor
0.1
221
Tumor
0.1
344
Normal
0.1
953
Tumor
0.0
952
Normal
0.0
883
Tumor
0.0
327
Tumor
0.0
967
Tumor
0.0
137
Tumor
0.0
124
Normal
0.0
311
Tumor
0.0
257
Tumor
0.0
923
Tumor
0.0
715
Tumor
0.0
261
Tumor
0.0
554
Normal
0.0
131
Tumor
0.0
313
Tumor
0.0
1043
Tumor
-0.1
878
Normal
-0.1
755
Tumor
-0.1
943
Tumor
-0.1
744
Normal
-0.1
1028
Normal
-0.1
913
Tumor
-0.1
874
Normal
-0.1
474
Normal
-0.1
951
Tumor
-0.1
217
Tumor
-0.1
145
Tumor
-0.1
914
Normal
-0.1
431
Tumor
-0.1
463
Tumor
-0.1
746
Normal
-0.1
924
Normal
-0.1
433
Tumor
-0.1
981
Tumor
-0.1
567
Tumor
-0.1
161
Tumor
-0.1
218
Normal
-0.2
365
Tumor
-0.2
695
Tumor
-0.2
814
Normal
-0.2
487
Tumor
-0.2
361
Tumor
-0.2
516
Normal
-0.2
125
Tumor
-0.2
111
Normal
-0.2
452
Normal
-0.2
423
Tumor
-0.2
146
Normal
-0.2
861
Tumor
-0.2
518
Normal
-0.2
925
Tumor
-0.2
342
Normal
-0.2
451
Tumor
-0.2
741
Tumor
-0.2
536
Normal
-0.2
911
Tumor
-0.2
851
Tumor
-0.2
368
Normal
-0.2
396
Normal
-0.2
386
Normal
-0.2
224
Normal
-0.2
392
Normal
-0.2
983
Tumor
-0.2
498
Normal
-0.2
187
Tumor
-0.2
526
Normal
-0.2
574
Normal
-0.2
434
Normal
-0.2
114
Normal
-0.3
142
Normal
-0.3
391
Tumor
-0.3
213
Tumor
-0.3
956
Normal
-0.3
816
Normal
-0.3
546
Normal
-0.3
1026
Normal
-0.3
727
Tumor
-0.3
123
Tumor
-0.3
195
Tumor
-0.3
376
Normal
-0.3
191
Tumor
-0.3
268
Normal
-0.3
663
Tumor
-0.3
188
Normal
-0.3
186
Normal
-0.3
426
Normal
-0.3
867
Tumor
-0.3
966
Normal
-0.3
271
Tumor
-0.3
866
Normal
-0.3
615
Tumor
-0.3
721
Tumor
-0.3
138
Normal
-0.3
696
Normal
-0.3
394
Normal
-0.3
341
Tumor
-0.4
412
Normal
-0.4
921
Tumor
-0.4
312
Normal
-0.4
448
Normal
-0.4
444
Normal
-0.4
742
Normal
-0.4
384
Normal
-0.4
447
Tumor
-0.4
136
Normal
-0.4
467
Tumor
-0.4
513
Tumor
-0.4
533
Tumor
-0.4
415
Tumor
-0.4
873
Tumor
-0.4
387
Tumor
-0.4
524
Normal
-0.4
685
Tumor
-0.4
965
Tumor
-0.4
212
Normal
-0.4
148
Normal
-0.4
436
Normal
-0.4
262
Normal
-0.4
126
Normal
-0.4
353
Tumor
-0.4
211
Tumor
-0.4
916
Normal
-0.5
1027
Tumor
-0.5
1022
Normal
-0.5
132
Normal
-0.5
698
Normal
-0.5
422
Normal
-0.5
286
Normal
-0.5
738
Normal
-0.5
563
Tumor
-0.5
214
Normal
-0.5
568
Normal
-0.5
922
Normal
-0.5
728
Normal
-0.5
411
Tumor
-0.5
331
Tumor
-0.5
272
Normal
-0.5
484
Normal
-0.5
414
Normal
-0.5
494
Normal
-0.5
366
Normal
-0.5
362
Normal
-0.5
1031
Tumor
-0.5
228
Normal
-0.5
938
Normal
-0.5
258
Normal
-0.5
352
Normal
-0.5
976
Normal
-0.6
456
Normal
-0.6
232
Normal
-0.6
862
Normal
-0.6
298
Normal
-0.6
424
Normal
-0.6
227
Tumor
-0.6
818
Normal
-0.6
982
Normal
-0.6
354
Normal
-0.6
786
Normal
-0.6
196
Normal
-0.6
385
Tumor
-0.6
388
Normal
-0.6
162
Normal
-0.6
314
Normal
-0.6
328
Normal
-0.6
472
Normal
-0.6
918
Normal
-0.6
1016
Normal
-0.6
364
Normal
-0.6
413
Tumor
-0.6
868
Normal
-0.6
968
Normal
-0.6
627
Tumor
-0.6
642
Normal
-0.6
514
Normal
-0.6
864
Normal
-0.6
278
Normal
-0.6
446
Normal
-0.6
464
Normal
-0.6
618
Normal
-0.7
858
Normal
-0.7
284
Normal
-0.7
686
Normal
-0.7
416
Normal
-0.7
756
Normal
-0.7
358
Normal
-0.7
468
Normal
-0.7
462
Normal
-0.7
428
Normal
-0.7
564
Normal
-0.7
716
Normal
-0.7
432
Normal
-0.7
528
Normal
-0.7
222
Normal
-0.7
332
Normal
-0.7
488
Normal
-0.7
172
Normal
-0.7
466
Normal
-0.7
815
Tumor
-0.7
882
Normal
-0.7
824
Normal
-0.7
1042
Normal
-0.7
662
Normal
-0.7
636
Normal
-0.7
724
Normal
-0.7
884
Normal
-0.7
558
Normal
-0.7
964
Normal
-0.7
1044
Normal
-0.7
357
Tumor
-0.7
852
Normal
-0.7
534
Normal
-0.8
714
Normal
-0.8
722
Normal
-0.8
665
Tumor
-0.8
465
Tumor
-0.8
571
Tumor
-0.8
128
Normal
-0.8
572
Normal
-0.8
351
Tumor
-0.8
672
Normal
-0.8
356
Normal
-0.8
1046
Normal
-0.8
957
Tumor
-0.8
926
Normal
-0.8
944
Normal
-0.8
958
Normal
-0.9
723
Tumor
-0.9
954
Normal
-0.9
743
Tumor
-0.9
537
Tumor
-0.9
661
Tumor
-0.9
1013
Tumor
-0.9
478
Normal
-0.9
617
Tumor
-0.9
435
Tumor
-0.9
648
Normal
-0.9
664
Normal
-1.0
481
Tumor
-1.0
912
Normal
-1.0
482
Normal
-1.0
666
Normal
-1.0
641
Tumor
-1.1
1032
Normal
-1.1
231
Tumor
-1.1
171
Tumor
-1.1
628
Normal
-1.2
1014
Normal
-1.2
978
Normal
-1.3
616
Normal
-1.3
127
Tumor
-1.4
984
Normal
-1.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.